Notechis scutatus (mainland tiger snake): 113417538
Help
Entry
113417538 CDS
T09026
Symbol
TDRD12
Name
(RefSeq) putative ATP-dependent RNA helicase TDRD12
KO
K18409
ATP-dependent RNA helicase TDRD12 [EC:
5.6.2.5
]
Organism
nss
Notechis scutatus (mainland tiger snake)
Brite
KEGG Orthology (KO) [BR:
nss00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
nss03036
]
113417538 (TDRD12)
Enzymes [BR:
nss01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.5 RNA 5'-3' helicase
113417538 (TDRD12)
Chromosome and associated proteins [BR:
nss03036
]
Eukaryotic type
Gene silencing
piRNA pathway
113417538 (TDRD12)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TUDOR
DEAD
CS
TP_methylase
Urotensin_II
Motif
Other DBs
NCBI-GeneID:
113417538
NCBI-ProteinID:
XP_026531758
UniProt:
A0A6J1UT92
LinkDB
All DBs
Position
Unknown
AA seq
1321 aa
AA seq
DB search
MIEVIILKIENPDCFWVYIIGGRKIVVNEMEYETLQTEMNQFYNKHYRCVDAKPCALEEG
QVCAVYCEELKSWCRAVVNSIISYTDYYIAECFLVDYAKTIPVNTEKICVVVKSFVRLPY
RATKFRLYCVKPVTLRVNYYNDNSEIVPANKWDIAAIQYFQNLLNEATQVEAKICAVEED
NFAVYLYVTIKGEKVCVNDALVAKNYACYELEKTNQKRDSEGTKSRSEEKNPVRLLWPML
LRESKVSEMGAAPVCDNSEIAELTHFPEINLHKPKQPDVVVPVSPLKQGITFSVPSGMQT
VSNLPKSSTKIQERENDLYKNNLGVKLLQFLNPDPLKIATDQETEELKLNITTTCLPVVL
SNKIEPCSSLETAPLFPALKKELLRKQFQGPNHVQSYSWPAIARGYDSLIISSESNPLSY
LLPIITFLQSRNCYISLSARQGPVALVICPGQKRAELVFEHLKMYSHCSRPLHPMLLVLG
MKKEEIKSVRIPRGCEIVVTTPPIFLRLLEHHSLLFLRLCHLVLDEVDVLFSDAKEQTLT
ILQYYKSNLSVEEKEFVPQQIVAVGNHWDKNIEVLTKEFMNDPYIVITSMGEAAIYGKVQ
QVVQLCLECDRISTLLQTLDFTPTDAQKTLIFTSCVEERDMVYKAVESISIFCLKMNPGI
GFHSDYIVEQWNKTISPGTHVVLVLTDDCTAAVKFTDATRVIHFSFPPTPRIFGARLHGL
SANFQNSVEKSPSLGKEESKAKSILLLTEKNACHAVGVLNYLERAEAFVPPDLYNFTRGV
LEAKEEKRSGQPFCSSVKAYGICKNKKRCPDRHRVNLQIDVPSKVADEALQTGGIITILP
LFIVDATNYLGRVVGKWGNLYAALETEMKDYYQESSNCTPADKVEKLAMYGLREENSFHR
VQVLDVEQKEEPSAFYNVDIKYIDEGRTGYVQNHHLLSLPEQFQALPPQAVEFIVCRVKP
IDNEAEWHPKVSRCINDKIRGKPHEAKVALVLGNTIWVDPVIRVTKLQDLKTSINEYNIR
SEILSTGLGVDNPEHIQELEKLFNEAEIPHEKKEKPALLNPPTDERSEEAEPVEQKVSNP
ATLSSETSSKQPLPVVQKSQHSQDIIHDGYSQVSLENHCNETAQNKNNEDILQISTKCFH
PTIKWFDKQDAVVVKVKLQNISNYDCRIFEQRIAFSASANGKFYLANMELQRSILREKST
CVLKGDEPTILLVKVKKEPWCNLLKEKNHHVSFDFDYLDDNEERSPFCIGKQFIVLCAVS
SRLKGWEALLYFLQTLLGKTDYTVYFMGCAKKKRRRKKNLPKTVIQRVIYPLVNYILAFS
L
NT seq
3966 nt
NT seq
+upstream
nt +downstream
nt
atgattgaagtcataatactgaagattgaaaatccagattgcttttgggtctacataata
ggaggcagaaaaattgtagtcaatgaaatggaatatgaaacacttcagactgaaatgaat
caattctataacaaacattatcgatgtgtggatgccaagccttgtgcactggaagaggga
caggtttgtgctgtttactgtgaggaactgaaatcttggtgcagagctgttgttaattca
atcatatcatacacggattattacattgcagaatgtttccttgtggactatgccaaaact
attcctgtgaacactgaaaagatctgtgtggtcgtaaaatcatttgtgaggctgccttat
agagctacaaagtttaggttgtactgtgtcaaaccagtaacactacgtgtcaactattac
aatgacaattctgagatagtgcctgctaacaaatgggatattgcagcaatccagtacttc
caaaacctcctgaatgaagccactcaagtggaggccaagatatgtgctgttgaagaggat
aattttgctgtctatctttatgtcacaataaaaggtgaaaaggtgtgtgtgaacgatgct
cttgttgcaaagaactatgcttgctatgaacttgagaaaacaaaccagaaacgagattca
gaaggtaccaaatctcgttcagaggagaagaatcctgtaaggctgctgtggccaatgtta
ctacgagaatctaaggtttctgagatgggtgctgctcctgtttgtgataattctgagata
gcagagttgacacatttcccagaaattaacttacataaaccaaaacagcctgatgtagtg
gtgcctgtttcccctttgaagcaaggaataactttttctgtaccatcaggcatgcaaaca
