Notechis scutatus (mainland tiger snake): 113419560
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Entry
113419560 CDS
T09026
Symbol
COL6A3
Name
(RefSeq) collagen alpha-3(VI) chain
KO
K06238
collagen type VI alpha
Organism
nss
Notechis scutatus (mainland tiger snake)
Pathway
nss04510
Focal adhesion
nss04512
ECM-receptor interaction
nss04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
nss00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
113419560 (COL6A3)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
113419560 (COL6A3)
09142 Cell motility
04820 Cytoskeleton in muscle cells
113419560 (COL6A3)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
nss04147
]
113419560 (COL6A3)
00536 Glycosaminoglycan binding proteins [BR:
nss00536
]
113419560 (COL6A3)
Exosome [BR:
nss04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
113419560 (COL6A3)
Glycosaminoglycan binding proteins [BR:
nss00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
113419560 (COL6A3)
Hyaluronan
Extracellular matrix or blood plasma proteins
113419560 (COL6A3)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
VWA
VWA_2
Collagen
Kunitz_BPTI
VWA_3
fn3
Motif
Other DBs
NCBI-GeneID:
113419560
NCBI-ProteinID:
XP_026534802
UniProt:
A0A6J1UUZ6
LinkDB
All DBs
Position
Unknown
AA seq
2960 aa
AA seq
DB search
MRKYCHLIFATICCLLLLGNHEADAQVKNNVKIGAAADIIFLVDSSWSIGNEHFQLVREF
LYDVVKQLDVGENDFRFGLVQFSGSPHSEFQLNTYHTLQDVLFHISHMPYMGGGTKTGQG
LEFLIRNHLTKAAGSRASNGIPQIIIVLTDGRSQDDVALPSSILKTAEVNMFAIGVQDAV
EWELKEIASDPLDTHLFNLENFTALHGIIGDLVASIRSSMTPEMAGVEGGIKDITAQESA
DIIFLIDGSKNGAVTFSAIRDFIANLIERLSVGSELIRIGVVMFSDEPRTGFSLNSYTQK
VDILEAVKALSILGGEEANIGDALDFVMQNHFTHSGGSRIEEGVPQILVLISNIESSDDI
REGVLAMKQASIFSFCIGVQNADNAELQQIATDESFVFTALDTRNLGELQELLLPNIVGV
AQRLILLDAPTILTEVVEVNKRDIVFLIDGSTALGTAPFNAIRDFVIKIIGKMEVGPDLT
QVAVAQYADTVRPEFYLNSFQLRKDITATVRKMKPMGGATLNTGSALQFVKNNFFTSAAG
ARIDEGVLPMLILITGGVSRDDVLQPAQEIKRNGIVVLAVGARNVDRTELEQIAYAPSIV
FIPTEFRTIVLTNFISDVVSSIKSPPIRIVEIPSPEVVTKRDIVFLLDGSANVGNTNFPY
VRDFLVNLVNSLVVGIDDVRIGVVQFSENPKTEFFLNSFLTKADVLSRLRQLRLQGGSIL
NSGAALDFVRSNHFTEAGGSRKDENVPQVLVFLAAGPSADAFQDAANALARERVLTFCVG
VRNAKLAELQQIAFNPQIVYFKDEFSSLPALPQEIISPLTTYVSGDVEEVPSTSTENKID
ILFLIDGSLNVAGQFPAIREFLLQIISDLNVGPDIIRVAVAQFSDNVNVEFNFDTPSKIE
ILQKVRKMRMKGGKLLNIGAALDYAVKDIFVRRAGSRIEEGVPQFLVLLVAGTSDDTVDE
SADTVIRTGVITFVIQTKTSDPAELERIVYAPQFILKVDTLSQIGDIQHEIVNLLKTIEL
KPQATKKDVVFLIDGSQFAISEFPSISEFIERLVNNMNVGSDATRVAVIQFSDSPKVEFL
LNAHSTKEEVLAAVRRLTPKGGRQVNLGSALEYVSKNIFTRPSGSRIEEGAPQFLILIYS
HRPHDDTENPVHLIKQIGVAPLPIGKNVDPEEITKIALSSDYVFQVASYQDLPSLEQKML
TPLTTLTTQQIRKIIADTSRPTDIDSEAMDIVFLVDSSDDVRPDGLAHIRDFIYRIVQKL
DIQPNKVRIAVVQFSNEVFPEFDLKTYRTKESVLQSIRRLRHKGGSPLNVGKALDHVMKT
LFIRSAGSRREDGIPQHLILLLGGRSQDDISRPTILVQNSGIRILGIGTRQVDSVELQRI
