Notechis scutatus (mainland tiger snake): 113417696
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Entry
113417696 CDS
T09026
Symbol
HCFC1
Name
(RefSeq) host cell factor 1 isoform X1
KO
K14966
host cell factor 1
Organism
nss
Notechis scutatus (mainland tiger snake)
Pathway
nss03083
Polycomb repressive complex
nss04980
Cobalamin transport and metabolism
nss05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
nss00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
113417696 (HCFC1)
09150 Organismal Systems
09154 Digestive system
04980 Cobalamin transport and metabolism
113417696 (HCFC1)
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
113417696 (HCFC1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
nss01009
]
113417696 (HCFC1)
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
nss03036
]
113417696 (HCFC1)
03029 Mitochondrial biogenesis [BR:
nss03029
]
113417696 (HCFC1)
Protein phosphatases and associated proteins [BR:
nss01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
113417696 (HCFC1)
Chromosome and associated proteins [BR:
nss03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
NSL complex
113417696 (HCFC1)
HMT complexes
COMPASS/SET1 complex
113417696 (HCFC1)
MLL-HCF complex
113417696 (HCFC1)
Polycomb repressive complex (PRC) and associated proteins
PR-DUB complex
113417696 (HCFC1)
Mitochondrial biogenesis [BR:
nss03029
]
Mitochondrial quality control factors
Regulator of mitochondrial biogenesis
Other regulator of mitochondrial biogenesis
113417696 (HCFC1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Kelch_5
Kelch_3
Kelch_4
Kelch_1
Kelch_6
Kelch_2
fn3
ANAPC_CDC26
Motif
Other DBs
NCBI-GeneID:
113417696
NCBI-ProteinID:
XP_026531976
Ensembl:
ENSNSUG00000014919
UniProt:
A0A6J1UM67
LinkDB
All DBs
Position
Unknown
AA seq
2222 aa
AA seq
DB search
MASPVVPSGGSPTGVGATAGLLQPRWKRVIGWSGPVPRPRHGHRAVAIKELIVVFGGGNE
GIVDELHVYNTATNQWFIPAVRGDIPPGCAAYGFVCDGTRLLVFGGMVEYGKYSNDLYEL
QASRWEWKRLKAKMPKNGSTPCPRLGHSFSLVGNKCYLFGGLANDSEDPKNNIPRYLNDL
YILELRPGSGVGSWDIPITYGVLPPPRESHTAVVYTEKDNKKSKLVIYGGMSGCRLGDLW
TLDIDSLTWNKPNLRGVAPLPRSLHSATTIGNKMYVFGGWVPLVMDDVKVATHEKEWKCT
NTLACLNLDSMAWEPILMDTLEENTPRARAGHCAVAINTRLYIWSGRDGYRKAWNNQVCC
KDLWYLETEKPPPPSRVQLVRANTNSLEVSWGSVPTADTYLLQLQKYDIPAASSPAANPV
PSVPVNPPKSPAPAAAAPVPAVQPLAQMGITLLPQTTAVAAAPAAAAAAAAPAPPTTTTI
QVLPTVPTSPMPGPPPAAATATPRPQTVPAVLKVTGPQATTGAPLVTVRSAGLAGKGPVT
VTSLPAGVRMVVPTQSTQGTVIGSSSQMSGMAALAAAAAATQKIPPSSAPTMLTMPTAAT
IVKTVAMSPGTATLPTTVKVASSPVMTLLNKQVSNPATRMLKTAAAQVGTSVSSSTTNTP
TRPIITVHKSGTVTVAQQAQVMTTVVGGVTKTITLVKSPISVPGGSALISNLGKVMSVVQ
TKPVQTSAVTGQASTGPMTQIIQTKGPLPAGTILKLVTSADGKPTTIITTSQAGGTGTKP
TILGISSVSPNTTKPNTTTIIKTIPMSAIITQAGGTGVTSSTGIKSPITIITTKVMTAGT
GTPAKIITAVPKLTTSHGQQGVTQVVLKGAPGQPGTILRTVPMGGVRLVTPVTVSAVKPT
