Notechis scutatus (mainland tiger snake): 113417105
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Entry
113417105 CDS
T09026
Symbol
RFC1
Name
(RefSeq) replication factor C subunit 1
KO
K10754
replication factor C subunit 1
Organism
nss
Notechis scutatus (mainland tiger snake)
Pathway
nss03030
DNA replication
nss03410
Base excision repair
nss03420
Nucleotide excision repair
nss03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
nss00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
113417105 (RFC1)
03410 Base excision repair
113417105 (RFC1)
03420 Nucleotide excision repair
113417105 (RFC1)
03430 Mismatch repair
113417105 (RFC1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
nss03032
]
113417105 (RFC1)
03400 DNA repair and recombination proteins [BR:
nss03400
]
113417105 (RFC1)
DNA replication proteins [BR:
nss03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
113417105 (RFC1)
DNA repair and recombination proteins [BR:
nss03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
113417105 (RFC1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RFC1
AAA
BRCT
PTCB-BRCT
AAA_22
BRCT_2
AAA_30
AAA_14
Rad17
RuvB_N
AAA_5
AAA_17
Zeta_toxin
AAA_16
nSTAND3
AAA_33
AAA_19
NPHP3_N
AAA_18
TIP49
AAA_7
RNA_helicase
NTPase_1
Motif
Other DBs
NCBI-GeneID:
113417105
NCBI-ProteinID:
XP_026531105
Ensembl:
ENSNSUG00000016106
UniProt:
A0A6J1UL90
LinkDB
All DBs
Position
Unknown
AA seq
1143 aa
AA seq
DB search
MDIRKFFEVVTPGKKPECGIVRKEKPQNKERNSGGTSTLKEIKVKNSSHEEDIKRKQVNK
KKRIIYDSDSEEEVPLIKKSKPPDRKLPSKPAKLLKTEPVVYVSETDEDEDFVKKPPPKV
KLLETSVKMIHRTTGTSQPDSKPKVKNKPLSPVKLTPISVLDYFGTGSIQQSEKKLVSSK
RKESWQSKDPTINDEAIAKELQLEENSQRERQLHEDEEFAQTLAMLDETPRKKKPRKEEF
QQSKSGEAGKNKQAQKGKATASALNSQPYSAKDQIHSKSAGGLNLHPESSATKEEVDWGN
KRGSPKASSRSTPLKQQAEAIKTENGTSKGENLRKGTPAGKTISPKTKTPIKVKVSPEQP
KSVSPEDSVEKKRINYTAYRSFLNREGPKALGSKEIPQGGENCLEGMTFVITGILESIER
DEAKSLVERYGGKVTGNISKKTNYLVKGRDCGMSKCEKASALGTKIIDEDGLFDLIRNTP
GKRSKYEIAAEMEAKRTKSKVEKTSPETKAGKRKLSPTKPDSDSRKKTPFLVENTEPFKP
IKQEAGPVRRGLDFLEEEEEEEEERKKKQVPKAEKSSAHETDQNREVLLWVDKYKPTSLK
TIIGQQGEQSCANKLLRWLKNWQKNSFEDKQVKSSKFGSKDDGASSKAALLSGPPGVGKT
TTASLVCQELGLSYVELNASDTRSKKSLKEVVAESLNNTSIKGFCSGASRSVSAKHVLLM
DEVDGMAGNEDRGGIQELIDLIKHTKIPIICMCNDRNHPKIRSLVHYCFDLRFPRPRVEQ
IKGAMMSIAFKEGLKVPPPAMNELILAANQDIRQVLHNLSMWCARDKTLTYDGVKEDASK
AKKDIKLGPFDVVRKVFANGQETSRMSLIDKADLFFHDYSLGPLFVQENYIHVKPAAARN
DLKKELILLSKTADSICDGDLVDRQIRARQNWSLLPTQAIYSSVLPGELMRGNLQEFPSF
PSWLGKFSSTGKHDRVVQELSMHMSLRTHASKRDVNLDYLSYLRDAVVSPLARQGSDGVQ
DAVAFMDSYCLLKEDVENLMEVTSWAGKPSVFSKLDSKVKSAFTRTYNKVAHLTPYSLQL
APKSKRAGSVDMEMSEELELNEPETDQGSLENDAMIKKKTKPAKQPKAERKEEKKKGKSK
KKS
NT seq
3432 nt
NT seq
+upstream
nt +downstream
nt
atggatatccgtaaattctttgaagttgtaactccaggaaagaaacctgaatgtggcatt
gtgagaaaggagaaaccccagaataaagagaggaattcagggggaacgtcaacgctgaaa
gaaatcaaggtgaaaaattcatctcacgaagaggatatcaagcgaaaacaggtgaacaag
aaaaaaaggataatctatgattcagattctgaagaggaggtaccattaatcaaaaaatct
aagccgccagacagaaagttaccttctaaacctgctaagctgctaaagacggagcctgtg
gtttacgtttcagaaacagatgaagatgaggactttgttaagaaaccccctccgaaagtt
aaactgctggaaacgtcggtgaaaatgattcacagaacgacgggaacatcccagccagat
