Notechis scutatus (mainland tiger snake): 113418131
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Entry
113418131 CDS
T09026
Symbol
SOX13
Name
(RefSeq) transcription factor SOX-13 isoform X1
KO
K09269
transcription factor SOX5/6/13 (SOX group D)
Organism
nss
Notechis scutatus (mainland tiger snake)
Brite
KEGG Orthology (KO) [BR:
nss00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
nss03000
]
113418131 (SOX13)
Transcription factors [BR:
nss03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
113418131 (SOX13)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HMG_box
HMG_box_2
Motif
Other DBs
NCBI-GeneID:
113418131
NCBI-ProteinID:
XP_026532637
Ensembl:
ENSNSUG00000016538
UniProt:
A0A6J1UVT3
LinkDB
All DBs
Position
Unknown
AA seq
611 aa
AA seq
DB search
MSMRSLVSPQLELNGAGNMVNCTVKTEEKNESHYKLTQGEAPCTSPGSNSPSKSPLPLGD
FVDPPILPQESVSPVDKALDSRNPVLEPALSHQEKLDFNKNLREVMPTIEKLLSSEWKER
LLGKNPMDSKEVKGTQESLAEKELQLLVMINQLSILRDQLLTAHSEQKNMAAMLFEKQQQ
QMELARQQQEQIAKQQQQLIQQQHKINLLQQQIQQVNMPYVMIPAFSPNHHPLPVPPDSQ
MALPIQPIPCKPVEYPMQLLHSPPSALKRPASSGHLQIQESSQPLNLTAKSKGSEPPNAC
STPNLKISSNQSLGGVSRELQTSPPSLPLGFLGEGDAITKAIQDAQQLLHNQSRAIDGSP
NHPYIKDHSNLDSSPGKEQMDESSLQRLDESLLTCEGDGSRHFPESRNNNHIKRPMNAFM
VWAKDERRKILQAFPDMHNSSISKILGSRWKSMSNQEKQPYYEEQARLSRQHLEKYPNYK
YKPRPKRTCIVEGKRLRVGEYKALMRNRRQDARQGYLIAPQSSQMLPSSSDLVYQRSVGI
HLAPPLMDHYLSHNMEPNMPVIVNTCSLKPEEGDGAEDSHSMPDGEMYHYSEDEDSEGEE
KSDGELVVLTD
NT seq
1836 nt
NT seq
+upstream
nt +downstream
nt
atgtccatgaggagccttgtctctcctcagctggagcttaatggagctgggaatatggtg
aactgcaccgttaaaacagaagaaaagaacgagagccactacaagttgactcagggggag
gctccttgcacatcacctggctccaacagccccagtaaatcacccttgccactgggtgac
tttgttgatcccccaattctcccacaggaatctgtatctccagtggacaaggcgttagat
tccaggaaccctgtgctcgagcctgcacttagccaccaggaaaaattggatttcaataaa
aatctaagagaagtgatgccgaccattgagaagttactgtccagtgaatggaaagagaga
cttctggggaaaaatcctatggattccaaagaggtaaaaggaacccaagaaagcttggca
gagaaagaattacagctgctggtcatgattaaccaactgtccatcctgagggaccagctg
ctgacagcccattcagagcagaagaacatggctgctatgttgtttgagaagcagcaacaa
cagatggagctggccaggcaacagcaagaacagattgccaagcaacagcaacaacttatc
cagcaacaacacaagatcaacttgctgcaacagcagatccagcaggtcaacatgccctac
gttatgattccagcgttttctcccaaccaccaccctcttcctgtccctccagattctcag
atggcacttcctatccagccaattccatgtaagccagtggaatatcctatgcagctgctt
catagtcctccttcagcactaaagagacctgcaagctcaggccacctacagatccaggaa
tcttcacagccactgaacttaacagcaaagtctaaaggctctgaaccccccaatgcctgc
agcacacctaatttaaagattagtagcaaccagtccctcggtggtgtttctcgagagttg
cagaccagccctcccagccttccgttggggttccttggagagggagatgctataactaaa
gcaatacaagatgctcaacaacttctgcacaaccaaagcagagctatagatggttctcca
aatcatccatatattaaggatcatagcaatttggattcttcacctggaaaagaacagatg
gacgagtcgtctcttcagagattggatgagtctctactaacatgtgaaggagatggctca
cgacatttccctgaatccaggaacaacaaccacataaagcgccccatgaatgcttttatg
gtgtgggccaaggatgaaagacgtaaaattttgcaagctttcccagacatgcacaattca
agcatcagtaagattctaggatcccgatggaaatccatgtccaatcaggagaagcagcct
tattatgaagagcaagcacggctgagtcgccagcatttagagaagtatcccaattacaag
tacaagccccgccccaaacgcacctgcattgtggaagggaagcggcttcgtgttggcgag
tacaaggcactgatgaggaatcggcgccaggacgccaggcagggctacctgattgcgccc
caaagcagccagatgctaccttcctcttcggatctcgtgtaccagcgatcagttgggatt
catctagctccaccactgatggatcactacttgtcccataacatggaaccaaacatgcca
gtcatagtaaacacatgtagtctgaagccagaagaaggggatggggcagaggacagtcat
tcaatgcctgatggggagatgtaccactacagtgaagatgaggattctgagggcgaagag
aagagtgatggcgagctagtggttctcacggactaa
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integrated database retrieval system
