Notechis scutatus (mainland tiger snake): 113419407
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Entry
113419407 CDS
T09026
Symbol
DDX5
Name
(RefSeq) probable ATP-dependent RNA helicase DDX5 isoform X1
KO
K12823
ATP-dependent RNA helicase DDX5/DBP2 [EC:
5.6.2.7
]
Organism
nss
Notechis scutatus (mainland tiger snake)
Pathway
nss03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
nss00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
113419407 (DDX5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
nss03041
]
113419407 (DDX5)
03009 Ribosome biogenesis [BR:
nss03009
]
113419407 (DDX5)
Enzymes [BR:
nss01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
113419407 (DDX5)
Spliceosome [BR:
nss03041
]
Complex A
U1 snRNP components
U1 related factors
113419407 (DDX5)
Complex B
113419407 (DDX5)
Ribosome biogenesis [BR:
nss03009
]
Eukaryotic type
Pre-60S particles
Helicases
113419407 (DDX5)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
P68HR
ResIII
Helicase_C_2
Cas3-like_C_2
ERCC3_RAD25_C
BNIP2
Motif
Other DBs
NCBI-GeneID:
113419407
NCBI-ProteinID:
XP_026534539
Ensembl:
ENSNSUG00000008998
UniProt:
A0A6J1V3Y6
LinkDB
All DBs
Position
Unknown
AA seq
600 aa
AA seq
DB search
MPGYSSERDRGFGGPRFGGSRGGSLGGKKFGNPGEKLTKKKWNLDELPKFEKNFYQEHPD
VARRAMQEIEQYRASKEITVKGHNCPKPVMNFYEANFPANVMEVIQRQNFTEPTAIQAQG
WPVALSGLDMVGVAQTGSGKTLSYLLPAIVHINHQPFLERGDGPICLVLAPTRELAQQVQ
QVAAEYGRACRLKSTCIYGGAPKGPQIRDLERGVEICIATPGRLIDFLEAGKTNLRRCTY
LVLDEADRMLDMGFEPQIRKIVEQIRPDRQTLMWSATWPKEVRQLAEDFLKEYVHINIGA
LELSANHNILQIVDVCHDVEKDDKLIRLMEEIMSEKENKTIVFVETKRRCDDLTRKMRRD
GWPAMGIHGDKSQQERDWVLNEFKHGKAPILIATDVASRGLDVEDVKFVINYDYPNSSED
YIHRIGRTARSTKTGTAYTFFTPNNIKQVSDLISVLREANQAINPKLLQLIEDRGSGRSR
GDRRDRYSAGKRGGFGFRERENFERTYGAVGKRDFGAKAQNGGFGAQSFGNGTTFGNSFG
AAGMQGGFRAGTPAYQNGYDQQYGNNMANMHSAMNQQQYAYPATGGTPMIGYPMPASYTQ
NT seq
1803 nt
NT seq
+upstream
nt +downstream
nt
atgcctgggtattccagtgagagggaccgcggatttggtggccctcgttttggaggaagt
agagggggatctttaggggggaagaaattcggaaatcctggagaaaagcttaccaagaag
aaatggaatctagatgagcttcccaaatttgaaaaaaatttctatcaggaacatcccgat
gttgcccggcgtgctatgcaagagattgaacaatatagagcaagcaaagaaatcactgtt
aaaggccataactgtcccaaaccagttatgaatttttatgaagctaattttcctgcaaat
gttatggaagtaatccagaggcagaacttcacagagccaactgctattcaggcacaaggc
tggcctgttgctttgagtggactagatatggttggtgtagcacaaactggatcagggaag
acattgtcttatttgttgccagccatagtacatataaatcatcaaccattcctagagaga
ggagatgggcccatttgtctggtgctggcaccaactcgagaattggctcagcaagtgcag
caggtggctgcagaatatggtagagcttgccgtttaaagtctacttgtatttatggaggt
gctccaaagggaccacaaatacgtgatctggagagaggtgtggaaatctgcattgcaaca
cctggtagactcatagattttttagaagctggcaaaaccaacttacgaagatgcacttac
cttgttcttgatgaagctgatagaatgcttgacatgggatttgaacctcagatccgaaaa
attgttgaacagattagacctgataggcagacactgatgtggagtgcaacatggcctaaa
gaagttagacagcttgcagaagacttcttaaaagaatatgtacacatcaacattggggca
ttggaactaagtgcaaaccacaatattctgcagatagtggatgtatgtcatgatgtagag
aaggatgacaagcttattcgattgatggaagaaattatgagtgaaaaagaaaataagaca
attgtgtttgtggagaccaaaagaagatgtgatgatctaacaagaaaaatgaggagagat
gggtggccagcaatgggtatccatggtgacaaaagtcaacaggagagagactgggtttta
aatgaattcaaacatgggaaggctcctattctgattgccacagatgttgcctccagaggt
ctagatgtggaagatgtgaaatttgtcatcaattatgactacccaaactcctctgaggac
tatatccaccgaattggacgaactgcccgcagcaccaaaacaggcacagcatacacattt
ttcacacctaataatataaaacaagtaagcgacctcatctctgtacttcgtgaagctaat
caagcaatcaatcccaaattgctccagttgattgaagacagaggctcaggtcgttccaga
ggggaccgacgtgacagatattctgcgggtaaaagaggtggatttggttttagagaaagg
gaaaactttgaaagaacctatggtgcagtgggcaagagagactttggagcaaaagcacag
aatggtggctttggtgctcaaagttttggtaacggaactacctttggtaacagctttgga
gcagctggcatgcaaggtggatttagggctggcactccagcctatcaaaatggctacgac
cagcagtatggaaataacatggcaaacatgcacagtgcaatgaaccaacaacagtatgca
taccctgcaactggtggtactccaatgataggttatccaatgccagcaagttatacccaa
taa
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integrated database retrieval system
