Notechis scutatus (mainland tiger snake): 113421378
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Entry
113421378 CDS
T09026
Symbol
COL6A6
Name
(RefSeq) LOW QUALITY PROTEIN: collagen alpha-6(VI) chain
KO
K06238
collagen type VI alpha
Organism
nss
Notechis scutatus (mainland tiger snake)
Pathway
nss04510
Focal adhesion
nss04512
ECM-receptor interaction
nss04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
nss00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
113421378 (COL6A6)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
113421378 (COL6A6)
09142 Cell motility
04820 Cytoskeleton in muscle cells
113421378 (COL6A6)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
nss04147
]
113421378 (COL6A6)
00536 Glycosaminoglycan binding proteins [BR:
nss00536
]
113421378 (COL6A6)
Exosome [BR:
nss04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
113421378 (COL6A6)
Glycosaminoglycan binding proteins [BR:
nss00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
113421378 (COL6A6)
Hyaluronan
Extracellular matrix or blood plasma proteins
113421378 (COL6A6)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
VWA
VWA_2
VWA_3
DUF1194
zf-CCHC
Zap1_zf2
Motif
Other DBs
NCBI-GeneID:
113421378
NCBI-ProteinID:
XP_026537513
UniProt:
A0A6J1V9Z3
LinkDB
All DBs
Position
Unknown
AA seq
1938 aa
AA seq
DB search
IYSLINYHNLKMFLTLLLVILGTQASKTQQPASESVDVVLLIDSSNTFGRQGFLSLKNYV
NRMINNLPIGPNKYRLALIQYSDDIHVEFQLDDFKGKNPMLNHVKKRFSFQGGSLRTGNA
IQKIHKTIFKALRRDRHQVLIITTSGVSQDDVEGPATLMREDGVKIIALGMLNASEQELK
SMATHPFSYHFDTLKDLQKFSSNILSVIESTIAIDENLVFSTATPPSTIYAHSMPIKVVD
CSDDLIADVVFVVDEAVSPTNSEYIVSFLQNITTSLDVQKSCIRIGLVTYSNEPRVLSQL
NTETEIKDLIFKIKSFSPREGKAKLGAALNFTREIFFTESAGSRRTEGVEQIATLIAHRP
SEDSVTEASSLLLQKGVTVFAISSEGANITQLGGVVSYPPNRNIIKVDHFSNLADKSKIF
EKKLFKHIHMFFDEAERTEEFRSGCMETEKADIYFLIDGSSSISPSNFIKMKTFLKEVIK
LFTIGPDHVRFGVVQFGTLYQTEFELDKYMKISHLEKAINNIIQMGVDTYTGAAIWSMQP
LFEKAKKQXGGKVPCYLIVLTDGKAHDNVLEPSKMLRKSAVNIYAIGVKSANITQLNEIA
DSESKVYYVEQFDSLKNIKNEIVRDICSEKACEKMKADVMFLVDSSGSISHQDFEKMKKF
MQELVDKCSVGLNEVQFGVVQFSSTNKEEFQLNSSKDYIINAIGNMTQMXQNTYTGKALQ
FVSDYFKPAKRARPSVNKILILLTDGEAHDNVREPSSALRKEGVIIYSIGITGANVTQLV
EISGAPNNMFYLKDYDVLKYIEKDIMFRICSPYKLDECKRINRLDLVFVIDSSSSIGETN
YILMNNFIIGIVNKSDVGKDHVQFGAVKYSNNPEIMFKLNTYSKRSDIIKFIQDNVLLKG
DTYTAKALQLSESLLTKENGSRIDQGVPQVLMVITDGESHDRAILDSTSNELRKKGTIIY
AIGIKDANREELEIMAGSKDYWFYMPSFEGLENITTNLISCFFYWIPFAECDIEAELVIL
ADSRSIPDKELKAVKDFVIKLLKSIINKDNILVGMAQFSNTLQEVFQLGAYQDLPELYSK
