Notechis scutatus (mainland tiger snake): 113418199
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Entry
113418199 CDS
T09026
Symbol
XAB2
Name
(RefSeq) pre-mRNA-splicing factor SYF1
KO
K12867
pre-mRNA-splicing factor SYF1
Organism
nss
Notechis scutatus (mainland tiger snake)
Pathway
nss03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
nss00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
113418199 (XAB2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
nss03019
]
113418199 (XAB2)
03041 Spliceosome [BR:
nss03041
]
113418199 (XAB2)
Messenger RNA biogenesis [BR:
nss03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
113418199 (XAB2)
Spliceosome [BR:
nss03041
]
Complex B
Other components
Prp19-related factors
113418199 (XAB2)
Complex C
113418199 (XAB2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HAT_Syf1_CNRKL1_C
HAT_Syf1_M
HAT_Syf1_CNRKL1_N
HAT_PRP39_N
HAT_PRP39_C
TPR_14
TPR_2
Suf
TPR_12
TPR_8
TPR_15
ARM_TT21_C
ARM_TT21
TPR_1
RPN7
TPR_16
NRDE-2
LTN1_E3_ligase_6th
ATG1-like_MIT2
Motif
Other DBs
NCBI-GeneID:
113418199
NCBI-ProteinID:
XP_026532734
Ensembl:
ENSNSUG00000018046
UniProt:
A0A6J1UYL8
LinkDB
All DBs
Position
Unknown
AA seq
895 aa
AA seq
DB search
MGGQPNARRRRGTDSMLNFERNEEGRKDVIFARRIWPRQAKAAMPESETVSGKRELFFEE
EDLQYEEEILRNPFSVKCWIRYIDFKQNAPKHILNLIYERALKELPGSYKLWYNYLKQRR
KQVKSKCVTDPCYEEVNNCHERALVFMHKMPRIWLDYCQFLMDQCRITRTRRTFDRALRA
LPITQHHRIWPLYLKFVRLYPLPETAVRVYRRYLKLSPENAEEYIEYLRSIDRLDEAAVR
LGAVVNDERFVSKEGKSNYQLWHELCDLISQNPDKVKSLNVGAIIRGGLTRFTDQLGKLW
CSLADYYIRSGHFEKARDVYEEAIQTVMTVRDFTQVFDSYAQFEESMIAAKMETTSEMGR
EEDDDVDLELRLARFEQLITRRPLLLNSVLLRQNPHNVHEWHKRVKLYEGKPWEIINTYT
EAVQTVDPFKATGKSHTLWVSFAKFYETNGQIEDARTIFEKATKVNFKQVDELASVWCEY
GEMELRHENYDQALRILRKATAIPAKKAEYFDSTEPVQNRVYKSLKVWSMLADLEESLGT
FKSTKAVYDRILDLRIATPQIIINYGLFLEEHKYFEESFKAYERGISLFKWPNVYDIWNT
YLTKFIDRYGGKKLERARDLFEQALDSCPQKYAKTIYLLYAKLEEEYGLARHAMAVYERA
TQAVLPSEKHDMYNIYIKRAAEIYGVTHTRSIYEKAIEVLSDEHAREMCLRFADMECKLG
EIDRARAIYSYCSQMCDPRTTANFWQTWKEFEIRHGNEDTIREMLRIKRSVQATYNTQVN
FMASQMLKVYSNATGTVSDLAPGQSGMDDMKLLEQRAEHLAAEAERDQPRAKEKILFVRS
DASRSELAELSKQANPDEIDINLDDSDESEDNEPDEVQLEQKTVPSAVFGGLKED
NT seq
2688 nt
NT seq
+upstream
nt +downstream
nt
atgggaggccagcccaatgcaagacggagacgagggactgattcaatgttaaatttcgaa
cgcaacgaagaagggaggaaagacgtcatctttgcgcgccgtatttggcctcgacaggca
aaggccgcgatgccggagtcggagactgtctcaggaaagcgggagcttttcttcgaggaa
gaagacctacaatatgaagaagagatcttgcgcaacccattttctgtcaagtgctggatc
cgctatattgacttcaagcagaatgctcccaaacatatcctgaacctgatctatgagaga
