Notechis scutatus (mainland tiger snake): 113420064
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Entry
113420064 CDS
T09026
Symbol
DHX8
Name
(RefSeq) ATP-dependent RNA helicase DHX8
KO
K12818
ATP-dependent RNA helicase DHX8/PRP22 [EC:
5.6.2.6
]
Organism
nss
Notechis scutatus (mainland tiger snake)
Pathway
nss03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
nss00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
113420064 (DHX8)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
nss03041
]
113420064 (DHX8)
Enzymes [BR:
nss01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
113420064 (DHX8)
Spliceosome [BR:
nss03041
]
Complex C
Other components
Step II factors
113420064 (DHX8)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
OB_NTP_bind
HA2_C
S1
Helicase_C
HA2_N
DEAD
GIPC1_GH2
AAA_22
AAA_19
nSTAND3
AAA_16
Flavi_DEAD
T2SSE
ABC_tran
PhoH
TsaE
OB_RRP5_4th
Presenilin
Cas3-like_C_2
SAGA-Tad1
Motif
Other DBs
NCBI-GeneID:
113420064
NCBI-ProteinID:
XP_026535619
Ensembl:
ENSNSUG00000017212
UniProt:
A0A6J1V739
LinkDB
All DBs
Position
Unknown
AA seq
1184 aa
AA seq
DB search
MADPTEELATLEYLSLVSKVCTELDNHLGINDKDLAEFVINLAERNTNFDTFKTALVKNG
AEFTDSLVSNLLRLIQTMRPPAKASTSKDIIKPKTEKDKLKDLFPALCRPDNPMVRTMLD
EDDVKVAADALQELEALMPSASRQEKHRNNENQAKKKHRSRSRSRDRKRKRKSSSRSRTR
ERHKGKSRYRSRSRSPSWDHKERERAGEKSSERWRDKHVDRPPPEEPSIGDIYNGKVTSI
MQFGCFVQLEGLRKRWEGLVHISELRREGRVANVADVVSKGQRVKVKVLSFTGSKTSLSM
KDVDQETGEDLNPNRRRNLIGESEETAMRNPDRPTHLSLVSAPEVEDDTLERKRLTRISD
PEKWEIKQMIAANVLSKEEFPDFDEETGILPKVDDEEDEDLEIELVEEEPPFLRGHTKQS
MDMSPIKIVKNPDGSLSQAAMMQSALAKERRELKQAQREAEMDSIPMGLNKHWVDPLPDV
DGRQIAANMRGIGMMPNDIPEWKKHAFGGNKASYGKKTQLSIIEQRESLPIFRLKDQLIQ
AVHDNQILIVIGETGSGKTTQITQYLAEAGYTTRGKIGCTQPRRVAAMSVAKRVSEEFGC
CLGQEVGYTIRFEDCTSPETVIKYMTDGMLLRECLIDPDLTQYAIIMLDEAHERTIHTDV
LFGLLKKTVQKRQDMKLIVTSATLDAVKFSQYFYEAPIFTIPGRTYPVEILYTKEPETDY
LDASLITVMQIHLTEPPGDILVFLTGQEEIDTACEILYERMKSLGPDVPELIILPVYSAL
PSEMQTRIFDPAPPGSRKVVIATNIAETSLTIDGIYYVVDPGFVKQKVYNSKTGIDQLVV
TPISQAQAKQRAGRAGRTGPGKCYRLYTERAYRDEMLTTNVPEIQRTNLASTVLSLKAMG
INDLLSFDFMDAPPMETLITAMEQLYTLGALDDEGLLTRLGRRMAEFPLEPMLCKMLIMS
VHLGCSEEMLTIVSMLSVQNVFYRPKDKQALADQKKAKFHQTEGDHLTLLAVYNSWKNNK
FSNPWCYENFIQARSLRRAQDIRKQMLGIMDRHKLDVVSCGKATVRVQKAICSGFFRNAA
KKDPQEGYRTLIDQQVVYIHPSSALFNRQPEWVVYHELVLTTKEYMREVTTIDPRWLVEF
APAFFKVSDPTKLSKQKKQQRLEPLYNRYEEPNAWRISRAFRRR
NT seq
3555 nt
NT seq
+upstream
nt +downstream
nt
atggcggatcctacggaggagctcgcaacgctcgagtatctgtcgctcgtttccaaagtt
tgcactgagctcgacaaccacctgggcatcaacgacaaggatctagccgaatttgtgatc
aatcttgcagagagaaatacaaactttgatactttcaaaacagctctggtgaagaatggt
gctgagttcacagactccctcgtcagcaatctgctccgtcttatacagacaatgcggcct
cctgcaaaagcttccactagcaaagatattattaaaccaaaaacagaaaaagataagctg
aaggacttgtttccagccttgtgtcggccagataatcccatggtgaggacaatgctggat
gaagatgatgtaaaagtggctgctgatgctctccaagagctagaagctttaatgccatct
gcgagtaggcaggaaaaacaccggaataatgagaatcaagccaagaaaaagcataggagt
cgcagtcgtagcagagatcgaaagcggaaacgaaaatcatcctcccgctcccggacacgg
gaacgacataagggtaaatccagataccgctccaggagcagaagtcctagctgggaccac
aaagagagagagagagctggagagaaaagcagtgaaagatggagggataagcatgtggat