ITNMSLITGGSTLIGHALRKVKTFFKTSKERVARSVNQKLLIFTDGRSDDEFPQAAKKLR
DEGVEIHAVAVGNVTDSKLLQITNSPSRKYKVDHYSDLKTLVNHVNKEICKETTEATCFV
DIIIGFDMSSQKPGNNLFSEQHHLEIYLPDIIKGLTSLSSTSCSKDKKAQFSVTISVENT
DKPFWAKFHYVDDTNIVTELRNVVVNRPSHLNTDFLDALWNLVKNVTDIENRNTVLLLFS
DGLDDNIIALGQKSEELRIQEILMENHALLYGALESVMTGTPGLVGDDGELGTWGYPGHL
IHKWYQMAVAMDLKLNWYKKCRTMAQKTKAQSEKCQLGRQSNSGQVAESPSKASGPPIKC
FHCGQQGHQVAECLEPASQPKGKPPEPTKAKKPQQKGPKGAKGQSFYSPCELIEYVQKHS
SCWTGIPKCPAYPTELVFALDISQDTNPKIFEEMRKTVIDIVNQTNIRESNCPVGARVAV
VSYSSNTNYLIRFTDFQNKNKLLQELNRLYLQRTTNRRDIGGSMRFVARHLFKRTLQGAN
VRKVAVFFSNGESEHPDSIGTAVLEFSALGIQPAVISFKSIPEITQAFEMDSTGLFQVIH
LHQKSDYLSVLERLQVCVICYDKCRPDESCFRTQPFKTEAYMDAAFILENSRKISTTGFE
ELKHFLSRVLDSFEISTDPKTSLIGDRIAVVSHAPLNFQFQRQELPVKIEFDLVTYESKK
QMKRHIEKSFQKLNGEAALGHAIKWTIDNIFSEGLNQREKKAIFIISVGETSPWDKEVLS
DAALRAKCKGYAVFVLSIGPQYDYIELMELSSLPLEHHIVQLGRIHKAELEYAVKFLKPL
IHLLKTLHLTRLHQIKFI
NT seq
5817 nt
NT seq
+upstream
nt +downstream
nt
atttattcattgatcaactatcacaatctgaaaatgtttctgactttgctccttgttata
cttgggacccaggcttctaaaacacagcaacctgcctctgagtctgtagatgttgtcctt
ctgattgacagctctaataccttcggcagacaaggttttctctcattaaaaaattatgtg
aatagaatgatcaacaatcttccaatagggccaaataaatatcgccttgcacttatccaa
tacagtgatgatatccatgttgaattccagctggatgacttcaaaggaaaaaaccctatg
ctgaaccatgttaaaaagagattttcattccagggtgggtctttaaggactgggaatgcc
atacaaaagatccacaagactattttcaaggcactaagaagagacagacaccaggttttg
attattaccacttcaggggtatcacaagatgacgtggaaggacctgctacattaatgaga
gaagatggggtaaaaataattgctttaggaatgctgaatgcatctgagcaagagctgaag
tcaatggccacacatccattcagttaccattttgatacactaaaagatctccaaaagttt
tcctcaaatatattgtctgttattgaatcaactatagcaatagatgagaatttagtcttc
tccacagctaccccaccaagtacaatttatgctcatagcatgcccataaaagttgtggat
tgttctgatgatttaattgcagatgttgtatttgtggtggatgaagctgtttcacctaca
aatagtgaatatattgtatctttcttacaaaacataacaacctctcttgatgtgcagaaa
agctgcatcagaattggtcttgtgacatacagcaatgagcctcgtgtactttctcaactg
aacacagaaacagagataaaagatcttatatttaaaatcaagagcttttctcccagggaa
ggaaaagctaaattaggtgctgccttaaactttactagagaaatattttttactgaaagt
gctggaagcagaaggacagaaggtgtggaacaaatagctaccctcatcgcccacagaccc
tctgaggatagtgtaactgaagcatcaagtctccttttgcagaagggtgtgacagtattt
gccataagcagtgaaggggctaatatcacacagttaggtggagtagtatcctatccccca
aatagaaatattataaaagttgaccatttttcaaatctggcagataagtctaaaattttt
gagaagaaactattcaaacatattcatatgttttttgacgaagctgaaagaacagaagag
ttccgatcaggatgtatggaaacagaaaaggctgatatttattttctcattgatggttca
tcaagcatcagtccctcaaattttattaagatgaagacattcctaaaggaagtaattaag
ctatttaccataggacctgatcatgttcgatttggagttgttcagtttggaactctttat
caaacagaatttgaacttgataagtatatgaaaatcagccatttagaaaaagccattaat