VTTLVVKGTTGVTTLGTVTGTVSTSLAGTGAHNTNASLATPITTLGTIATLSSQVINPAA
ITVSAAQTTLTAAAGLTTPTITMQPVSQPTQVTLITTPSGVEAQPVHDLPVSILASPTTE
QPTATVTIAEPGQGESQPNTVTLVCSNPPCETHDTGTTNTATTTVVGTLGGPAQLQFVCD
GQEGGGLQPNGRLVRICSNPPCEMHETGTTNTATTVLSAGQKICSNPPCETHETGTTNTA
TTSKTERAPSDPPCHTFQTSATGTTMTVKPIVGTGQLVCSNPPRETHETGTTNTATTTTS
NMDQGQPDDGQKELTNTSCQTKQTGSTSTTMTTKRDIPSEHPCAVQIVSFVPAAGSPSAA
SGTTVEKSNERPQALKKVQCESHHTHTTNTATTARSLMGQGQPDGEWMGSANPPCQTQQT
NSTSTTMSVKIDVPVQSSASCKTHSTDTKDTNLQVCSNPPCETHETGTTNAATVTTSNLG
ATQQVCSNPPCETHETGTTNAATVTTSNLGTTQQVCSNPPCEIHETGTTNTATTATSKIA
VGQQVCSNPPCETHETGTTNTATTTTSNLGAEQNEGAQHQHPPVTPPCETQQTNSTSTTM
TPSIGGDGAQSSSSAPAQCGNSELRKSPEREPPGIAGSLPQSSTPRVCSNPPCETHETGT
THTATTVTSSMGANQDQPPATNGQQGEPEIPVTESPAASSPNTAVVTTVPSTQIRAVTTV
TQSTPAPGPSVPNISSLTDVPAGEAVPPVETSDATSTDSLPAPSEPLQPSIEMQTAVATP
EPQGQAQVASAGTPPTEGPLGEPASHPELAPPTEEAPPTPAAPTQESVAMVVLPQATPAA
PPSSEVEQLALPQELMAESQAGTTTLMVTGLTPEELAVTAAAEAAAQAAATEEAQALAIQ
AVLQAAQQAVMGPGEAMDTSEAAATQAELGHLSSEGPEGQPTAIPIVLTQQDLAALVQQQ
QQQLQEAQAAAAAAAAAVQQQQQQQQQQPPPPQHQLPAHLPTEALAPADSLNDPASESNG
LNELASAVTSTVGLLPPTPTESLAPSNTFVAPQPVVVASPAKLQAAAALTEVANGIEPAP
VKPEPPTQPPKAVVKKENQWFDVGIVKATNMVVTHYFLPPDDAPATDDDSGTTPDYSQFK
KQELQPGTAYKFRVAGINACGRGSFSEISAFKTCLPGFPGAPCAIKISKSLDGAHLTWEP
PSVTSGKITEYSVYLAIQSPQAGEPKSAAPAQLAFMRVYCGPSPSCLVQSASLSNAHIDY
TTKPAIIFRIAARNEKGYGPATQVRWLQESSKDGSMTKPTNKRPLSSSDLKSAPKKPKAD
GQ
NT seq
6669 nt
NT seq
+upstream
nt +downstream
nt
atggcctctcctgttgtccctagtgggggctccccaacaggtgttggggccactgcaggg
ctgctgcagccccgctggaagcgtgtgattgggtggtcaggccctgtgcctcggccccga
catggacacagagctgtggcaatcaaagagctgattgtggtcttcggagggggcaatgag
ggcatcgtggatgagttgcatgtctataacacagctacaaaccagtggttcatcccagct
gtgcgtggagacattccacctggttgtgctgcatatggttttgtttgtgatggaactcgt
ctcctagtatttggtggaatggttgaatatggcaagtacagcaatgatctgtatgaattg
caggccagccgttgggaatggaagagattaaaggccaagatgcccaagaatgggtccaca
ccatgtccccgccttggccatagcttctcgttggtgggcaacaaatgttacctttttggg
ggattggccaatgacagtgaagatcctaagaataacatccccaggtacctaaatgacctc
tatatcttggagctgcggccaggatctggtgtggggtcctgggatattcccatcacctat
ggtgtattgcctccaccacgagaatcccatactgctgtggtctacacagaaaaagacaac
aaaaaatccaaactggtcatatacgggggcatgagtggttgtcgtcttggtgatctctgg
acccttgatatcgattctctgacgtggaacaagcccaatctgagaggggtggctccactc
cctcgtagtctgcattcagccacaaccattgggaacaaaatgtatgtatttggtggctgg
gtgccccttgttatggatgatgtcaaagtggctacacatgaaaaggaatggaaatgcaca
aatactctggcctgtctcaacttagactccatggcttgggagcccattctgatggacaca
ctggaagagaatactccacgggcacgtgcagggcattgtgccgtggccattaatacccgc
ttgtacatctggagtggccgtgatggctaccgtaaagcctggaacaaccaggtttgctgc
aaagatctctggtatcttgagaccgagaaacctccacccccttcacgggttcagctggtt
cgtgccaacaccaactccttggaagtgagctggggttctgtcccaactgcggacacttac
ttactccaactgcagaaatacgacatcccagctgcctcctcgccagctgctaatcctgtg
ccctcagtgcctgtcaatcctcccaagagccctgcccctgctgctgccgcacctgtccct
gccgtgcagcctttggcacaaatgggtataaccctgctgccacagaccacagctgttgct
