Notechis scutatus (mainland tiger snake): 113419532
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Entry
113419532 CDS
T09026
Symbol
PDZRN3
Name
(RefSeq) E3 ubiquitin-protein ligase PDZRN3
KO
K15682
ligand of Numb protein X 3/4 [EC:
2.3.2.27
]
Organism
nss
Notechis scutatus (mainland tiger snake)
Brite
KEGG Orthology (KO) [BR:
nss00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
nss04121
]
113419532 (PDZRN3)
Enzymes [BR:
nss01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
113419532 (PDZRN3)
Ubiquitin system [BR:
nss04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Ligand of Numb proteins
113419532 (PDZRN3)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PDZ
PDZ_6
PDZ_2
zf-C3HC4_2
zf-C3HC4
zf-RING_UBOX
zf-RING_2
zf-C3HC4_3
Sina_ZnF
zf-RING_5
zf-C3HC4_4
Prok-RING_4
PDZ_Tricorn
zf-TRAF
TRAF3_RING
zf-rbx1
Motif
Other DBs
NCBI-GeneID:
113419532
NCBI-ProteinID:
XP_026534759
Ensembl:
ENSNSUG00000006989
UniProt:
A0A6J1V4M8
LinkDB
All DBs
Position
Unknown
AA seq
1059 aa
AA seq
DB search
MGFELDRFNGEVDPDFKCNLCNKVLEDPLTTPCGHVFCAGCVLPWVVQQGSCPVKCQRMS
TKELNHVLPLKSLILKLDIKCANRERGCEKVVKLQHLAEHAEMCDYSPAKCRHKGCAEVL
NLRDVDAHMRESCEARPVGICEQGCGLVLTHRERKTGSHCCLQALKAHNGALQAKLAGLE
KELKKEALRAGKREKSLLSQLSAVQLELQMTALRYQKKFTEYSTRLDSLGRSLAAFSPSK
GEETKTLNLILHRDSGSLGFNIIGGRPCMDNQDGPTSEGIFVSKIADSGPAAKEGGLQIH
DQIIEVNGKDLSKATHDQAVEAFKTAKDPIVVQVLRRTPRTKIFSPSHECLLVDIGTQTE
ITFEHIMALTKMGSPTPPVLDPYLLPEEHSSGHEYYDPNVYMGGIHQDMDREDLELEEVD
LHRVNSQDKFGLTVCYRTDDEDDIGIYISEIDPNSIAAKDGRIREGDRIIQINGIEIQNR
EEAVALLTSEESKNVSLLIARPEILQLDEGWMDDDRNDFLDDLHMDMLEEQHHQAMQFTA
NMLQQKKKNEEDGGTTDTATILSNQHEKDSGVGRTDDSTRNDESSEQENNADDHVTSSNT
LGSQKKLAYSQDTLGSGDMQFSNESFISADCTDADFLGISVDECERFRELLELKCQVKST
NPYSLYCHNSTLDMSKSDHESVDRELEMLNEELRNIELECLNIVRAHKMQQLKEQFREPW
MLHNSGFRNYNTSIDVRRHELSDITELPEKSDKDSSSAYNTGESCRSTPLTLDISPNNSL
CRTADALALQDREGAEGTLKLLLPSSEDQESSLAKPPPPKDADLSQPLEIKERKINEESK
SSIPAPKAGGSSLTSYQHSPYKHAHIPAHAQHYQSYMQLIQQKSAVEYAQSQMSLVSMYK
DWNSSNQSEPRMEWKVKVRSDGTRYITKRPVRDRLLRERAIKIREERSGMTTDDDAISEM
KMGRYWSKEERKQHIVKAKEQRKRREFMMQSRLECLKEQQGTEDKKEMNIIELSHKKMMK
KRNKKIFDNWMTIQELLTHGTKSPDGTKVYNSFLSVTTV
NT seq
3180 nt
NT seq
+upstream
nt +downstream
nt
atggggtttgagttggatcgcttcaacggggaggtggatcccgacttcaaatgcaatctg
tgcaacaaagttttagaggaccctctcaccaccccttgcggtcatgtgttctgcgccggc
tgcgtcctgccgtgggtcgtgcaacaaggcagttgcccggtgaagtgccagcggatgtcc
accaaggagctgaaccacgtcctgcccttgaagagcctcatcctcaagctggacatcaag
tgcgccaaccgcgagcggggttgcgagaaggtggtcaagctgcagcatttggccgagcac
gccgagatgtgcgactactcgccggcgaagtgccgccataagggctgcgccgaagtgctc
aacttgcgcgacgtggacgcgcatatgcgcgagagctgcgaggcccggccggtgggcatc
tgcgagcaaggctgcggcttggtgctcacccatcgcgagcgcaagaccggctcccactgt
tgcctgcaggcgcttaaggcgcacaacggcgccctccaagccaaactggccggcctggag
