Notechis scutatus (mainland tiger snake): 113419932
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Entry
113419932 CDS
T09026
Symbol
SMARCA4
Name
(RefSeq) transcription activator BRG1 isoform X1
KO
K11647
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 2/4 [EC:5.6.2.-]
Organism
nss
Notechis scutatus (mainland tiger snake)
Pathway
nss03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
nss00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
113419932 (SMARCA4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
nss03021
]
113419932 (SMARCA4)
03036 Chromosome and associated proteins [BR:
nss03036
]
113419932 (SMARCA4)
Transcription machinery [BR:
nss03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
113419932 (SMARCA4)
Chromosome and associated proteins [BR:
nss03036
]
Eukaryotic type
Histone modification proteins
HDAC complexes
REST complex
113419932 (SMARCA4)
Chromatin remodeling factors
BAF complex
113419932 (SMARCA4)
PBAF complex
113419932 (SMARCA4)
GBAF(ncBAF) complex
113419932 (SMARCA4)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
SnAC
Bromodomain
HSA
BRK
QLQ
ResIII
HDA2-3
DEAD
DUF2009
Motif
Other DBs
NCBI-GeneID:
113419932
NCBI-ProteinID:
XP_026535339
Ensembl:
ENSNSUG00000015471
UniProt:
A0A6J1V6C4
LinkDB
All DBs
Position
Unknown
AA seq
1643 aa
AA seq
DB search
MSTPDPPMGGTPRPGPSPGPGPSPGAMLGPSPGPSPGSAHSMMGPSPGPPSAGHSIPPQG
PGGYTQDNMHPMHKPMDSMHEKGISEDPRYSQMKGMGMRAGGHTGMGPPPSPMDQHSQGY
PSPLGGSEHASSPVPANGPSSGPQMPSGPGGVPLDGTDPQALGQQNRGPTPFNQNQLHQL
RAQIMAYKMLARGQPLPDHLHMAVQGKRPMPGMQQQMPTLPPPSVSGTGPVQGPGPAPGP
TPPNYNRPHGMGGPNMPPPGPSGVPPGMPGQPPGGPPKPWPEGPMANAAAPTSTPQKLIP
PQPTGRPSPAPPAVPPAASPVMPPQTQSPGQPAQPAPMVQFHQKQNRITPIQKPRGLDPV
EILQEREYRLQARIAHRIQELENLPGSLAGDLRTKATIELKALRLLNFQRQLRQEVVVCM
RRDTALETALNAKAYKRSKRQSLREARITEKLEKQQKIEQERKRRQKHQEYLNSILQHAK
DFKEYHRSVTGKIQKLTKAVATYHANTEREQKKENERIEKERMRRLMAEDEEGYRKLIDQ
KKDKRLAYLLQQTDEYVANLTELVRQHKAAQVAKEKKKKKKKKKAEVVEGQTPAIGPDGE
PLDETSQMSDLPVKVIHVESGKILTGTDAPKAGQLDTWLEMNPGYEVAPRSDSEESGSEE
EEEEEEEEQPQPAQSALPVEEKKKIPDPDSDDVSEVDARHIIENAKQDVDDEYGVSQALA
RGLQSYYAVAHAVTERVDKQSSLMVNGVLKQYQIKGLEWLVSLYNNNLNGILADEMGLGK
TIQTIALITYLMEHKRINGPFLIIVPLSTLSNWAYEFDKWAPSVVKVSYKGSPAARRAFV
PQLRSGKFNVLLTTYEYIIKDKHILAKIRWKYMIVDEGHRMKNHHCKLTQVLNTHYVAPR
RLLLTGTPLQNKLPELWALLNFLLPTIFKSCSTFEQWFNAPFAMTGEKVDLNEEETILII
RRLHKVLRPFLLRRLKKEVEAQLPEKVEYVIKCDMSALQRVLYRHMQAKGVLLTDGSEKD
KKGKGGTKTLMNTIMQLRKICNHPYMFQHIEESFSEHLGFTGGIVQGLDLYRASGKFELL
DRILPKLRATNHKVLLFCQMTSLMTIMEDYFAYRGFKYLRLDGTTKAEDRGMLLKTFNEP
GSEYFIFLLSTRAGGLGLNLQSADTVIIFDSDWNPHQDLQAQDRAHRIGQQNEVRVLRLC
TVNSVEEKILAAAKYKLNVDQKVIQAGMFDQKSSSHERRAFLQAILEHEEQDETRYSTGS
GSGSASFPHTASTLCLNSDSEEPPLKEEDEVPDDETVNQMIARHEEEFDLFMRMDLDRRR
EEARNPKRKPRLMEEDELPSWIIKDDAEVERLTCEEEEEKMFGRGSRHRKEVDYSDSLTE
