Notechis scutatus (mainland tiger snake): 113419535
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Entry
113419535 CDS
T09026
Symbol
COL4A2
Name
(RefSeq) collagen alpha-2(IV) chain
KO
K06237
collagen type IV alpha
Organism
nss
Notechis scutatus (mainland tiger snake)
Pathway
nss04382
Cornified envelope formation
nss04510
Focal adhesion
nss04512
ECM-receptor interaction
nss04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
nss00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
113419535 (COL4A2)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
113419535 (COL4A2)
09142 Cell motility
04820 Cytoskeleton in muscle cells
113419535 (COL4A2)
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
113419535 (COL4A2)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
nss04147
]
113419535 (COL4A2)
00536 Glycosaminoglycan binding proteins [BR:
nss00536
]
113419535 (COL4A2)
Exosome [BR:
nss04147
]
Exosomal proteins
Exosomal proteins of other cancer cells
113419535 (COL4A2)
Glycosaminoglycan binding proteins [BR:
nss00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
113419535 (COL4A2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Collagen
C4
Motif
Other DBs
NCBI-GeneID:
113419535
NCBI-ProteinID:
XP_026534758
UniProt:
A0A6J1V295
LinkDB
All DBs
Position
Unknown
AA seq
1532 aa
AA seq
DB search
MKSTPRFSLGCWTRQDMQIILLVGLTVLLPACVQAGGKSYTGPCAGRDCSGGCECFPEKG
ARGQPGLLGQQGPPGPSGVMGIPGLSGHKGDKGERGRPGITGPKGEAGQRGVTGFPGADG
IPGHPGQGGSRGKPGHDGCNGTKGDPGPQGIQGPAGTPGFFGIQGPKGQKGEPFALPEEL
AIQFRGDPGDSGVVGFMGPQGAPGLLGEPGLEGDSGLPGLPGPPGPPGPIGNRGLGFYGK
KGEKGEIGPPGPPGCTSTGEFVGSIDEILNEHKGMKGNKGMIGEPGFPGFPTQEAEKGEE
GITGFPGQRGLPGINGLKGAEGDVGTPGNYGFQGNPGQKGMKGDPGDKGIRGPPGHAQHP
TLIKGVPGDRGLDGIPGPEGERGTKGSPGPPGAEGSFDGVSERRGFPGEMGPKGFIGDPG
FPANRPGPPGLDGEPGTPGFPGPPGPPGSPGYSVGLKGYPGVPGPAGQQGYPGPQGQKGL
KGDTGDCKCVEQIEGRRGPAGQPGPPGFQGPIGYVGRKGELGDQGYHGLPGFTGGKGLPG
EPGPSGPKGIKGDSQYVTIKGAKGEPGTPGIPGSQGEDGSPGRNGIDGLPGFPGLRGDGI
RGGQGDPGSAGQPGPKGFPGETGLPGVSLPGPKGYRGPTGDLGTYGNPGFQGPPGPPGTP
ARTECGQTQDHFLRDNRTESIHSGTSCVMAPKGAPGYPGPPGLPGAKGTKGIPGEFGLHG
PQGPQGLQGDQGRGGAGSPGFTGPRGSRGAPGIPGERGLQGNPGLPGLLGRLGEKGLTGD
VLGAPPGFPGDNGPPGFPGTKGLQGDQGLPGIKGRDGFPGLSGSKGNPGFRGPTGLTGIR
GPPATFGFPGLPGQQGSLGRKGSQGFVGSPGVRGEPGEPGKVGPVGMKGLPGDKGGQGFI
GTKGKAGETGLPGTAGMPGFPGLKGSKGSRGIGGFSGAMGFKGWPGQKGIYGEKGLPGKQ
GAKGPSGEFGLKGFPGQFGEQGTPGDPGIPGASGDRGNVGNIGLPGRKGVHGSKGLPGLD
GLPGSKGLPGSPGPDGYGTSGFIGALGEKGPAGDPSPIEGSRGPPGQKGQRGDPGWRGLA
GAPGPDGRPGFPGVSNISGIPGDVGSPGFDGVPGYPGVPGIPGTPGSFAIKGEEGSIGAA
GEDGLKGIKGAQGPDGRPGISGLPGAKGYKGEQGVMGFIGQTGISGDFGPIGPKGDRGPT
