Notechis scutatus (mainland tiger snake): 113419595
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Entry
113419595 CDS
T09026
Symbol
TRIM13
Name
(RefSeq) E3 ubiquitin-protein ligase TRIM13
KO
K12003
tripartite motif-containing protein 13 [EC:
2.3.2.27
]
Organism
nss
Notechis scutatus (mainland tiger snake)
Brite
KEGG Orthology (KO) [BR:
nss00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
nss04131
]
113419595 (TRIM13)
04121 Ubiquitin system [BR:
nss04121
]
113419595 (TRIM13)
Enzymes [BR:
nss01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
113419595 (TRIM13)
Membrane trafficking [BR:
nss04131
]
Autophagy
ER-phagy
Other ER-phagy associated proteins
113419595 (TRIM13)
Ubiquitin system [BR:
nss04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
113419595 (TRIM13)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-B_box
zf-RING_UBOX
zf-C3HC4
zf-RING_2
zf-C3HC4_4
zf-RING_5
RING_XB3-XBAT31
zf-C3HC4_2
zf-C3HC4_3
zf-RING_4
NagJ_C
GlnD_UR_UTase
Motif
Other DBs
NCBI-GeneID:
113419595
NCBI-ProteinID:
XP_026534860
Ensembl:
ENSNSUG00000001176
UniProt:
A0A6J1UV74
LinkDB
All DBs
Position
Unknown
AA seq
407 aa
AA seq
DB search
MELLEEDLTCPICCGLFDDPRALPCSHNFCRKCLEGILEGNTRNVIWRPSPFKCPTCRKE
TTVTGVNNLQVNYSLKGIVEKYNKIKISTKMPVCKVHSGQPLNIFCQTDTQLICGICATR
GDHIKHLFCSIEDAYCQEKRAFETLSQVFEAWHCGDALSRLATLETSKRKALQMLTKDYD
RVKDFFEKLQYTLEQKKNEILSDFETMKLAVMQAYDPEINKLNTIIQEQQTVFNIAETFK
DVSEPILFLQQMQEFREKIKVIKETRLPCVTVDIKSTIKDVDTSQWEQFKLADVDKLSLP
QEKSSFNWMTNTFLSARFLVTALICLLIVITQVCVTDFWGKTFQYWKTFVSAFGTGYLTD
PTEMADHAILYWEKVADSAAILSEKCVNYIHVLLNNVAQFVCMYKLL
NT seq
1224 nt
NT seq
+upstream
nt +downstream
nt
atggagctccttgaagaagaccttacatgtcccatttgttgtggcttgtttgatgatcca
cgagcattaccttgttcacataacttctgtagaaaatgtttggaagggatcttagaggga
aatactcggaatgttatttggagaccatcaccttttaaatgtccgacatgtcgaaaggaa
actacagtaacaggggttaataatctccaggttaactattcactaaaaggcattgtcgaa
aaatataacaagattaaaatatcaacaaaaatgcctgtctgtaaagtgcacagtggtcag
cctcttaatattttttgccagacagacacacaacttatatgtggcatttgtgccactcga
ggagatcacataaaacatctcttttgctctattgaggatgcttactgtcaagaaaagcgt
gcttttgagacactgtcccaagtgtttgaagcatggcattgtggagatgcactttctcga
ctagcaactttggaaaccagcaaacgaaaagctctccagatgttgacaaaggattatgac
agagtaaaagatttttttgagaaattacaatatactttggaacaaaagaagaatgagatc
ctctcagactttgaaaccatgaagcttgcagttatgcaggcttatgatccagaaatcaac
aagctgaacactatcatacaagaacagcaaactgtgtttaatattgcagaaacatttaag
gatgtatctgaacccattttgtttttacaacagatgcaagagtttagagagaaaatcaaa
gtgataaaggaaactagattgccttgtgttactgtagacatcaaatctacaattaaggat
gttgatactagtcagtgggaacaatttaagctagcagatgtggataaactttcactacct
caagagaaaagctctttcaattggatgacaaataccttcctttcagcacgttttttagta
actgctttaatttgtttactgattgttattactcaagtatgtgttacagatttttggggc
aaaacttttcagtattggaaaacttttgtttctgcgtttggcacaggttatctgacagac
ccaacagagatggcagatcatgctattttatactgggaaaaagtagcagatagtgctgct
attttaagtgaaaaatgtgtaaattatatccatgtgttgttgaataatgttgcccaattt
gtgtgcatgtacaaacttttatga
DBGET
integrated database retrieval system