gcagcccctgccgccgccgccgccgctgctgctcctgccccaccaaccacaacaaccatc
caggtgcttcctactgtgcctacaagcccaatgccagggcctcctccagcagctgccact
gctactcctcgtccacaaactgttccagctgtgctgaaggtcactggtccacaagctacc
acaggagcaccactggtaacagtgcggtcagcaggactagctgggaaaggcccagtgacc
gtgacttctttgccggctggggtacgcatggtggtacccacacagagcactcaagggacg
gtgattggtagcagctctcagatgagtggcatggcagctctggcagctgctgctgcagcc
actcagaaaatcccgccatcctcagcccccactatgttaaccatgcctactgctgctacc
atagttaagactgtcgcaatgtccccaggcactgctacattacccaccacagttaaagtt
gcttcttctccagtcatgaccttgttaaacaaacaggtgagcaatccggccacccgcatg
ctgaagacagcagctgcccaggtgggcacttcagtctcttcatccaccactaacacacct
acccggcccatcatcaccgtgcacaaatcaggcactgtcactgtagcacagcaggcccag
gtgatgacgaccgtagtgggtggggtaacgaagaccatcacattggtgaaaagccctatc
tctgtgcctggaggaagtgcattgatttccaatttgggaaaagtgatgtctgttgtgcag
accaaaccagtccagacatcagctgtaacaggccaagcatcaactggtcctatgactcag
ataatccagaccaaagggcctctacctgctggcactattctaaaactagtgacttcagca
gatggcaagcccaccacaatcatcaccacctctcaggcaggtggcacaggtactaagcct
actatcctgggcatcagcagcgtgtcacccaacacaacaaagcctaataccaccactatt
atcaagaccatccccatgtcagctattattacacaagcaggtggcacaggtgttactagt
agtactgggattaagtctcccatcaccattatcaccacaaaagtgatgaccgcgggcact
ggtacacccgccaagatcattacagcagtacccaaattaaccacaagtcatggacagcaa
ggcgtaacacaggtagtgcttaagggagcaccaggacaacctggcacaatcttgcgaact
gtccctatgggtggagtacgacttgttacccctgtcactgtgtctgcagtcaagcctact
gttaccactttggtcgtgaaaggaacaacaggggttacaaccttaggcactgtaacaggc
acagtctcaacaagcctagctggaactggggcacacaatactaatgcttccttggctaca
cctattaccaccttggggaccattgccacactttccagccaggtcatcaacccagctgcc
atcactgtctcagcagcacagacaaccctgacagcagcagcaggcctcaccactcccacc
atcactatgcagcctgtttctcaacctactcaagtcaccctgattaccacccccagtggt
gtagaggcccagccggtgcatgatttgcctgtttctatcttggcctctcccaccacagag
cagcccacagccacagtcaccatcgctgagccggggcaaggagagtcacagccaaacact
gttacactggtgtgctccaatccaccctgtgaaacacatgatactggcacaaccaacaca
gctacgaccacagttgtgggcactttgggtgggccagctcagttacagtttgtgtgtgat
gggcaggaaggtggtggccttcagcccaatggtcgactggtgcggatatgctccaatcct
ccttgtgagatgcatgagactggtaccaccaacacagcaaccactgttctgagtgctggg
cagaagatatgttccaatccaccttgtgaaactcatgagactggcacaaccaatacagcc
accacctccaaaacagagagggcgccctcagatccaccatgccatactttccagaccagc
gccactggcaccactatgacagtaaagcccattgtaggtacaggccagctagtgtgttcc
aatcctccccgcgaaacccacgagactggcactacaaacactgctaccaccaccacctca
aacatggaccaagggcaacctgatgacggacagaaggaattgactaacacttcatgccaa
acaaagcagacaggtagcaccagcactaccatgacaacaaaaagagatattccctcagaa
catccatgtgcagttcaaattgtaagtttcgtgccagctgctggctcgcctagtgctgcc
tctggcactaccgtagagaaaagcaatgaaagaccacaagccctgaaaaaagtccagtgt
gaatcccatcatactcataccaccaatactgccaccacagctcggtccctcatgggccag
gggcagccagatggcgaatggatgggatctgccaaccctccatgccaaacacagcaaacc
aactctaccagcaccaccatgtctgtcaaaattgatgtgccagttcagtcaagtgcatct
tgcaagacccatagcacggataccaaggatacaaatcttcaagtgtgctctaatccacct