KQWLKVYMAIEEGTLEEIEEEVRQKKSSRKRKRDVDVSSSTPTTSTRSRDKDDDSKKQKK
RGRPPAEKLSPNPPNLTKKMKKIVDAVIKYKDSSGRQLSEVFIQLPSRKELPEYYELIRK
PVDFKKIKERIRNHKYRSLNDLEKDVMLLCQNAQTFNLEGSLIYEDSIVLQSVFTSVRQK
IEKEEDSEGEESEEEEEGEEEGSESESRSVKVKIKLGRKEKVPDRMKGRRRTSRGSRAKP
VVSDDDSEEEQDEDRSGSGTEDD
NT seq
4932 nt
NT seq
+upstream
nt +downstream
nt
atgtctactcctgatcctccaatgggagggacacctcgtcccggaccttctcctgggcct
ggtccttctcctggtgctatgctgggccctagtcctgggccatccccgggttctgcacac
agtatgatgggtcccagcccaggaccaccatcggcagggcactctataccaccacaaggg
cctggaggttatactcaggataacatgcatccgatgcataagccaatggattccatgcat
gaaaagggaatatctgaagaccctcgttacagtcaaatgaagggcatgggaatgagggct
ggtggacacacaggaatgggacccccaccaagtccaatggatcagcattctcaaggttac
ccttctccacttggtggttctgagcatgcatcaagtccagttccagctaatggcccttct
tctggcccccagatgccatctggccctggtggagtcccattagatggtactgatccccaa
gcattagggcagcagaatcgaggcccaactccttttaaccagaatcaactgcatcaattg
agggctcagatcatggcctacaagatgcttgccagagggcagccgttacccgaccatctt
cacatggctgtgcagggaaaaaggccaatgcctggaatgcagcagcaaatgccaactcta
cctccaccttctgtatctggaacaggaccagtgcaaggaccagggcctgcacctggacca
acacctccgaactacaacagacctcatggtatgggagggcctaatatgccccctcctgga
ccctcaggagttcctccaggaatgcctgggcagccccctggtggaccacctaagccctgg
ccagaaggaccaatggcaaatgctgcagcccctactagcacacctcagaaactgattcct
cctcagccaacaggccgtccttcaccagcacccccagcggtacctccagcagcatcccct
gtcatgcctccccaaactcagtcacccgggcaaccagcccaacctgccccaatggtgcag
ttccatcagaagcagaaccgtatcactccaatccagaagccgagaggacttgatccagtt
gaaatccttcaagagagagaataccgcttgcaggctcgcattgctcatagaatccaagaa
cttgaaaatcttcctgggtccctggctggagacctgcgaaccaaagcaaccattgaactt
aaagccctacgactgctgaatttccagagacagctgcggcaagaagtcgtggtctgtatg
agaagggatactgccctggaaacagccctgaatgctaaggcatataagcgcagcaaacgg
caatctctacgggaagctcgcatcactgagaagctggaaaaacagcagaagattgaacaa
gaaagaaaacgccggcaaaaacaccaggagtacctcaacagcattctccagcatgccaag
gatttcaaagaataccatcgatcagtcaccggcaagattcagaagctgacaaaggctgtg
gccacttaccatgcgaatacggagcgtgaacagaagaaggagaacgagagaattgagaag
gagagaatgcgccggttgatggctgaggatgaagaagggtaccgaaagcttattgatcaa
aagaaagataaacgcttagcctacctgcttcagcagacagatgaatatgtggccaacctc
acagaactggtgagacagcacaaggctgcacaggtggcaaaggagaagaagaagaagaag
aaaaagaagaaggctgaggttgtggaaggacagaccccagcaattggacccgatggtgaa
cctttagatgaaaccagccaaatgagtgatctccctgtgaaagtgattcatgttgaaagt
gggaaaattcttactggcacagatgcaccaaaggctgggcagctggatacctggttagaa
atgaaccctggatatgaagtagcaccaagatctgacagcgaagaaagcggatcagaggag
gaagaagaggaggaagaggaagaacaacctcagcctgctcagtctgctctgcctgtagag
gagaagaaaaagattccagatccagacagtgatgatgtatcagaagtggatgcaaggcac
attattgagaacgccaagcaagatgtggatgatgagtatggtgtgtctcaggccctggca
agggggttgcagtcttactatgctgtggctcatgcagtcactgaaagggtggacaaacag
tcatccctcatggtgaacggtgtcctcaaacagtatcagatcaaaggattagaatggctg
gtatcattgtacaataataatctcaatggcatcctggctgacgaaatgggcctgggtaag