gtcagcaacttgcctaagtcaagtaccaaaatacaggaaagggagaatgatctctacaag
aacaaccttggggtgaagcttctacagtttttaaaccctgatcctctgaaaattgccact
gatcaagaaactgaggagctgaagctgaatatcaccactacatgtcttcctgttgtgctg
agtaataaaattgaaccatgttcatctctagaaaccgcaccactgtttccagctttaaaa
aaggagcttttaagaaagcaattccaaggacctaatcatgtacagtcttactcctggcct
gcaatagcacgtggatatgattcgcttattatctcttctgaaagtaacccactttcatat
cttctgccaatcattacatttttgcagtcaagaaattgctacatatcgttatcagctaga
caaggtccagtagcattagtcatatgccctggccagaagagagcagaactggtatttgag
cacctgaaaatgtacagccattgctccaggcctcttcacccaatgttgcttgtcctggga
atgaaaaaggaagaaatcaagagtgtaagaattccaagaggatgtgaaatcgtggtaaca
accccacctatctttttgcggctgctcgagcatcatagtttactcttccttaggttgtgt
catctggtgttggatgaagttgatgtattgttctctgatgccaaggagcagacacttact
attttacaatactacaaatctaacctgagcgttgaagaaaaggagtttgtgccgcagcag
attgttgctgttggaaaccactgggacaaaaatatagaagttttaacaaaagaattcatg
aatgatccatatattgtaatcacctccatgggagaagctgccatatatgggaaagtgcaa
caggttgtgcagctctgccttgagtgtgaccggatctctactttacttcaaacgttagat
tttacccctacagatgctcagaagacgctgatttttacaagttgtgtggaagaaagagac
atggtatacaaggcggtagagagcatttcaatcttttgcttgaaaatgaacccgggaatt
ggatttcattctgattatattgtagagcagtggaacaaaacaatcagccctggaacccat
gttgtattggttttaaccgatgactgcacagcagctgtaaaatttacagacgcaacccgt
gtcattcatttcagctttccaccaactccaagaatctttggtgcccgcttacatggcctg
tctgccaacttccaaaattcagtagaaaagagtccatcactgggaaaagaagagagcaaa
gccaaatccatcttgctgttgacagagaaaaatgcctgccatgcagttggagtgttgaat
tatttggaacgggcagaagctttcgtcccccctgacttgtacaactttaccaggggagtg
ttggaagccaaagaggaaaagagaagcgggcagccgttttgttcttccgttaaggcctat
ggaatatgcaaaaataaaaaacgctgcccagatcgccatcgcgttaaccttcaaattgat
gtgccctcaaaagtagctgacgaagctctgcaaacaggtggaattataacaatactgcct
ctttttattgtggatgccacaaactacttaggccgtgtggtagggaaatggggtaatctc
tacgcagctcttgaaacagagatgaaggactattatcaggaatctagcaattgtacccca
gcggacaaagtggagaagctggcaatgtatggactgcgggaagaaaattctttccacagg
gtccaagtgctagacgtggaacaaaaagaagagcccagtgcgttttacaacgttgacatc
aagtacatagatgaaggcagaactggctatgttcaaaatcatcacttgcttagtttacca
gaacaatttcaagcgttgcctcctcaggctgtggaattcatagtttgtagggttaaaccc
attgataatgaagcagaatggcatccaaaagtatccagatgcattaatgacaaaatcaga
ggaaaaccacatgaagccaaagtagctcttgtcctgggaaatacaatttgggtagatccg
gtgattcgagtcactaaacttcaagacctgaaaacttcaatcaacgaatataatattcgc
tctgaaatcctatctactggattgggagtggacaatcctgagcatatacaggaacttgag
aaattatttaatgaggctgaaataccccatgagaaaaaagagaagcctgcattattaaat
ccccccacggatgaaagaagtgaggaggctgaacctgttgagcagaaagtctcaaatcct
gcaactctgagctcagagacctcaagcaaacagcccttgcccgttgtacagaaatcgcag
cacagccaagatatcatccatgatggttattctcaagtgtctttagaaaatcactgtaat
gaaacggcgcaaaataagaacaacgaagacattctgcagatttcaactaaatgcttccac
ccaacaataaaatggtttgataagcaagacgctgttgttgtaaaggtaaaattgcaaaat
attagtaattacgactgcaggatttttgaacagaggatcgctttcagcgcttcggcaaac
ggcaaattttatttggccaatatggagctgcagagaagcatcctcagagagaaatcaacg
tgcgtccttaagggcgacgagcccaccatactccttgtaaaagtgaagaaggaaccttgg
tgcaacttgctaaaagagaaaaaccatcatgtatcgtttgactttgattacttggatgat
aatgaggaaagaagcccattctgtataggtaagcagttcattgttttatgtgcagtatct
tcacgtctaaagggatgggaagcccttctgtattttttgcaaactcttctggggaagaca
gattatactgtgtatttcatggggtgtgcgaagaagaagaggaggaggaagaagaatctt
ccaaagacagtgattcagagagtgatttatcctcttgttaattatatcttggcctttagt
ctttga
DBGET
integrated database retrieval system