GFQGPPGSPGLPPLLPKLVAERGASGAPGKIGPHGPAGEMGPHGPPGDPGFRGPIGKPGA
PGRGGIAATPGFRGDQGGQGLHGLAGFEGAAGAPGTPGIPGMPGRSVNIGYLLVKHSQST
QEPMCPEGMRQLWSGYSLLYFEGQDKAHNQDLGLAGSCLARFSTMPFLYCNPGDVCYYAS
RNDKSYWLSTTASLPMMPVVEEEIRPYISRCSVCEAPALAIAIHSQDVTIPHCPEGWRSL
WIGYSFLMHTAAGAEGGGQSLVSPGSCLEDFRATPFIECNGARGTCHYFANKYSFWLTTI
DHHFQHSPSSDTLKAGLIRTHISRCQVCMKNL
NT seq
4599 nt
NT seq
+upstream
nt +downstream
nt
atgaaaagtactccacgcttcagtttaggatgctggactaggcaggatatgcaaattatc
ctcctggtgggattgactgtgcttcttcctgcctgtgtacaagctggaggaaagtcctac
actggaccatgtgcagggagagactgcagtgggggctgtgaatgttttccagaaaaagga
gctcgtggccagccaggattgcttgggcaacaaggaccccctggaccatcgggagtgatg
ggcataccgggactttcagggcacaaaggggacaaaggtgaacgaggtagacctggcatt
actggacccaaaggagaagcgggacaaagaggagtcacagggtttcccggtgcagatgga
attcctggtcatccaggtcagggaggatcaagaggaaaaccaggccatgatggttgcaat
gggaccaagggagatccaggtccacagggaattcagggacctgccgggactcctgggttt
tttggaatccagggacccaaaggtcagaagggggagccttttgcactgcctgaagaatta
gctatacagttcaggggagaccctggtgactcaggcgtggttggcttcatgggacctcaa
ggtgctcctggactgttgggtgaacctggtctggaaggagactcaggtcttcctggactt
ccaggacccccaggacctccagggcccattggcaatagaggtcttggcttttatggaaag
aagggtgaaaagggtgaaattggacctcctggtccacctgggtgtacatcaacaggagaa
ttcgttggttcaatagatgaaattctaaatgaacacaagggaatgaaaggaaacaaagga
atgataggagaacctggatttccaggttttcctacacaagaagcagaaaagggagaagaa
ggaataactggctttccaggacaaagaggtttgccaggaatcaatggcctaaaaggagct
gaaggggatgtgggtaccccaggaaattatggattccagggcaatcctggccagaaaggg
atgaagggagaccctggagataaaggaatccgagggccaccaggtcacgcacaacatccc
acacttataaaaggtgtacctggtgaccggggattggatggcatcccaggccccgaggga
gagagaggaaccaaaggcagtcctggtccacctggtgcagaaggatcattcgatggtgtt
tctgagagaagaggctttcctggagaaatgggccccaaaggttttattggcgatcctggt
ttcccagctaatcgtcctggtcctcccggtttagatggtgaacctggaacacctggcttt
cctggcccccctggccccccaggaagtccaggttattccgttgggctgaagggatatcca
ggagttccaggtcctgcaggccagcaaggttatccaggcccacaaggacaaaaaggactg
aaaggtgatacaggagattgcaaatgtgttgaacagatcgaaggaagaaggggtcctgca
ggacaacctggtcctccaggattccaaggtccaataggatatgttgggagaaaaggggaa
ttaggagatcaaggctaccatggacttccaggctttactggtggaaaggggttacctggt
gaacctggaccatctggaccaaaggggataaagggggattcccagtatgttaccataaaa
ggtgccaaaggagagccaggaactccaggaattcctggaagtcaaggagaagatggttca
ccaggcaggaatggcatagatggtttaccagggtttcctggtcttcggggtgatggcata
agaggaggacaaggggatcctggtagtgcaggccagccaggcccaaaaggttttcctggt
gaaactggtctgcctggtgtgagtttgcccggtccaaagggatatcgtggtcctacaggt
gaccttggcacatatggaaaccctggctttcaaggccctcctggccctccaggcactcct
gctcggacagaatgtgggcaaacacaggaccactttcttagagataatagaacagaatca
attcattcagggaccagttgtgttatggcccccaaaggagctccggggtacccaggacca
cctggactaccaggtgcaaagggtacaaaagggattcctggtgaatttggtttgcatgga