acaatccagaccattgctttaattacatacctcatggaacacaaacgaatcaacggaccc
ttcctcattatagtacctctgtcaactctatcaaattgggcctatgaatttgataagtgg
gctccttctgtggttaaagtctcatataagggctctccagctgcaagaagggcctttgta
cctcagcttcgaagtggaaagtttaatgttttgcttactacatacgaatatatcatcaaa
gacaaacacattcttgcaaaaattcgttggaaatacatgattgttgatgaaggtcaccgg
atgaagaatcaccattgcaagctaacccaggttctgaatacacactacgtagccccacgt
cgtttgctgctgacaggaactccactacaaaataagctaccagaattatgggctctgctc
aatttcctccttccaactatcttcaaaagttgtagcacatttgaacagtggtttaatgct
ccatttgccatgactggagaaaaggtggatttgaatgaggaagaaactattctaattatc
cgtcgtttgcacaaagttttgcgccccttcctactgagaaggttaaagaaggaagtggag
gcacagctacctgaaaaggtagaatatgttattaagtgtgatatgtctgcattacaaaga
gtgctttataggcacatgcaagcaaagggtgtgctgcttacagatggatctgagaaagac
aaaaagggcaaaggtggtacaaaaacgctcatgaacactattatgcagctgcggaagatt
tgcaaccatccatatatgtttcagcatatagaggagtccttttctgagcatttaggcttc
actggaggcattgtgcaaggtcttgatctctatcgagcttctgggaaatttgagcttcta
gatcgcattcttcccaagttgcgagctaccaaccacaaggtactgctcttctgtcagatg
acctctctcatgaccataatggaagattattttgcctaccgtggattcaaatacctcagg
ctagatgggaccactaaagctgaagatcgtggcatgctgctgaaaactttcaacgagcca
ggctctgaatatttcatttttcttctgagcacccgagcagggggtttgggactgaatctg
cagtctgctgatactgtgattatttttgacagtgactggaatcctcaccaggacctgcag
gcacaggatcgagcacatcgcattgggcagcaaaatgaagtgcgagtgctgcgcctgtgc
actgtgaacagcgtggaagagaagatacttgctgcagccaagtataagctgaatgttgat
cagaaggtgatccaggctggaatgtttgaccagaagtcttccagccatgaaaggcgagct
ttcctacaggctatcttagagcatgaggagcaagatgagaccagatacagcacgggcagc
ggcagtggcagcgcaagctttccccacactgcctcaaccctgtgcctcaactccgactcg
gaggagccacctttaaaggaagaagatgaagttccagatgatgaaacagttaaccagatg
attgcccgtcatgaggaggagtttgatctttttatgcgcatggatttggatcgcaggcga
gaggaggcccgcaatcctaagcgaaagccacgattgatggaggaggatgagttgccctct
tggataattaaagatgatgcagaagtagaaagactaacctgtgaggaggaggaagagaag
atgtttggtagaggttcccgtcaccgtaaggaagtggattatagtgattccctgactgag
aagcaatggctcaaggtatacatggccatagaagagggtaccctagaggagatcgaagag
gaggtgcgtcagaagaaatcctcccgcaagcgcaagagagatgtggatgtcagttcctcc
accccgaccaccagcacccgtagccgggacaaagacgatgacagcaaaaaacagaaaaag
cgtggacggcctcctgccgagaagctctctccaaatccacccaacctcactaagaagatg
aagaagattgtggatgcggtgattaagtataaagacagcagtggacgtcagcttagtgaa
gtcttcattcaactgccttctcgaaaagagcttccagaatattatgaactcattcgcaaa
ccagtggatttcaagaaaataaaggagcgtatccggaaccacaaatatcgcagcctgaat
gatttggagaaggatgtcatgcttctatgtcagaatgctcagactttcaatctcgaagga
tccctgatttatgaagactcaattgtactgcagtctgtctttactagtgtgaggcaaaaa
attgaaaaagaggaagacagcgagggagaagagagtgaagaggaggaagagggagaagag
gaaggatctgaatcagaatctcgttctgtcaaagtgaagattaaactgggcagaaaggaa
aaagtaccagaccgaatgaaaggccgcagacgcaccagccgcgggtcccgggctaaaccc
gtagttagtgatgatgatagtgaggaagagcaagacgaggatcgctcaggaagtggcaca
gaagatgactag
DBGET
integrated database retrieval system