tgtgaaactcatgaaacaggtaccacaaatgcagctaccgtaacgacatcaaacctgggt
gctacccagcaggtgtgctccaatccaccttgtgaaactcatgaaacgggtaccacaaat
gcagctaccgtaacgacatcaaacctgggtactacccagcaggtgtgctccaatccacct
tgtgaaattcatgaaacgggtaccaccaacacagctaccacagcgacttccaagatagcc
gtgggacagcaagtgtgctcgaatccaccttgtgagactcatgagactggtactacgaac
acagccaccactaccacatcaaacctgggagctgaacaaaatgaaggtgcccagcaccag
cacccccctgttactccaccctgtgaaacacagcaaaccaactccaccagcaccacaatg
acacccagcataggaggtgatggcgctcagtcttccagctcagcaccagcacaatgtggc
aactcagaactgagaaaatctcctgagagagaaccaccagggattgctggatctttgcct
cagagctcaacacccagagtatgctcaaaccctccttgtgagacccatgaaacgggaacc
acccatactgccaccacagttacttcttccatgggtgctaaccaagatcagccacctgct
accaatgggcaacaaggggaacctgagataccggtgacggagagtccagctgctagcagc
cccaatactgctgtggtgaccacagttccctccactcaaatcagagctgtcactactgtc
acccagtccacgccagcaccagggccttctgtaccgaacatctcctcgctcactgatgtc
cctgcaggcgaggcagttccccctgttgagacttctgatgccaccagcacagattccctt
ccggcaccctccgaaccactgcagccctccatagagatgcagaccgcagttgcaacccct
gagcctcaggggcaagcacaggtcgcctcagctggcacgccgccaaccgaaggccctctg
ggtgaacctgcttcccatccagaacttgcccctcctactgaagaggcaccacccacacca
gcagcccccacccaagagtctgtggctatggtggtgctgccccaggccactcctgcagct
ccgccgtcctcagaggtggagcagttagcattgcctcaggaactgatggcggagagccag
gcgggcaccaccactctgatggtgacaggattgactcctgaggaactagccgtaacagct
gctgcagaggctgctgcccaagctgctgccactgaagaggcacaagccctggccatccag
gcggtcttgcaagcagcccagcaggctgtaatgggtcctggagaagccatggatacctca
gaggcagcagccacacaggctgaactaggccacctgagttcagagggccctgaaggacag
cccactgccatccccatcgtgcttactcagcaagacttggcagccctggtgcagcagcag
caacagcagcttcaggaggctcaggcagcagcagcggcagcggcagctgccgttcagcaa
cagcagcaacagcagcagcagcagccgccacctcctcagcatcagttgcctgcccacttg
cctacagaagctctggctcctgctgatagccttaatgatcctgccagtgagagcaatggc
ctcaatgagttggctagtgcagtgaccagcacggttgggctgttacctcccactcccaca
gagagccttgctccttcaaatactttcgtggccccacagcctgtggtagtagccagcccg
gcaaaattgcaggcagcagctgccctgacagaagttgctaatgggattgaaccagctcca
gtgaaaccagagcctcccacacagcctccaaaagcggttgtgaagaaggaaaatcagtgg
tttgatgtgggtattgtcaaggcaactaacatggtggtgacacactacttcctgccgcct
gatgatgcacctgctacagatgatgattcaggaactactcctgattattctcagttcaag
aagcaggagctacagcctggtactgcttataagttcagagtagcaggaattaatgcctgt
ggacgaggctctttcagtgaaatctcagcattcaagacctgtttgcctggttttcctgga
gcaccttgtgccattaaaatcagtaaaagtctggatggggcccacttgacttgggaacca
ccttcagtcacctctggaaaaatcacagaatactcagtgtatctggccatccagagtccc
caggcgggtgaacctaagagtgcagcacctgcccagctggccttcatgcgggtttactgt
gggcccagtccttcgtgcctggtccagtcagctagtctctccaatgcccatatagactac
accacaaagcctgccattattttccggattgctgcccgcaacgagaagggctatggtcct
gccacacaagttcggtggcttcaagaatccagtaaagatggatctatgacaaaaccaacc
aacaagcggccgctttcatcttctgatttgaaaagtgctccaaagaagcccaaagcagat
gggcagtga
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integrated database retrieval system