cgccctccacctgaagagccttccattggtgacatctacaacggcaaagttaccagcatc
atgcagtttgggtgttttgttcagcttgaaggactcaggaaacgctgggaaggattggtc
cacatctcagaattacgtagggaaggaagagttgctaatgtagctgatgtagtaagcaag
ggccaacgggtcaaggtcaaagtgctctccttcactggctcaaaaactagccttagcatg
aaagatgtagatcaagagacaggagaagatttgaacccaaatagacgtcgcaacctcatt
ggagagtctgaagagacagccatgagaaatccagacaggcccactcacttatctttagtc
agtgctcctgaagtagaagatgacacattagaacgaaaacgtctcactcgtatttcagat
ccagaaaaatgggaaattaagcagatgattgctgctaacgtgctttccaaggaggagttt
cctgactttgatgaagaaactggaatcttgccaaaggttgatgatgaggaagatgaggat
ttggaaattgaattggtagaagaggaaccaccatttctgcgaggtcatacaaagcagagc
atggacatgagccccattaaaattgtgaagaatcctgacggctccctgtctcaagcagcc
atgatgcaaagtgcacttgctaaagagaggcgggaactgaagcaagcccagcgggaagca
gaaatggattctattcccatggggctcaacaaacactgggtggatccccttccagatgtg
gatggaagacaaattgcagctaacatgcgaggtattggcatgatgcccaatgacatacct
gaatggaagaagcatgcttttggaggcaacaaggcttcttacggcaaaaagacgcaactg
tcaataattgaacagcgagaaagtctcccaatttttcgtctgaaagatcaactcatccaa
gcagtccatgataaccagattctaatcgtcattggtgagactggctctgggaaaactaca
cagatcacacagtaccttgctgaagctggctacaccacccgtgggaagattggttgcact
cagcctcgtcgagtagctgccatgtctgttgctaagagggtttcagaggaatttggttgt
tgtctaggacaagaggttggttatactatccgatttgaggattgcactagtcctgagact
gtgatcaaatacatgacagatggaatgctgcttcgtgaatgcctcattgatccggatctg
acacagtatgcaatcataatgttggatgaagcccatgaacgcactatacatactgatgta
ctctttggtctcctgaaaaagacagttcagaagagacaagacatgaaattaatagtgacc
tcagctacactggatgcagttaaattctctcagtatttctatgaggctcctatctttacc
attcctggtaggacatacccagtcgagattctgtacaccaaggaacctgagacggattac
ttagatgccagcctgataacagtcatgcagatccacttgacagaacctccaggagacatc
ttggtgttcttgactggccaggaagagattgatacagcttgtgaaattctctatgagcga
atgaagtccctcggcccagatgttcctgagctgataatcttgcctgtttattcagcactg
cctagtgagatgcagacccgaatctttgatccagctccaccgggaagtcgaaaggtggtc
attgccacaaatattgctgaaacttcacttacaattgatggtatctactatgtagttgat
cctggttttgtaaaacagaaagtgtacaactccaagacagggattgaccaactggttgtg
acaccaatttctcaggcccaagctaagcaaagagctggaagagctggaagaacaggccct
ggcaagtgctaccgactctacacagagagggcctaccgtgatgaaatgctgaccaccaat
gtacctgagattcagagaactaatctggccagcactgtgttatctctcaaggctatgggt
atcaatgatttgctatctttcgattttatggatgcccctccaatggagactctgatcact
gcaatggaacaactgtatactctgggagctttggatgatgaagggctgctcactcgactg
gggcgcaggatggcagagttcccactggagcctatgctttgcaagatgctcatcatgtcg
gtgcacctaggttgcagtgaggaaatgctcaccattgtctccatgctgtctgtgcagaat
gttttctatcgaccaaaggacaagcaagctcttgctgaccagaagaaagctaaattccat
caaactgaaggagatcacctcacacttttggctgtttacaactcctggaagaacaataag
ttctccaatccctggtgctatgaaaattttatccaagcccgctcactacgtcgtgcccag
gatattcgtaagcagatgctgggaataatggataggcacaagttagatgtggtatcctgt
ggaaaagcaacagtacgagtccagaaagccatttgcagtggtttctttcggaatgcagcc
aaaaaggacccccaggagggctaccggaccttgattgatcagcaagtggtctatatccat
ccctcaagtgccctcttcaatcgccagcctgaatgggtggtgtaccacgagcttgtgctc
acaaccaaggagtatatgagagaggttaccaccatagatccccgctggcttgtggagttt
gccccggcctttttcaaggtttctgatcccacaaagctaagcaagcagaagaagcagcag
cgcctggagccactttacaatcgctatgaagagcccaatgcctggaggatatcacgggca
ttcaggcgtcgatga
DBGET
integrated database retrieval system