TNNPQTAIIVRDFTELPAIEKRVRAAIDTVQPPTELPTEVISVDKKQGDIVFLLDSSINF
GRDNFHHVVEFIHDLIDAIYDEGDSIRVGLVQYNSDVSDEFFLKDFSDKERILEAVKRIA
YKGGRIANTGAGVKHIQAKHFVKEAGSRKDQNVPQIAVIVTAGKPEDDGETAVLGLSRSG
VRVFAVGVRNIVMNEITKLSSDSTTAFRAPTPQVLSELNEAVLVTLNDVMREQLCRGVVE
VSKDCNLDVILGFDVSNTIQGQNIFGVQTMLESTVEDILNRISQMPKISCTPNQAPTVRV
ALLAQTPSGVVEAFDFSEYQPELFEKFQALRNGGPYVLTADTLKSYQNKFKTAPTGSTKV
VIHLTDGIEGAMGPLAAASANLKKEGVKALILIGLDQVSNFKEAMKLEFGRGFTYNRPLQ
VNQMDLDFEVTEQLDNIAERSCCEIPCKCSGERGDNGFPGIVGQKGIPGENGYRGYPGDE
GGLGERGPPGINGTQGFQGCPGERGMKGGRGFPGEKGEIGENGLDGIDGEEGERGFPGVP
GERGSHGRQGGRGSKGEIGDSGDHGLRGDPGTFGTDSTDRGPKGEKGELGPAGELGRNGP
RGDAGGAGRDGALGRRGPPGIKGNKGAPGSPGFNGEQGIKGPQGPSGTTGIPGIQGDSGL
PGQRGSSGPGGTVGERGRSGPLGKKGEAGESGPKGPIGPPGPRGEMGDDGRDGAGNEGLR
GRTGQPGFPGYPGSRGVPGDHGDDGKSGPKGSSGERGPSGDPGQSGQKGESGYPGPSGLM
GNKGESRDHCTLIRNIKDKCPCCYGPKECPVYPTELAFALDTAAGGNADTFNRMKDTVMS
IVNNITITESNCPRGARVALVTYNNEVTTEIRFADSRKKKDLIKQIEDLQFVQTSKQRSL
ETAMAFVARNTFKRARSGFLMRKVAVFFTNGPTRASPALNEAVLRLYNAGVVPVFLTNRE
DRFLTNALQINNTGGQAFAFTGGAAQLAATLRKVFTCHICLDVCDPDPSCGIQRAGFGRD
RRAVPTDVDIDIAFILDSSESTTQMQFKEIKSYISYIVNQLEISSDPKVSQHHARVAIIQ
HAPFEFQSNSSISPVKVELSLTDYGPRDKLTDFIQNQMSQLYGTRAVATAVDYTMRHIFE
SAPNPRDHKVIVLMMTGGIEKEELEHLQNVIVEAKCKGYFVVIIGIGRNINIPSIYSLAS
EPNDVFFKYADMASELHEEPLLRFGNLLPSFINSENTFYLSPDIRKKCDLFQGDQPIKKF
GQKQLNIPNNVTVTPVVTEKLEVIKNNGEVKITDITENSAKLHWMIPEPQKVYTYHITVT
SAHDHSLVVKLNLTSNERVIGGLQSGEKYDVTITGYHNAQAKATYRGTFNTKSMPGAKIP
SAGKAAAAAAAATNVMVNTEPLEVPEKDPCLLDLDMGTQCKEYQVKWFFDYKNEICTQVW
YGGCGGNANRFETEADCISRCVKPSDEKDMQLPVLEKSHLSGQKVHMKNLPRRKFPRRKL
RSRAKKVAREVTDICQLKKKDGPCRKFVLKWYFDPKTASCARFWYGGCDGNENRFDTQKD
CENVCLSAHIKSGVVTMIGT
NT seq
8883 nt
NT seq
+upstream
nt +downstream
nt
atgaggaagtactgccatttgatttttgcaacaatctgttgtcttttactcttaggcaat
catgaggctgatgcacaggttaaaaataatgtcaaaatcggtgctgctgctgatataata
tttctagtggattcctcttggagcattggaaacgaacatttccaacttgttcgggagttt
ttgtatgatgttgtaaaacaattagatgtgggtgaaaatgattttcggtttggtctggtc
cagttcagcggaagcccacattcagagttccagttaaacacctatcatactttgcaagat
gtcctcttccatatttcacacatgccttacatggggggaggaaccaagactggacaagga
ttagagttcctaattcggaaccatctaactaaagctgctggaagcagagcaagcaatggc
attccgcagattattatagtgttaaccgatggacgatcccaagatgatgtggctctacca
tcatctatacttaaaactgctgaggtaaacatgtttgccattggagtgcaggatgcagtg
gaatgggaattaaaggaaatagcaagcgacccccttgatacacacctattcaacctagag
aactttactgctctccacggcattataggagacttagttgccagcattcgctcatccatg
actccagaaatggctggagtagaaggagggattaaagacatcacagcacaagaatctgct
gacattattttccttattgacggatcaaagaacggcgctgtcactttctcagccattcgt
gatttcattgcaaatttaattgaaagactctcagttggatctgagctcatacgcattggg
gtggttatgtttagtgatgaacccagaactggattctccttgaacagctacacccaaaaa
gttgatattctagaggcagtgaaggcccttagcattcttggtggcgaggaagctaatatt