tccaaaccaaaagtcaaaaataaacctttatctcctgtaaaactgacgcccatatccgtc
ctggattactttgggactgggagcatccaacagtcggagaaaaagctggtctcaagcaaa
cgaaaagaatcttggcaaagcaaggatcccaccatcaacgatgaggctattgctaaagaa
ctacagctggaagagaattcgcagcgggaaagacaattgcacgaagatgaagaatttgca
caaacattggctatgttggatgagacgcccagaaagaaaaagccgcgaaaagaagaattt
caacagtcaaaatcgggcgaagcaggaaaaaacaaacaagctcagaaagggaaagctacc
gcttccgccttaaattcccaaccttattccgcaaaggatcagattcattccaaaagtgct
ggggggttgaatcttcaccctgaatcttctgctacgaaggaagaggtggactgggggaat
aagaggggttcacccaaggcttcctccaggtcaacgccactcaagcaacaagcagaggct
atcaaaaccgaaaatgggacctcaaagggggagaacctcaggaaaggaactccagcagga
aaaaccatttcgcccaaaaccaagacgccgataaaggtgaaggtttctcccgaacaaccc
aagtccgtcagtcccgaggactctgtggaaaagaagcggataaattacacggcctacaga
agcttcctcaatcgagaaggtccgaaggccctcggctctaaagaaataccccaaggcggc
gaaaattgcttggaaggcatgacgtttgtgattaccggaatcttggaatcgatcgaacgg
gatgaggccaagtctctggtcgagcgctacggggggaaagtcaccggaaacatcagcaag
aagacaaactaccttgtgaaagggcgtgactgtggcatgtccaagtgtgaaaaggcatcg
gctttagggacgaaaataatcgacgaagatggcttgtttgacctgatacgaaatactcca
ggcaagaggtccaagtatgaaatagcagctgaaatggaggccaagagaacaaagtccaag
gttgaaaaaacgtccccggaaacgaaagccggcaaaaggaaactgagccctacaaagccg
gattccgactcccggaaaaaaacacctttccttgtggaaaacacggagccttttaaaccc
atcaaacaggaagccgggccagtaaggagggggctggacttcctggaggaggaggaggag
gaggaggaggagaggaagaagaagcaagttcccaaggcggaaaagagctcggctcatgag
acggatcaaaacagagaagtgttattgtgggtggacaagtacaagcctacctctctcaaa
acgatcatcgggcaacaaggcgaacagagctgcgccaataaactcctgcgttggcttaaa
aactggcagaagaattcttttgaagacaaacaggtcaaatccagtaagtttggaagcaaa
gatgatggcgctagttccaaagcagctttgctttctgggcccccgggagtaggcaaaacc
acaacggcatcgctagtttgtcaggaactcggtttgagttacgtggagctgaacgcgagt
gacacccgcagcaagaaaagcctgaaagaggtggtggccgaatcgctgaataacaccagc
atcaaaggattctgctctggggcgtcacgttctgtcagtgcaaaacacgtccttctaatg
gatgaggtggatgggatggctggcaatgaagacagaggtgggatacaggagctaattgac
cttattaagcacacaaaaattccaataatttgcatgtgtaacgaccggaaccatcccaag
atccgttctctggtccactattgctttgaccttcgttttccaagaccgagggtggaacag
atcaagggcgctatgatgtccattgctttcaaagaagggttaaaggttccaccaccggca
atgaacgaactcattttggcagctaatcaggatatcagacaggtgttgcataatctcagc
atgtggtgtgccagagacaaaaccttgacttatgatggtgtcaaagaggacgccagtaaa
gccaaaaaggatattaagctgggtccttttgatgtcgtgaggaaggttttcgccaacgga
caagagacttctcgcatgtctctcatagacaaggcagacctgttcttccacgattactct
ctgggacccctctttgtccaagaaaactacatccacgtcaagccagccgctgctagaaac
gacttgaagaaagaactcatcttacttagcaaaaccgccgacagtatttgcgatggcgat
ttagttgaccgccagatacgcgctcgacaaaactggagccttctgcccactcaggccatt
tattcgagcgtcctgcctggggagctgatgagaggcaatttgcaagaatttccaagtttt
ccgagttggctgggaaaattctcatccactggaaagcatgaccgcgtcgtccaggagctt
tctatgcatatgagtctcagaacgcacgcgagtaagagagacgtcaatctggactacctg
tcctatctgcgagatgcagtggtgagtccgttggctcgccaaggctccgacggagtccag
gatgctgttgccttcatggattcttactgcttgttgaaggaagatgtcgaaaacctcatg
gaggtcaccagctgggcaggcaagcccagtgtgttttccaaattggattccaaggttaaa
tcggcgttcacgcgcacctacaataaagttgcacatcttacgccatactccctgcaactt
gcaccaaagtcgaagcgagcgggctcagtggacatggaaatgagtgaagaactggaactg
aacgaacccgagaccgatcaagggagcctggaaaacgatgcaatgattaagaaaaagacc
aaacctgccaagcaaccaaaagcagaaagaaaggaagaaaagaaaaaaggaaaatcaaag
aaaaagagctaa
DBGET
integrated database retrieval system
