Notechis scutatus (mainland tiger snake): 113417077
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Entry
113417077 CDS
T09026
Symbol
ARID1B
Name
(RefSeq) AT-rich interactive domain-containing protein 1B isoform X1
KO
K11653
AT-rich interactive domain-containing protein 1
Organism
nss
Notechis scutatus (mainland tiger snake)
Pathway
nss03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
nss00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
113417077 (ARID1B)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
nss03000
]
113417077 (ARID1B)
03021 Transcription machinery [BR:
nss03021
]
113417077 (ARID1B)
03036 Chromosome and associated proteins [BR:
nss03036
]
113417077 (ARID1B)
Transcription factors [BR:
nss03000
]
Eukaryotic type
Helix-turn-helix
ARID
113417077 (ARID1B)
Transcription machinery [BR:
nss03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
113417077 (ARID1B)
Chromosome and associated proteins [BR:
nss03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
113417077 (ARID1B)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
BAF250_C
ARID
Motif
Other DBs
NCBI-GeneID:
113417077
NCBI-ProteinID:
XP_026531069
Ensembl:
ENSNSUG00000015879
UniProt:
A0A6J1UTU8
LinkDB
All DBs
Position
Unknown
AA seq
1586 aa
AA seq
DB search
MPSQTPGTQSESSSHPALSQSPMPQDRGFMTSIQRNPQLSQYASQQTGPSMSPHPSPGGQ
MHSGIGSFPQSNSSGAYGTQMSQYGPQGNYSRQPTYSGVTNAGYSGPGPGMGINASNQMH
GQGPGQPCGTIPLGRMPSTGMQSRPFPGNMSSMTPSSPGMAQQGGPGMGPPMPTVNRKAQ
EAAAAVMQAAANSAQSRPPYIRSPAYPSQSGAGGRPMFSSQHPNYGNAQGPMMHQPDQYG
QGSFPVINQSGIMGSSSPYTQPMNSNSSLMNPQASPYSMAPNMVNSSTAPMGLADLMTQG
ESKLPVPLKPDGKEEGPPQPESKKDSYSSQGISQPPTPGNLPVPSPMSPSSASISSFHGD
ESDSIGSPGWPKTPSSPKSSSSNTTGEKITKMYELGTEPERKVWVDRYLNFMEERGTPVA
GLPAVGKKPLDLFRLYVCVKEIGGLAQVNKNKKWRELATNLNVGTSSSAASSLKKQYIQY
LFAFECKIERGEEPPPEVFSTGDTKKQAKIQPPSPANSGSLQGPQTPQSTGSNSMTEVPS
DLKPPTPASTPHGQMTPTQSSRNSSVSVHDPFSDISDSTYAKRNSMTPNAPYQQSMNMPD
MMGRMPYEPNKDPFGGMRKVPGNSEPFMAPGQMPNSGMQDMYSQSPAATMSNMGIGQRQQ
FPYGSGYDRRHEPYGPQYPMQAPPSGQPPYGTHQSGMFPQQQNYKRHMDGMYGPPAKRHD
GDMFNMQYSNQQQEIFNQYSSAYSGPDRRPIQGQYPYPYNRERMQGPGQMPQHGIPPQMI
GGPMQTSASSESPQQNMWPTRNDMSYPYQNRQGPGGPAQAPPYPGMNRTDDMMVPDQRIN
HESQWPSHVNQRQPSYMSSSASMQPITRPPQSSYQTPPSMPNHISRAPSPASFPRSHENR
MSPSKSPFLSSMKMPKVMPTLPVSQVTGPPMQPPSSIRREVTFPPGSVEASQPILKPRRK
ITSKDIVSPEAWRVMMSLKSGLLAESTWALDTINILLYDDSTVATFNLSQLSGFLELLVE
YFRKCLIDIFGILMEYEVGYPGPKLQDHNSFPNEDGQSATEDVRKEEENNDECIDYFDDL
EDEEDEEEEDETENTEEGKNTLVAPPDAILDPSEKPKQASKFDKLPIKIVKKNNLFVVDR
SDRLGHVQEFNSGLLHWQLGGGDTTEHIHTHFESKMEIPACRRPSLSVSSGKKKNVEGKG
ESEEQQDKSISATIDDVLSARPGALSEDPDSNSQTDSNKFPFGIHQVKSHRNIKLLEDEP
RSRDETPLCTITHWQDSLAKRCICVSNIVRSLSFVPGNDVEMSKHPGLVLILGKLILLHH
