Notechis scutatus (mainland tiger snake): 113420173
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Entry
113420173 CDS
T09026
Symbol
SMARCD1
Name
(RefSeq) SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 1 isoform X1
KO
K11650
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D
Organism
nss
Notechis scutatus (mainland tiger snake)
Pathway
nss03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
nss00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
113420173 (SMARCD1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
nss03021
]
113420173 (SMARCD1)
03036 Chromosome and associated proteins [BR:
nss03036
]
113420173 (SMARCD1)
Transcription machinery [BR:
nss03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
113420173 (SMARCD1)
Chromosome and associated proteins [BR:
nss03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
113420173 (SMARCD1)
PBAF complex
113420173 (SMARCD1)
GBAF(ncBAF) complex
113420173 (SMARCD1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SWIB
DivIC
Motif
Other DBs
NCBI-GeneID:
113420173
NCBI-ProteinID:
XP_026535771
Ensembl:
ENSNSUG00000001398
UniProt:
A0A6J1UXR6
LinkDB
All DBs
Position
Unknown
AA seq
512 aa
AA seq
DB search
MAARAGFQAVPPSGGGSGAGPGAGPLGPGTPGPPVRMGPAPGQGMYRSPLPGAAYPRPGM
LPGSRMTPQGPAMGPPGYGGSPSVRPGMAQSGMDQSRKRPAPQQIQQVQQQSVQNRNHNA
KKKKMADKILPQRIRELVPESQAYMDLLAFERKLDQTIMRKRLDIQEALKRPIKQKRKLR
IFISNTFNPAKSDAEDGEGTVASWELRVEGRLLEDSALSKYDATKQKRKFSSFFKSLVIE
LDKDLYGPDNHLVEWHRTATTQETDGFQVKRPGDVNVRCTVLLMLDYQPPQFKLDPRLAR
LLGIHTQTRPVIIQALWQYIKTHKLQDPHEREYVICDKYLQQIFESQRMKFSEIPQRLHA
LLMPPEPIIINHVISVDPNDQKKTACYDIDVEVDDTLKTQMNSFLLSTASQQEIAALDNK
IHETIETINQLKTQREFMLSFARDPQGFINDWLQSQCRDLKAMTDVVGNPEEERRAEFYF
QPWAQEAVCRYFYSKVQQRRQELEQALGIRNT
NT seq
1539 nt
NT seq
+upstream
nt +downstream
nt
atggcggcgcgggcgggtttccaggctgtacctccgagcggtggaggcagtggagccggc
cctggggcgggaccgctaggaccagggacgccggggcctcccgtgcggatgggcccggct
cccggacaaggaatgtaccgctcccctctgcccggcgctgcatacccgcgccctggaatg
ttgcctggtagccgcatgactcctcaaggacctgcaatgggacctccaggctatggtggg
agcccttctgtccgacctgggatggctcagtcaggaatggaccagtctcgcaaaaggcca
gctcctcagcagattcagcaggttcagcaacagtcagtgcaaaaccgaaatcacaatgcc
aagaaaaaaaagatggcagacaaaattctacctcagcggatccgggaattagtacccgag
tctcaggcatacatggatttgttggcatttgagaggaagctggaccagactattatgcgg
aaacggttggatattcaggaggctttgaaaagaccaattaagcaaaaaagaaaactgcgc
atttttatctccaacacctttaatcccgccaagtcagatgcagaagatggagaaggcact
gtagcctcatgggaactccgagtggaaggacgactcttggaagattctgctctctccaag
tatgatgctaccaagcagaagagaaagttctcgtccttctttaaatctctggtgattgag
ctggacaaagacctctatggcccagataatcatttggtggagtggcataggactgctaca
acccaagagaccgatgggttccaggtgaaaaggcctggcgatgtgaatgtgcgctgcact
gtcctcctgatgttggactaccagcctccacagttcaaactagacccacgtttggctcgt
ctcttgggaatccacacccagacccgcccagtaatcatccaagctctgtggcaatacatc
aagactcacaagctgcaggacccccatgagcgggagtatgtcatctgtgataagtacctc
cagcagatattcgagtctcagcgaatgaagttctcagagatcccacagcggcttcatgca
ttgcttatgcctccagagccaattatcattaaccatgtcatcagtgttgatccaaatgat
cagaagaaaactgcttgctatgacattgatgtagaagtagatgatactttgaaaacccaa
atgaattctttcctgctttctacggccagccagcaggagatagctgcactggataacaag
atccatgagaccatagaaacaattaaccagttaaagacccagcgtgaatttatgctgagc
tttgccagagatccccagggtttcatcaatgactggctgcagtcccagtgtcgagacctg
aaggctatgacggatgtcgttgggaacccagaagaagagcgccgagctgaattttacttc
cagccgtgggcccaagaggctgtatgcagatatttctactctaaggttcagcagagaagg
caagaactcgaacaagctctgggaatccgcaatacctaa
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integrated database retrieval system