ggagacgctcttgattttgtcatgcaaaaccacttcacccactcaggaggcagcagaata
gaggaaggtgtgccacagattttagtgctcataagtaacattgagtctagtgatgacata
agagaaggagttttagccatgaagcaagctagtatattctcattttgcattggggtccaa
aatgctgacaatgcagagcttcagcaaattgctactgatgaaagcttcgtatttactgcc
ctggatacacgtaaccttggtgaacttcaagaactcttactgccaaacattgttggagtg
gcccaaaggctcattttgttagatgccccaaccattcttacagaagttgttgaagtcaat
aagagagacatagtcttcctgatagatggttctactgcattgggaactgccccctttaat
gcaattcgtgatttcgtgatcaaaatcatcggcaaaatggaagttggaccagatctcact
caagttgcagtggcacaatatgcagatactgtaagaccagaattttatttaaatagcttc
cagttaagaaaagatatcaccgccactgttaggaaaatgaaaccaatgggtggtgccaca
cttaatacaggctcagcactgcagtttgttaaaaacaacttcttcaccagtgccgctgga
gccaggattgatgaaggtgtgcttcccatgttgattctgatcactgggggtgtgtccaga
gatgatgttctccaaccagcacaagaaattaaaaggaacggcatcgtggtccttgctgtg
ggagcccgaaatgttgatcgtaccgaacttgaacaaattgcctatgcaccaagcatagtt
ttcatccccacagaattccgcacaattgtactaacaaacttcatttctgatgttgtgtca
tctataaagtcaccccctataagaattgtggaaataccatcaccagaagttgtaaccaaa
agagatatcgtctttcttttggatggatcagccaacgttggaaataccaacttcccatat
gtccgtgactttcttgtgaacctagttaattctcttgttgttggaattgatgatgtacga
atcggcgtagtacaatttagtgagaaccccaaaacagaattctttttaaactccttccta
accaaggcagatgtcctttctcgtctgaggcagttgagactgcaaggagggtcaattctg
aattcaggagctgcactagattttgtgcgttccaatcacttcactgaagcaggcgggagc
aggaaagatgagaatgtccctcaagtgctagtcttccttgcggcagggccatctgctgat
gccttccaagatgccgccaatgccttagctcgtgagagagtgctcaccttttgtgttggg
gttaggaacgccaaactagcagaacttcagcagattgcatttaatccacaaatagtatat
tttaaggatgaattcagctctctgccagctttaccacaggaaattattagtccactaaca
acatatgttagtggagatgtggaagaagttccaagcacatcaacagaaaacaagattgat
attttatttttgattgatggctcattgaacgtggctggccagtttcctgctattcgagag
tttctgctccaaattatttctgacctgaatgtggggccagatattatacgagtagctgta
gcacaatttagcgacaatgtaaacgtggagttcaactttgacaccccatccaagatagaa
atccttcagaaagtgagaaagatgaggatgaaaggaggaaagctactaaacattggagct
gcactagattatgctgtaaaagacatctttgtaagacgtgctgggagcaggattgaagaa
ggcgtgccacaattcctggttcttcttgtggctgggacatcagatgacactgtggatgaa
agcgctgataccgtgatacgaactggtgtgattacttttgttatccaaaccaagacctct
gatccagctgaattagaaaggatagtttatgcccctcagttcattctaaaggttgatacc
ctttctcaaattggagacatacaacacgaaatagtcaatctattgaaaaccatagaactt
aaacctcaagctacaaagaaagacgtcgttttccttattgatggctctcagtttgcaatt
tctgagttcccttcaattagtgaatttatcgaacggctcgtaaacaatatgaatgtgggt
tcagatgctactcgagtagctgtaattcaattcagtgatagtcccaaagttgaatttttg
ctgaatgcacattctactaaggaggaggtgctagctgcagtgagaagactaactcccaaa
ggtgggaggcaagtgaatcttggttctgccttagaatatgtgtcaaagaatatctttaca
aggccttctgggagccgcatagaggaaggagcacctcagtttttaatccttatttattct
caccgacctcatgatgatacagaaaacccggtacacctgatcaaacagattggtgtggct
ccgcttcctattggaaagaatgtggatcctgaggaaattaccaaaatagcacttagttct
gattatgtgtttcaagtggcaagttaccaagatctacctagtttggaacagaaaatgtta
acccctcttacaacattaactacccaacagatacgaaaaatcattgctgatacaagtcgc