aaggagctgaagaaagaggcgctgcgggcgggcaagagggagaagtcgctcctctcgcag
ctatcggccgtgcagctagagctccagatgacagcgctgcgttaccagaagaagttcact
gaatacagcacccgcctcgactcgctcggacgtagcctggctgccttttcacccagcaag
ggtgaagagacaaaaacattgaatcttattcttcatcgtgattcaggatctcttggattt
aatataataggaggtcgtccatgtatggacaatcaagatggtccaaccagcgaagggatc
tttgtctctaaaatagctgacagtgggcctgctgccaaggaaggaggactccagattcat
gaccagattattgaagtaaatggaaaagatttgtccaaggcaactcacgatcaagctgta
gaagcctttaaaacagctaaagatcccattgtagtgcaagtcctgagaagaactccacgc
accaagatcttcagtccttctcatgagtgtctcttggtagacataggcactcaaactgag
attacctttgaacatatcatggctctaaccaaaatgggctcacctaccccaccagtcctg
gatccatatctcttacctgaggagcattcatcagggcatgaatactatgaccccaatgtt
tacatgggaggcattcatcaagacatggacagagaggacctagaattagaggaagtggac
ctacatcgagtgaacagccaggacaaatttggtcttactgtctgctacagaactgatgat
gaagatgatattggtatttatatcagtgagattgatcccaacagcattgctgcaaaggac
ggccgtatcagagagggtgatcgcataattcaaattaatggaattgagatacaaaatcga
gaagaagctgtagctctcttgactagtgaagaaagcaagaatgtctccttactcatagca
agaccagaaattctccagctagatgagggatggatggatgatgacagaaatgattttctg
gatgacttacatatggacatgctggaggaacagcaccaccaagcaatgcagtttactgcc
aatatgctgcagcagaaaaagaaaaatgaagaggatgggggtaccacagatacggcaacc
attttatccaaccaacatgaaaaagacagtggtgtagggcgtacagatgacagcactcgg
aacgatgagagctccgagcaagagaacaatgccgatgatcacgttacttcctcaaacact
ttgggaagccagaagaaactcgcctatagccaggacacactgggcagtggtgacatgcag
tttagcaacgagtcatttatttcagctgattgcacagatgcagacttccttggcatctca
gtggatgagtgcgagaggtttcgtgaactgctggaactgaaatgccaggtcaaatccacc
aacccgtacagcctgtactgccacaacagtactctggatatgagtaaaagtgaccacgag
agtgtggacagggagctggagatgctgaatgaagagctgcgtaatattgagctggagtgt
cttaatattgtccgagcccataagatgcagcaattgaaggaacagtttcgagagccatgg
atgctgcataacagtggcttccgcaactacaataccagcattgatgtccgccgacatgag
ctctcggatattactgagctcccagaaaaatcagataaggacagctccagtgcatacaac
actggtgagagttgccgaagcacaccactcactttggacatctccccaaacaactcttta
tgtaggacagcagacgctctcgctttacaagacagggagggggcagaaggcactctgaaa
ttgttgttgcctagttcagaagatcaggaatccagcctggctaaaccgcctcctcccaaa
gatgctgaccttagccagccattggaaatcaaggaaaggaaaattaacgaagaaagcaaa
agctcaattccagctcccaaagctggtgggtcctctttgacttcctatcagcattctcca
tacaagcatgcccatattccagcccacgcccagcactaccagagctacatgcagctgatc
caacagaaatccgcagtggaatatgcacagagccaaatgagtttggtgagcatgtataaa
gattggaactcttcaaaccaaagtgaacccaggatggaatggaaagtcaaggtgagaagc
gatggtactcgctacatcaccaagaggccggtcagggaccggctgctacgagagcgtgct
ataaagatcagagaggagcgcagtggcatgacaacagatgacgatgccatcagtgaaatg
aagatgggacgttactggagcaaggaggaacggaagcagcatattgtgaaggccaaggag
cagagaaagcggcgtgagtttatgatgcaaagtcggttggaatgcttaaaggaacaacaa
gggactgaggacaagaaggaaatgaatatcatagaactgagccacaaaaaaatgatgaag
aaaagaaacaaaaagatatttgacaattggatgacaattcaggaactcctaacccatggc
acaaaatcaccagatgggacaaaagtttacaactctttcctctcagtgactaccgtataa
DBGET
integrated database retrieval system