EHPERKRTPQTYEKEEEVDKGVACSKDEWWWDCLEVLRDNTLVTLANISGQLDLSAYTES
ICLPILDGLLHWMVCPSAEAQDPFPTVGPNSILSPQRLVLETLCKLSIQDNNVDLILATP
PFSRQEKLYATLVRYVGERKNPVCREMSMALLSNLARGDTLASRAIAVQKGSIGNLISFL
EDGVTMAQYQQSQHNLMHMQPPPLEPPSVDMMCRAAKALLAMARVEENRSEFLLHEGRLL
DISISAVLNSMVASVICDVLFQIGQL
NT seq
4761 nt
NT seq
+upstream
nt +downstream
nt
atgccatcacagactcctggtacccaatcagaatctagctcccatcctgccttgagccaa
tccccaatgccacaggatcgaggttttatgacaagcattcaaagaaaccctcaattgtca
caatatgcatctcagcagactggaccttctatgtcaccccatccttcacctggaggtcaa
atgcattctggaattgggagctttccacaaagtaattcaagtggtgcttatggaactcag
atgagccagtatgggccacaagggaactactccagacagccaacatactctggagtgacc
aacgcaggttacagtggaccaggacctggtatgggtataaatgccagcaaccagatgcac
ggacagggtccaggccagccttgtggtaccattcccttgggacgaatgccatcaactggg
atgcaaagcagaccgtttcctggaaatatgagcagtatgacacccagttctccgggcatg
gctcagcaaggaggccccgggatgggaccacccatgccaactgtgaaccgtaaggcccag
gaggcagctgcagcagtgatgcaagctgctgccaactccgcccagagcaggccaccatac
attcggtcgcctgcttatcccagccagtctggggctggcggacgccccatgttttcttca
cagcaccccaactatggcaacgctcagggtcccatgatgcatcagcctgaccagtacggg
caaggcagttttcctgtcatcaatcagagtggcattatgggatccagctctccatacacc
caaccaatgaacagcaactcaagtctgatgaaccctcaagcttctccttacagcatggca
cctaacatggtgaacagttccacagcacctatgggtcttgcagatttgatgactcaaggt
gagtccaaattgcccgttcctctcaaaccagatggaaaagaagaaggacctccccagcca
gagagcaaaaaggatagctacagctctcagggtatttctcagcccccaaccccaggcaac
ctgccagtcccttccccaatgtccccaagttctgctagcatctcctcatttcatggagat
gaaagtgatagcattggcagcccaggctggccaaagactccatcaagccctaaatcaagt
tcctccaacacaaccggggagaagatcaccaaaatgtatgagctggggactgaaccagag
cggaaagtttgggtggatcgctatctcaacttcatggaagaaaggggaacacctgtagct
ggtctccctgctgttggcaagaagccactggatctttttagactctatgtttgtgttaag
gagattggaggcttagcccaggttaataaaaataagaagtggcgtgagctagctaccaac
ctaaatgttggcacttcgagcagcgcagccagttccttgaaaaaacaatatattcaatac
ctctttgcctttgaatgcaagattgaacgaggggaggaaccccctccagaagtcttcagc
actggagatactaaaaaacaagctaagattcagccgccatctcctgcaaactcgggttct
cttcagggtccacagacccctcagtctacggggagcaattctatgacagaagtgccaagt
gacctcaagcctccaacaccagcgtccacacctcatggacagatgacacccactcagagc
agcagaaatagttcagtcagtgtacatgatcccttttcggatataagtgattccacatac
gcaaagcggaactccatgactccaaatgcaccctatcagcaatcaatgaatatgccagat
atgatgggaaggatgccctatgagccaaacaaggatccttttggtgggatgagaaaagtg
cctggaaatagtgaacccttcatggcccctggacaaatgcccaacagtggcatgcaggat
atgtacagccagagtcccgctgcaaccatgtccaacatgggcataggccaacggcaacag
tttccctatggaagtggttatgaccggaggcatgaaccatatggaccacagtatccaatg
caagctcctccttctggacaacccccctatggaacacaccaatcaggaatgtttccacag
cagcaaaactacaaacggcatatggatggcatgtatgggcctccagcaaaacgtcatgat
ggagatatgtttaacatgcagtacagcaaccaacagcaggagatatttaaccagtatagc
