Notechis scutatus (mainland tiger snake): 113420394
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Entry
113420394 CDS
T09026
Symbol
FREM1
Name
(RefSeq) FRAS1-related extracellular matrix protein 1
KO
K23380
FRAS1-related extracelluar matrix protein 1/2
Organism
nss
Notechis scutatus (mainland tiger snake)
Pathway
nss04512
ECM-receptor interaction
nss04518
Integrin signaling
Brite
KEGG Orthology (KO) [BR:
nss00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
113420394 (FREM1)
04518 Integrin signaling
113420394 (FREM1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04091 Lectins [BR:
nss04091
]
113420394 (FREM1)
Lectins [BR:
nss04091
]
C-Type lectins
Lecticans
113420394 (FREM1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Cadherin_3
Frem_N
Cadherin_4
EAV_GS
Motif
Other DBs
NCBI-GeneID:
113420394
NCBI-ProteinID:
XP_026536069
Ensembl:
ENSNSUG00000011384
UniProt:
A0A6J1V8D3
LinkDB
All DBs
Position
Unknown
AA seq
1464 aa
AA seq
DB search
MGNIWVLLLFALNLKTACSTFVSINQGLKVMRGQSVFLSQKELEFSIPREKDACKIKVVM
NEPVAQRVGKLTPQVFDCHFLPNEVKYTHNGCPILDEDFVMLRLYRFTEMETFTETLILL
VKILEPDCNIIKMSSSALEVPEFHGLSNIVNKNIITLDYNRKINLECTISLNSLETFLPA
HGQLVIGENKEEVPRGDQPQSSFHTTNLRTVQNIRVSCDEFLLMGLRYQHLDPPSPNIDY
IPIRLDLTDTRSKILYKSEYAWIPVQIKNAVSNQPPQPSFMAMLILEADQFILSPLSTAI
LDAEDSETPKSLLVFNITQPPQEGFITHLQDHTKAVSSFTWTSLDSMLIAYQPPNSSHTE
RRNYEVEFEVYDLYFEKSVPITLYISVRTADTNAPRVSWNMGLDLLEGQSRPITWEQLQI
VDNDDISSVRLVPVDGLQHGQLTVRGEKGFVFNVLDLKTGVVRYHHDDSDSTKDSIVFRI
FDGHHSSRHRFPINILPKDDSPPFLISNVEIEVHEGETILIQSSMLRASDMDSSDDYILF
NITGSPQAGEIMKKPKTDFIGYPVTKFLQKDLFNGIIYYHHLGGEIFEDSVELILCDSHD
PPNLSEIQIIRVHIIPVNDQLPKEFPGTNRHLTVKETEIAYLTKTHLHYIDMETQDSELI
YTITSPPFFSLAHDHTDAGKLFMVESIPKLIKDPSIPSLRSFTQHAINHMKVAYVPPMED
IGPEPQYIQFAFSISNQHGATVYGNCFNITVLPVDNQSPEVLTHSLKVEEGGQSTITKGH
ILISDADTKLENIRIYLLTLPLHGTVELNENPMNQRDWLTCEDLQMSKVRYHHNGSEFPQ
DHILFEATDGINSFEFTLHVKVIPVNDEPPVMNADLIPFVWCPEGQAVPITSEHLYATDK
DSEDMQLMFMVARPSKYGVVKRGGLVIDRFLQADVVSGTVTYEHTSGEIGLALIFDVLTF
IVLDDEIDPDVKACCDDKSPFFSVPYHKSFPVYDINITIFPVDNQPPSIATGLVFAVLEG
ASAAITSKHLYATDLDTNADDLQFVLTSPPQFGYIENILPSPGFEKSNEGISIASFHMEN
VRKMQINYVQTRHRRIEPTTDQFMLYVTDGKHRSVEAPFYVFINSTNDEEPEFMARNFTV
QEGQMKELDPSIINAVDLDVPEDILTFTVLQQPHHGFLVKGAYGNNIFHYRQAIISQQYH
EIQVDSISMEILKNGLKLVYLHDDSDSLADDFSIQLSDGKHQVSKTISVKVTPVNDEKPV
LSRKGKIEVNMGEAQIISSAILSAEDKDTPREQIYYLFERVPENGHLQLKVGQDWVALYK