cctcaaggacctcaaggacttcaaggggatcaaggtcgtggaggtgcaggttcaccagga
ttcactggacccagaggaagcagaggtgccccaggaatccctggggaaaggggacttcaa
ggaaatcctggtttgccaggtttgctaggccgccttggggaaaaggggcttacaggtgat
gttctaggagcaccaccaggctttcctggagacaatgggccacctggattcccaggaaca
aaaggcttacaaggagatcaaggcttaccaggaattaaaggaagagatggcttccctggt
ctctctggatccaaagggaatcctggttttcgtgggcccactggcctgaccggtatccga
ggaccaccagcaacatttggattccccggactcccaggccagcaagggtctctgggtaga
aaaggctcacaaggatttgttggatcccctggtgtcagaggagaaccaggagagccaggg
aaagttggtcctgtagggatgaaaggtctgccaggggacaaaggtggacagggctttatt
ggaactaaaggaaaggctggggaaacgggtctccctggaacggctggaatgcctggtttc
ccaggtcttaaaggttctaaaggatctcgtggcattggaggtttcagtggtgctatgggg
ttcaaaggatggccaggacagaagggaatctatggagagaaaggcctccctgggaagcaa
ggtgctaaagggccatctggggaattcggattaaaaggattcccagggcagtttggagaa
caaggtacacctggagatccaggtattcctggggcttctggtgacagaggaaatgttgga
aacattggccttccaggaagaaaaggtgtgcatgggagcaaaggacttcctggattagat
ggtttgccgggttctaaaggcttgccaggatcaccaggtccagatggatatggcacatcg
ggttttataggtgctttgggtgagaagggtccagcaggagacccaagtcccattgaaggc
agtagaggacctcctggccagaaggggcaaagaggggatccaggatggagaggtttagct
ggcgctcctggaccagatggaagaccaggatttcctggagtctccaatatatctggtata
cctggtgatgtgggttcacctggttttgatggagtaccaggttaccctggagttccaggg
attccaggcacacctggctcatttgccatcaaaggagaagagggatcaataggagcggct
ggagaagatggtctaaaaggaataaaaggagcccagggcccagacggaagacctggaata
tcaggcttgcctggcgcaaaaggatataaaggtgaacaaggagtcatgggctttattggc
caaacaggaatttctggtgactttggtcccataggacctaaaggagatagaggccccact
ggttttcagggacctccaggttcccccggattgccacctttacttcctaaactggttgct
gagcgaggggcctcaggagcccctgggaaaataggcccccacggccctgcaggtgaaatg
ggtcctcatggtcccccaggagatccaggttttagaggcccgataggcaaaccaggagca
ccaggaagaggaggcatagctgcaactccaggcttcagaggtgatcaaggaggacaagga
ctgcacggcctagcaggctttgaaggtgcagcaggtgctcctggtactcctggtattcct
ggtatgccaggccgcagtgttaacataggttatcttcttgtgaagcacagccaatctact
caagagccaatgtgtccagagggcatgaggcaactttggagcggctacagtttattgtac
tttgaaggacaagacaaagcacacaaccaggatctcgggctggctgggtcatgtttggct
cgattcagcaccatgcctttcctttactgcaatccgggagacgtctgctactatgcaagt
cgtaatgataaatcctactggctctcaaccacagcctctcttccaatgatgcctgtggta
gaagaagaaatcaggccttatatcagtcgctgttctgtctgtgaagctcctgctcttgcc
attgctattcacagccaagatgttactattcctcactgtcctgaaggatggcgcagttta
tggattggttactctttcctcatgcacactgcagctggtgccgaaggaggagggcagtca
ctggtttctccaggtagctgcctggaagacttcagagccacaccattcattgaatgcaat
ggtgctcgggggacctgccactactttgcaaacaaatacagcttttggcttaccaccatt
gaccatcattttcaacactcaccttcttcagatactctcaaggctggactcatccgaaca
catataagcagatgccaagtgtgtatgaaaaatttgtaa
DBGET
integrated database retrieval system