gctcttaaggaattgccaggaagctacaagctctggtacaactatcttaagcagcggcgg
aaacaagttaagagcaaatgtgtaacagatccctgctatgaagaagttaacaactgccat
gagcgtgccctggtcttcatgcataagatgcctcggatatggctagattactgccagttt
ctcatggatcaatgtcggatcacccgtacccgcaggacatttgaccgggcgctcagagct
ctgcccatcacacagcaccatcgtatctggccactttacctgaagtttgtgcgactgtat
ccattacctgagacagctgtacgggtctaccgtaggtacctaaagctgagccctgagaat
gcagaggaatatattgagtatctgcgctccattgaccgtctggatgaagccgctgtccgt
cttggagctgtggtgaatgatgaacgttttgtttccaaggagggaaaatctaattatcag
ttatggcacgagctctgtgatctcatctctcaaaatccagacaaggtgaagtcactcaat
gtaggggccatcatccgaggtggcctgactcgtttcactgaccagttgggcaagctgtgg
tgttctttggcagattactacatccgcagtggccattttgagaaggctcgtgatgtgtat
gaagaagctattcagacagtgatgacagtacgggatttcactcaagtgtttgacagctac
gcccagtttgaggagagcatgattgctgctaagatggagaccacctctgaaatgggacgt
gaggaggatgatgatgtagatctggaactgcgcctggcacgctttgagcagctgatcaca
cgtcggcctctgcttctcaacagtgtcctcctgcgccagaatcctcacaacgtccatgag
tggcacaagcgggtgaagctgtacgaaggcaaaccttgggagatcatcaacacgtacacg
gaagcagtgcagactgtcgacccgtttaaagccactggaaagtcacatacgttgtgggtt
tctttcgccaagttctacgagaccaatggacagatagaagatgccagaacaatttttgaa
aaggccaccaaggtgaacttcaagcaggtggatgaactggccagcgtctggtgcgagtat
ggtgagatggagctgcggcatgagaactacgatcaagccctgcgtatcctgaggaaagct
acagcgatcccagctaagaaagctgaatattttgattccacagagcctgtgcagaatcgt
gtatataagtccctcaaggtttggtccatgctggctgacttggaagaaagtctcggcact
ttcaaatctactaaggctgtatacgatcgtattttggatctacgcattgccaccccacaa
atcatcattaactatggtctgttcctggaggagcacaaatattttgaagagagcttcaag
gcatatgagagaggcatctccttgtttaagtggccaaatgtttatgatatctggaacacc
tatctaaccaaattcattgaccgctatggtgggaagaagttggagcgtgctcgggatctt
tttgagcaggccttggatagctgtccccagaaatacgcaaaaactatctatctcttatat
gccaagctggaggaggaatatgggctggcccgccatgccatggcagtatatgagcgggct
actcaggctgtgctgccttcagagaagcatgatatgtacaacatctacatcaagagagca
gctgaaatttatggcgtcacccacacacgtagcatctatgagaaagcgattgaggtgcta
tcagatgaacacgctcgggagatgtgtctgcgctttgctgatatggaatgcaaattgggt
gaaatagacagagctcgggcaatctattcctattgctcacagatgtgtgacccccgaact
acggccaacttctggcagacatggaaagaatttgagattcggcatgggaacgaagacact
atccgagaaatgctgcgcattaagcgaagtgtgcaggctacttacaatactcaggttaac
ttcatggcttctcagatgctaaaggtttacagcaatgccacaggcacagtgtccgactta
gcaccaggacagagcggcatggatgacatgaagctcttagagcagcgagcagaacacctg
gcagccgaagcagaaagagatcagcctcgagctaaggagaagatcttgtttgtcaggagt
gatgcttcccgcagtgaattggctgaactttccaagcaggccaatcctgatgagatagac
atcaatttggatgacagcgatgagagtgaagacaatgagcctgatgaggtgcagctggaa
caaaagactgtcccctctgctgtgtttggtggacttaaagaagactga
DBGET
integrated database retrieval system