GMKCTQENIDMNAVRYIHTGTLGSNNEDSFSFHLWDGNNRSPEVVFPIAIKDVEKGNIAM
LMRPLTVLIGDKGLLMTDVLLAVDGTKKPEELHYVITSPPQYGQIEYVGYPGIPITSFSQ
MDVAGQKVCYVHSNRASSSKDTFR
NT seq
4395 nt
NT seq
+upstream
nt +downstream
nt
atgggaaacatttgggttctgttgctttttgccctgaatctgaaaaccgcctgctccacc
tttgtcagcatcaaccagggactaaaagtgatgagaggtcaatctgtcttcctgtcacaa
aaggagttggagttttccatccccagagagaaggacgcatgtaaaataaaagtggtgatg
aatgagccagtcgcccagagagttgggaagctgaccccacaggtgtttgactgccatttt
cttcccaatgaagtcaagtacactcacaacggatgcccaattctcgatgaggactttgtc
atgctgaggctatatagatttacagaaatggaaactttcacagaaacactcattcttctt
gtaaagatacttgaaccagattgtaatattatcaagatgagctccagtgctttggaggtc
cctgagtttcacggcctgtctaacatagttaataagaacataatcactttggactacaac
aggaagataaatttggaatgcacgataagcttgaactccttagagacatttctgcccgcc
cacggtcagcttgttatcggagaaaacaaagaagaagtacctagaggagatcagccacag
agttccttccatacaactaacctgaggactgttcagaatatcagagtgagctgtgatgag
tttcttctgatgggacttagataccaacatttggaccctccttcacctaatatagattac
attcccatcaggctggatctcactgataccagaagcaagattttgtataagtctgagtat
gcttggattcctgttcagataaaaaatgcagtttctaaccagccccctcaacccagcttc
atggccatgctcatcttagaagcagaccaattcatcctgagtcccctatccacagccata
ttggatgctgaagacagtgaaacacccaaatctttgttagtctttaatatcacccagcca
ccccaggaaggcttcattacacacctgcaagaccacactaaagctgtctcgtccttcacc
tggaccagcctggatagcatgctgattgcatatcaacctccaaacagcagccatacagag
agaagaaattatgaggtggaatttgaagtttatgatttgtactttgaaaaaagtgtgcca
attactctttatatctctgtgagaacagcagacacaaatgcaccaagggtttcatggaac
atgggtcttgatcttctggaaggtcagtctcgcccaataacatgggagcagcttcaaatt
gtagacaatgatgatatcagcagcgttcgcttggtccctgtggatgggttacaacatggg
cagctcactgtaagaggagagaaaggattcgtgtttaatgtcttggatctgaagactgga
gttgttcgttaccatcatgatgacagcgattccaccaaagactccattgtttttaggatc
tttgatggccaccacagtagccgccacaggtttccaatcaatattctgcccaaagatgac
agccccccttttctcattagtaatgttgaaatagaagtccatgaaggagaaacgatcttg
atccaaagctcaatgcttcgagcatcggatatggactctagcgatgactacattctcttc
aatatcaccggatcaccccaagcaggagaaataatgaaaaaacctaaaacagattttatt
ggttatccagttactaaattccttcagaaagatctgtttaatgggataatttactaccat
cacttaggaggagaaatatttgaagattcagtagagctgattctgtgtgatagccatgat
cctcccaatctttcagaaattcagataataagagtgcacataattcctgtgaatgatcag
ctgccaaaagaatttccaggaacaaaccgtcatctgactgttaaggaaacagagattgct
tatttaacaaagacacaccttcattatatagacatggagacccaggatagtgagctaata
tacaccataacatctcccccattcttctccttagcacatgaccacacagatgctggaaaa
ttgttcatggtagagagtattcctaagcttatcaaggatccttctattccatcactaaga
tcattcactcagcacgccataaaccacatgaaagttgcctatgtgccacccatggaagat