agtgcttactctggaccagacaggagacccatccagggacagtatccatatccttataac
agagaaaggatgcagggtcctggacaaatgccacaacatggaatacctccgcagatgatt
ggtggccctatgcagacatcagcttccagtgaaagcccccaacaaaacatgtggcccaca
agaaatgatatgtcttacccatatcagaacaggcaaggccctgggggccctgcacaggcc
ccaccttatccagggatgaatcgtactgatgatatgatggtacctgaccagagaataaac
catgaaagccagtggccttctcatgtcaaccagcgacagccttcttacatgtcatcctct
gcttccatgcagcctattactcgacctcctcagtcatcctatcagacgccaccatcaatg
ccaaaccacatatctcgagctcctagccctgcatctttcccacgctctcatgaaaatcgt
atgtctcccagtaaatctccattcctatcctctatgaagatgccaaaagttatgcctact
cttccagtctcgcaggtcacaggtcctccaatgcagccaccatcatctattaggcgggaa
gtcacttttcctccaggttcggtggaagcatcccaaccaattttaaaaccaaggcgaaag
attacctcaaaagatattgtgagtccggaagcctggcgagtgatgatgtctcttaaatca
ggtcttcttgcagaaagtacttgggcattagacactattaacattcttttgtacgatgat
agtacggttgctacgttcaatctctcacagttatctggttttcttgagctgttggtggaa
tattttagaaaatgcctgattgatatttttgggatccttatggaatatgaagtgggatat
ccaggaccaaaactgcaagatcataattcatttccgaatgaggatgggcagtctgcaacg
gaggatgtcaggaaagaggaagaaaacaatgatgaatgtatagattactttgatgacctg
gaagatgaggaggacgaagaggaagaagatgaaactgagaacacagaagaaggaaagaac
actcttgtagctccacctgatgccattcttgatccaagtgagaagccaaaacaagccagt
aagtttgacaagttgccaataaaaattgtaaagaaaaacaacttatttgttgtcgaccga
tctgatcggctggggcatgttcaggaattcaacagtgggcttcttcattggcaacttggt
gggggtgatacaactgaacacattcatacccattttgagagtaagatggagattcctgct
tgcaggcggccatctctatcagtctcctcaggtaaaaagaagaacgtagaggggaaagga
gaatctgaggaacagcaagacaaaagcatatcggccactattgatgatgtcttgtcagct
cgtccgggagcattgtctgaagaccccgactccaattctcagacagatagtaataaattt
ccatttgggatccatcaagtgaaaagtcatcgaaatatcaaactgctggaagatgagcca
cggagtcgagatgagactcctctatgtaccattacccactggcaagattctttggccaaa
cgttgcatctgtgtttcaaatattgtccgcagcttatcttttgtgcctggcaatgatgtg
gaaatgtctaaacatccaggcttggtgctaatcttgggaaagttgattcttcttcatcat
gaacacccagaaagaaagcgtacaccacagacatatgaaaaagaggaagaagtggacaaa
ggggtggcctgcagcaaggatgagtggtggtgggactgccttgaggtcttgagggataat
acattggtcacactagccaacatttctgggcagctagacttatctgcttatacagaaagc
atctgtttgccaattttggatggcttactgcactggatggtgtgcccatcggcagaggca
caagatccttttccaactgtggggcccaactcaatcctttcgcctcagagacttgtactg
gaaaccctgtgtaaactcagtatccaagacaataacgtggacctcatattggccacgccc
ccattcagtcgtcaggagaaactgtatgctactttagttaggtacgttggggaacgcaaa
aatcctgtctgccgagaaatgtcaatggcgctcttatcaaaccttgcccgaggggacacg
ttagcgtcaagggcaatagctgtgcagaagggaagcattggaaacttgataagcttcctt
gaggatggggtcacgatggcccagtaccagcagagccagcataaccttatgcacatgcag
cctccgcctctggagccacctagtgtggacatgatgtgcagggcagccaaggccttgttg
gccatggcccgggtggaggaaaaccgctccgaattccttttacatgagggccgcttgctg
gatatctcaatatcagctgtcctgaactctatggttgcatctgtcatctgtgatgtactc
tttcagatagggcagttatga
DBGET
integrated database retrieval system