cctacagacattgacagtgaagccatggacatcgtcttccttgttgatagctctgatgat
gtcagaccagatggacttgctcatattcgtgatttcatttaccggattgtccaaaagcta
gatatccaaccaaacaaagtgagaattgctgttgtccagtttagcaatgaagtgtttccc
gagttcgacttaaaaacctaccggaccaaagagagtgtactacaaagcatacggcgctta
aggcacaaaggtggttctcccctgaatgttgggaaagctctggaccatgtcatgaagaca
ctcttcatcagatcagcaggaagtaggcgagaagatggaatcccccagcatttaatcctc
ttgcttggagggagatcccaggatgatatcagcaggcctactattctggtgcagaactct
gggattcgtattctgggaattggaacaagacaagtagacagtgtggaattgcaaaggatc
accaacaatccccaaactgcaattattgtgagagattttactgagctcccagcaatagaa
aaacgggtccgtgcagcaattgatacagtacaaccaccaactgaactacccactgaagtt
atctctgttgataagaaacaaggtgatattgtcttcttgctggatagctctatcaatttt
gggagagacaatttccaccatgttgttgaatttatacatgacttaatcgatgctatttat
gatgaaggcgattccattcgagttggtttagtgcaatacaactctgatgtgagtgatgaa
ttctttctgaaggatttctctgacaaggaacgtatcttagaagcagtgaaaaggatagcc
tacaaaggaggcagaattgccaacacaggagcaggtgtcaagcatatccaagcaaaacat
tttgtgaaggaggctggcagcaggaaagaccagaatgtccctcagattgctgtcattgta
acagcaggcaagccagaagatgatggggagacagcagtcttagggctgtcccggtcgggt
gtcagggtcttcgcagttggtgtgagaaacattgttatgaatgaaattacgaagctctcc
agtgacagcacaacagcttttagggctccaactccccaggtcctctcagagctcaatgag
gctgttctggtgaccctgaatgatgtcatgagagaacagttatgtcgtggtgtggtggaa
gtctccaaagattgcaatctggatgttatacttggatttgatgtttcaaatactatacaa
gggcaaaacatattcggtgtacaaaccatgctggaatcaacggttgaagatattctgaac
aggatcagtcaaatgccgaaaatcagctgcactcccaaccaagcacccacagtgcgtgta
gcacttctggcacagactccctctggagttgtagaagcctttgatttctcagagtatcag
ccagagttgtttgaaaagttccaagccttgcgaaatggcggaccgtatgtgctcacagca
gacaccctcaagtcttaccagaataaatttaaaacagctcctactggaagtacaaaggtg
gtgatccatctaactgatggtattgagggtgctatgggaccactggcagctgcatcagct
aatctaaagaaagaaggtgtcaaggctcttattcttattgggttggaccaagtatctaat
tttaaagaagcaatgaaactggaatttggacgcggctttacttacaataggcctctccaa
gtgaatcagatggatttagattttgaagtgacagaacaattggacaacattgcagaaaga
tcatgttgtgaaatcccatgcaaatgttctggagaacggggagacaatggatttccaggc
atagttggacaaaagggaattccaggggaaaatggctatcgaggctatccaggagatgaa
ggtggactgggtgaacgtggacctcccgggataaatggaactcaaggtttccaaggctgc
cctggtgaaaggggaatgaaggggggccgtggattcccaggagaaaagggtgaaataggg
gaaaacgggcttgatggaatagatggagaagagggagagagaggctttccaggtgttcct
ggggagagggggagccatggtagacagggtggcagaggaagcaaaggagaaataggagac
tcaggtgaccatggacttcgaggcgatccgggtacttttggaaccgatagcactgacaga
ggacccaaaggcgaaaagggagaacttggaccagcgggagaacttggaagaaatggacca
cgaggtgacgcaggaggagctggaagagatggagcacttggcagaagaggaccacctggg
attaaaggaaataaaggtgcccctggctcaccaggatttaatggggaacaaggaattaaa
ggtccccagggaccatctggcacaactggaatccctggcattcaaggagactccggcctc
cctggtcaaaggggttctagtggtccaggtggaaccgttggggagcgtggtaggtctggt
cctcttggtaaaaagggtgaagctggtgagtctggtccaaaggggcccattggtcctcct
ggtccccgaggagaaatgggagatgatggacgagatggagctggcaacgaaggactgaga
