Notechis scutatus (mainland tiger snake): 113420417
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Entry
113420417 CDS
T09026
Symbol
SCAF8
Name
(RefSeq) protein SCAF8 isoform X1
KO
K13191
RNA-binding protein 16
Organism
nss
Notechis scutatus (mainland tiger snake)
Brite
KEGG Orthology (KO) [BR:
nss00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
nss03021
]
113420417 (SCAF8)
03041 Spliceosome [BR:
nss03041
]
113420417 (SCAF8)
Transcription machinery [BR:
nss03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
113420417 (SCAF8)
Spliceosome [BR:
nss03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
113420417 (SCAF8)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CID
RRM_1
Transformer
RRM_occluded
Motif
Other DBs
NCBI-GeneID:
113420417
NCBI-ProteinID:
XP_026536102
Ensembl:
ENSNSUG00000011721
UniProt:
A0A6J1V633
LinkDB
All DBs
Position
Unknown
AA seq
1350 aa
AA seq
DB search
MKEADRRHPSGEQPPFRRGSKAFFPPPHNMEAVKAFNSELYSLNDYKPPISKAKMTQITK
AAIKAIKFYKHVVQSVEKFIQKCKPEYKVPGLYVIDSIVRQSRHQFGQEKDVFAPRFSNN
IISTFQNLYRCPGDDKSKIVRVLNLWQKNNVFKSEIIQPLLDMAAGIPPPVVTPVLPGTT
ATLSNNTPGTPVTPATPANVIQSLPDPWVSQITNTDTLAAVAQILQSPQGQQLQQLIQTL
QMQQQKPQPSLLQALDAGLVVQLQALTAQLTAAAAAANTLNPLEQSVSFNKKLIDRFGDF
GEEADLNEEPKKETPTSQLPLVSESVNNSLFHQLAEHLQQQNFEHLRQQLLDQQPSKVSP
EETQEENFGSEHSASPSQDSSHQQFLEVETKLDNSMDVQQQDMDIDEAQEVIEQEVFEQE
EKKPAVLSRSRTRSRSRSRSPRKRRSRSRSGSRKRKHRKRSRSRSRERKRKSSRSYSSER
RAREREKERQKKGLPPIRSKTLSVCSTTLWVGQVDKKATQQDLTNLFEEFGQIESINMIP
PRGCAYVCMVHRQDAYRALQKLSSGSYKMGSKIIKIAWALNKGVKTEYKQFWDVDLGVSY
IPWEKVKVDDLDGFAEGGMIDQETVNSEWETTRTSETVKESVQVTQSATIDKTTVVTTQA
ETYTQSVSMLQMPVAPTVPAVNLVPPAFPVTMSVPPPGYSGIPPPPFLRASFNPSQPPPG
FMPPPVPPPVPPPVVPTSLVQQSMTLAQESMKDFSSLVLPGGSVSSSLTTPTLSAGSVFP
SLSKNSSELDEKGSLRADLQISSTENRTVQDDVSSSSGLTEGVQPPGITTSSGHVGGTQP
PHVSSSAGLVQPVSVSSSSGLLTRVQPPTASNSSNLITGVQAPSVSSSSGLLTGLQPINV
SSSSSLLMGIQPPIVSNNTGRLSGIQPPIVSSNSGLLTALQPPIVSSNSAILGLPPPMVS
SSSGLLGLPPPNISGGSGLLGLQPPTGIQNLSHLTMSSQRLPGIPLVEIRSGLIPQPPGP
RFPLLQPGIPPQRTVPPPAILDPSLPPPRVPFLPGDIFTQTERPFATSSRQNMDISNPDK
RLPVGEDSIQQEGDRDYRFPPLESRDRASSVDIRDSIGRPPLDPREGLGRPPVDGREHLI
RPHIDLRENFGRPGIDNLRREHFAFNSEKHWGQRGDYDEREHQTFPVYGGLRGFQEARER
YRQTNYRFETRSGPTWNRGLEQDAHRDFDDRRRPWERQRDRDDRDFNFGREINGNRFGRE
RTQNNWIPPPHPRVFEYFEGGPSQQKVDSVPQVNGENTETENQPSAVQVQEELELYEKLA
TSNETKKEKSDTEAELENEPVVESTETEGT
NT seq
4053 nt
NT seq
+upstream
nt +downstream
nt
atgaaagaagccgaccgccgtcaccccagcggagaacaacctccctttcggcgcggttct
aaagcctttttccctccgccgcacaacatggaggccgtgaaagcttttaacagcgagctt
tactcgctgaatgattacaaacctcctatttcaaaggctaaaatgacacagattactaag
gcagcaatcaaggccataaagttctacaaacatgttgtacagagtgttgagaagttcatt
caaaagtgtaaaccagaatacaaggtgcctggtttatatgtcattgactcgattgtacga
cagtctcggcatcagtttggacaagaaaaggatgtctttgctcctcggtttagcaataac
atcattagcactttccagaatttatatcgttgccctggggatgataagagtaaaattgtt
agagtgctcaatttgtggcagaagaataatgtgttcaaaagtgaaattatccagcctcta
ttggatatggcagcaggaattcctcctccagttgtgactcctgttttgccagggacaact
gctactttgagtaataatacaccaggaactccagtaactcccgctactccagccaatgta
atccaaagtttacctgatccatgggtatctcagataactaatacagatacgcttgctgct
gtagcacagatcctgcagagtccacaaggtcaacagcttcagcagttaatacagacattg
cagatgcaacaacagaaaccacaaccatcattgcttcaagcactggatgctggtctcgtt
gttcagctacaggctctcactgctcaacttacggctgctgccgccgctgccaatacactc
aatccactagaacagagtgtctcttttaacaagaagctgatagataggtttggagatttc