attggtcctgaaccccaatatatccagtttgccttttccatcagcaatcaacatggggca
actgtgtatggcaactgtttcaacattactgtccttccagtggacaatcagtctccagag
gtgcttacacacagcttgaaagtggaagaagggggccagagcaccattaccaaaggccat
attttgatttcagatgcggacaccaaactggaaaacatacgtatatatctccttacgctt
cctcttcatggaactgttgaattaaatgagaatccaatgaatcagagagattggctgacg
tgtgaagatttacagatgtccaaagtcaggtaccatcataatggttcagagtttccacag
gaccatattctttttgaggctacagatggcatcaattcctttgaattcaccctccatgta
aaggtaattcctgtaaatgatgagcccccggtgatgaatgctgacctcattcccttcgtg
tggtgtccagaaggacaggcggtgcccatcacttcagagcatctctatgcaactgataaa
gatagtgaagacatgcagctgatgttcatggttgcgcgaccctctaagtatggggttgtg
aagagaggtggacttgtgatagatcgctttctccaagctgatgttgtttctggaacggtg
acatacgaacatacaagtggcgagattggcctagctcttatctttgatgttcttaccttt
attgtgttggatgatgaaattgatcctgatgtaaaggcctgctgtgacgataaatctcca
tttttttctgtaccatatcataaatcctttccagtatatgatattaatatcacaatattt
ccagttgacaaccagccaccatccattgccaccggacttgtgtttgctgtgctggaaggt
gcctcagcagctatcacaagtaaacacttgtatgccactgatcttgacaccaatgcagat
gacttacagtttgttttaacatcccctccccagtttgggtacatagaaaatattttgcca
tcgcctggttttgagaaaagcaatgaagggattagtatagcttcatttcacatggaaaat
gtgaggaagatgcagattaactatgttcagaccaggcacaggagaattgaaccaactaca
gaccaatttatgctgtacgtcactgatgggaagcatcgttcagtggaggcaccattttat
gtcttcattaactcaaccaatgatgaagaaccagaattcatggcaaggaattttacagtg
caagagggacagatgaaggagttggatccatcaataatcaacgctgttgatttggatgta
ccagaagatatcctcacgtttactgtccttcaacaaccccaccatgggtttcttgttaag
ggagcatatggcaacaatatttttcattacaggcaggcaattattagtcaacagtatcat
gaaattcaggtggatagtatatccatggagattttaaaaaatggattgaagcttgtgtat
ctacacgatgactctgacagcttagctgatgacttttcaatccagctgtcggatgggaaa
catcaagtgtcaaaaaccatttcagttaaggttaccccagttaatgatgagaagccagtg
ctgagcagaaagggtaagatagaggtgaatatgggggaagcacagataatatctagtgct
attttatcagctgaagataaagatactcctcgggaacaaatttattatctgtttgagaga
gttccagaaaatggacatcttcagctcaaggtaggtcaagattgggtggcactgtacaaa
ggaatgaagtgcacccaggagaatatagacatgaacgctgtgaggtatatacacactgga
actcttggatcaaacaatgaagacagcttctcctttcacctttgggatggaaacaacaga
tctccagaagtggtttttcccattgctattaaagatgtggaaaagggaaacattgcaatg
ttgatgagacccctcaccgtgttgataggtgacaaaggtctcctgatgactgatgtcctc
cttgcagttgatggtaccaagaagccagaggagctacactatgtgattacttccccacca
cagtatggacagatagaatatgtcggctatcctggaatccccattacgagtttcagccaa
atggatgtagcagggcagaaagtctgctatgtccacagtaatagagcatcttcctctaaa
gatacattcaggtaa
DBGET
integrated database retrieval system