ggcagaacgggacaacccggtttcccaggatacccaggatcacggggtgtacctggagat
catggtgatgatggtaaatctggccccaaaggaagcagcggtgaacggggaccttcaggg
gaccctggccaaagtggacagaaaggagagagtggctatccaggaccatctggacttatg
ggtaacaaaggagagtctagagatcactgcacgctgatacgcaacatcaaagataaatgc
ccttgctgttatggtccaaaagaatgtcctgtttatccaactgaattggcctttgctctt
gatactgccgctggtggaaatgcagacactttcaatagaatgaaggacacagtaatgtca
attgttaacaatatcacaattacagaaagcaactgccccagaggtgcccgggtagcactg
gttacatacaacaatgaagttaccactgagatacgttttgctgacagcagaaagaagaag
gatttgataaaacaaatcgaggacctccaatttgttcagacctccaaacaacgtagctta
gaaacagccatggcatttgtggccaggaatactttcaagcgtgcacgtagcggcttcctt
atgaggaaagttgctgtgttcttcaccaatgggccaacaagagcatctccagcgttgaat
gaagcagtactaagactctacaatgctggagttgtacctgtattccttacaaacagagag
gacaggttccttaccaacgcattacagataaataacaccggtggacaagcttttgcattt
actggtggcgctgctcaattggccgcaactcttagaaaagtgttcacatgccatatttgt
ctagatgtatgtgatcctgatcccagctgtggtatccagagggctggctttggaagagac
agacgggcagttcctacagatgttgacattgatatagcattcatcctggatagctctgag
agtaccactcaaatgcagttcaaagaaattaagagctacatttcatatattgtaaaccaa
ctggaaattagttctgatcccaaggtatcacaacatcatgctagggttgccattatccaa
catgctccttttgaatttcaatcaaactcaagcatatctcctgtcaaagttgaattgtca
ctcacagattatggcccaagggacaaattaacagatttcattcagaaccaaatgtcacaa
ttgtatggaacacgggctgtggcgactgcagtagactatacaatgaggcatatttttgag
agtgcaccaaatcccagagatcacaaagtcattgttttgatgatgacaggaggcattgaa
aaggaagaacttgaacaccttcagaatgttattgtagaagctaaatgtaagggatatttt
gttgtcattattggcattggtaggaatattaatattccaagtatctacagcttggcaagt
gagcctaatgatgtcttcttcaaatatgctgatatggcgtcagaacttcatgaagagcca
ttgctacgttttggaaacctcttaccatccttcatcaatagtgaaaataccttttactta
tctccagatatcaggaaaaaatgtgatttgttccagggtgaccagccaatcaaaaaattt
ggccaaaaacaactaaatattccaaataatgttactgtcacacctgttgtaacagaaaaa
ttggaagtgattaaaaataatggagaagtcaagataactgatataactgaaaacagtgct
aagctgcattggatgattcctgagcctcagaaagtctatacctatcacatcacagtcacc
tcagcacatgaccactccttagttgtgaagcttaatttaactagcaatgaaagagtcatt
ggaggtcttcagagtggagaaaagtatgatgttactatcacaggctaccataatgcccag
gccaaagctacttataggggaacatttaatacaaagagcatgccaggagccaagatccct
tcagcaggaaaagcagcagcagcagcagcagcagcaaccaatgtaatggtgaacactgaa
cctttggaagtccctgaaaaagatccttgcttactggaccttgacatgggcacgcagtgc
aaggagtatcaggttaagtggttctttgactacaaaaacgagatctgcacccaggtttgg
tatggtgggtgtggcggtaatgccaatagatttgagacagaagctgactgcattagcaga
tgtgtgaagccatcagatgagaaagacatgcagcttcctgttcttgagaaaagtcatttg
tcaggacagaaagtgcacatgaagaatttacccaggaggaaatttccaagaaggaaatta
agaagcagagcaaaaaaggtagcaagagaagtcacagatatctgtcagttgaagaaaaaa
gatggtccttgcaggaaatttgttctaaaatggtattttgatccaaagactgcaagttgt
gctagattctggtatggtggctgtgatggaaatgaaaatagatttgacacacaaaaagac
tgtgaaaacgtctgtctttcagctcacatcaagtctggtgttgtgacaatgattggaact
taa
DBGET
integrated database retrieval system