ggagaagaagctgatttgaatgaagagcccaaaaaggaaactccaacttctcaattgcct
cttgtatctgaatccgtgaacaactcactttttcatcagttagctgaacatctacagcaa
caaaactttgaacatcttcggcagcagcttctagatcagcagccatcaaaggtaagccct
gaggaaactcaagaagaaaattttggttctgagcattcagcatcaccttcacaagacagc
agtcaccaacagtttttagaagtggaaacaaagcttgacaattcaatggatgttcaacaa
caggacatggatatagatgaagcccaggaggttatagaacaagaagtctttgaacaagaa
gaaaagaaaccagctgttctttcaagatcacgaacacgctcaagatcacgttcaaggtca
ccaagaaaaagaaggtcaagatcacggtctggttctcgaaagcgtaaacacagaaagcgc
tcacgttctagatcaagagaaagaaagaggaagtcatcaaggtcatactcaagtgaaaga
agagctagagaaagggaaaaagaaagacagaaaaaagggttacctcctatccgatcaaaa
acactaagtgtctgcagtaccacgctttgggttggtcaagtggacaagaaagccacacag
caagatttaaccaatttatttgaagaatttggacaaatagaatctataaatatgatccct
cctagaggttgtgcatatgtctgcatggttcataggcaagatgcctaccgtgctcttcag
aaattaagctctggatcctacaaaatgggatctaaaattattaagattgcatgggcttta
aacaaaggggtgaaaactgaatacaaacagttttgggatgtggatcttggagtatcatat
ataccctgggaaaaagttaaggtggatgatttagatggctttgcagaaggaggcatgatt
gaccaggaaacagtaaatagtgaatgggaaactacaaggacttcagagaccgtaaaagag
agtgtgcaggtaacccagagtgcaaccattgacaaaaccacagttgtcacaacacaggca
gaaacttacacacagtctgtcagtatgctacagatgcctgtagctccaactgtgccggct
gttaatttagttccacctgcatttcctgttacaatgtctgtccctccacctggttacagt
ggaattcctccgcctccattcttgagagcaagctttaatccttcacaaccacctcctggt
ttcatgcctccacctgttccgccacctgttccgccaccagtagttccaacatctcttgta
cagcagtcaatgacccttgctcaagaatcaatgaaagattttagcagccttgttctacca
ggtggtagtgtttctagtagtcttacaacaccaacattatctgccggaagtgtctttcct
tctctttcaaagaacagttcagaattagatgaaaaaggatctcttcgtgctgatcttcag
atctcttctactgaaaacagaactgttcaggatgacgtttcaagcagttctggacttacc
gagggagtacagccacctggtatcacaaccagttctgggcatgtagggggaacccagcca
ccccatgtctcaagtagtgctggacttgtgcagccagtcagtgtctcaagcagctctgga
cttttgacaagagttcaaccacccactgcttcaaatagctccaatcttataacaggtgtt
caggctccaagtgtttcaagtagctctgggcttttgacaggacttcagcccataaatgtt
tcaagcagctccagccttttaatgggaatccaaccacccatagtctcaaataatactgga
cgtttgtcaggaatccagccacccattgtatcaagtaattctgggcttttgacagcactc
caaccacccattgtatcaagcaattctgcaattttaggattgccaccaccaatggtttca
agtagttctggactattaggattaccgccaccaaatatttcaggtggttctggactatta
ggactacaaccacccactggaattcaaaatttatcccatttaactatgtctagtcaacgg
ttgcctggaattcctctagtagaaatccgatcgggattaataccacaaccacctggtcct
aggtttccactactgcaacctgggataccaccacaacgtacagttcctcctccagctata
cttgatccatcccttcctccacctagagttcctttccttccaggagatatttttactcaa
acagagagaccatttgcaacttctagtaggcaaaatatggatatttctaacccagataaa
agattgcctgtcggggaagatagcattcaacaagaaggagatagagactatcgcttccct
ccattggaaagtagagatcgagcatcttcagtagatataagggattctattggaaggcca
ccactagatccaagagaaggtctaggccgacctcctgtagacggaagagaacatcttatc
aggccacatatagatttacgggagaactttggacggccaggtatcgataatctaaggaga
gagcattttgctttcaactcagaaaaacactggggtcaaagaggagattatgatgaaaga
gaacaccagacctttcctgtatatggtggtctaagggggttccaggaagctcgagagaga
tatcggcaaacaaattacagatttgaaactcgaagtggtcctacctggaacagaggactt
gaacaagatgctcacagagactttgatgaccgtcgtaggccatgggaaagacaaagggac
agggatgatagagattttaattttggtagagaaattaatggaaacagatttgggagagag
agaacacagaacaactggataccccctccacatccaagagtgtttgaatattttgaaggt
ggtccttctcaacaaaaagttgatagtgtaccccaagttaatggtgaaaacacagagaca
gagaatcagccatctgctgtgcaagtgcaggaggaattggaactttatgaaaaattggcg
acttcaaatgagacaaaaaaagagaagagtgacacagaagctgaattagaaaatgaacca
gtggtagaaagcacagaaactgaggggacataa
DBGET
integrated database retrieval system