aatataatccaaatgggagtagacacatatactggagctgctatatggtctatgcagcca
ttatttgaaaaggcaaaaaaacagtgaggtggcaaagtcccttgttatctcattgtactg
acagatggaaaagcacatgataatgtgctggaaccttctaaaatgctaagaaaatcagca
gtcaatatttatgctattggtgtgaaatctgctaatatcacacagttaaatgagattgca
gactcagaatcaaaggtttactatgtggaacagtttgactccttgaaaaatataaaaaat
gaaattgttcgagacatatgctctgaaaaagcctgtgagaaaatgaaagctgatgtcatg
ttcttagtagacagctctggaagtataagccatcaagattttgagaagatgaagaagttc
atgcaagaattggtagataagtgtagtgttggtctaaatgaagtgcaattcggtgttgta
cagttcagtagcaccaataaagaagagttccaactcaactcatcaaaagattacattatt
aacgctattgggaacatgactcaaatgtaacagaacacttatactggaaaagctctgcaa
tttgtttctgattatttcaaaccagcaaaaagagcacggccttctgtcaacaaaattctt
atcctcctcacagatggggaagcacatgataatgtaagagaaccatccagtgctctaaga
aaagaaggtgtcattatctattccattgggattactggtgctaatgttacacaactagta
gagatcagcggggcaccaaacaacatgttttacttgaaagattatgatgttctgaaatac
atagagaaagacatcatgtttcgcatatgcagtccatataagctggatgagtgcaaaagg
ataaaccgtttagatctggtttttgtaattgatagttctagcagtattggtgaaaccaac
tacattctcatgaataacttcataattggcattgtaaataagtctgatgtaggtaaagac
catgttcagtttggagcagtaaagtattccaataatccagaaattatgttcaagctgaat
acctatagcaaaagatcagatatcattaaatttattcaggacaacgtgcttttaaaagga
gatacatacacagcaaaggctcttcagctctcagaaagtcttttaactaaagaaaatggc
agccgcatagaccaaggggtccctcaagttcttatggtcataactgatggagaatctcat
gatagggcaatactggatagcacttcaaatgaactcagaaagaaaggaactattatttat
gccattggaataaaagacgcaaatcgtgaggaacttgaaatcatggctggatcaaaagac
tactggttctacatgccatcatttgagggactggaaaacataaccacaaaccttatatca
tgttttttttattggattccttttgcagaatgtgatattgaagcagaacttgttatccta
gctgattccagaagtatccctgacaaagaactgaaggctgtgaaggattttgtgataaaa
ttgcttaagtcaattataaataaagacaatattctagttggaatggcccaattcagtaat
acacttcaagaagtattccagctgggtgcttatcaagatctaccagaactgtatagtaaa
attactaatatgtcactgatcacaggagggtccacattgattggacatgccctcagaaaa
gtcaaaacctttttcaaaaccagcaaagaaagagtagctcgaagtgttaaccaaaagttg
ctcatattcactgatggaagatcagatgatgagtttcctcaagcagcaaaaaaattgaga
gatgaaggtgtggaaatccatgcagttgcagtaggaaatgtgactgattcaaaacttctg
cagattaccaactccccaagcagaaaatataaggttgaccattacagtgatctaaaaact
cttgttaatcatgtaaataaggaaatttgtaaagagactactgaagcaacatgttttgta
gatattattattggatttgatatgtcatctcagaagccaggaaacaatttattcagtgag
caacatcatttggagatttatcttcctgatattataaaaggcctaacatctttaagcagc
acaagttgctctaaggataaaaaagcacaattcagtgtgactatttcagtagaaaacaca
gataaacctttctgggcaaaatttcattatgttgatgacacaaatatagtaacagaactc
agaaacgttgtggtcaacagaccatctcatctcaacactgacttcttggatgctctttgg
aatttagttaaaaatgtgactgacatagaaaatcgaaacacggtattacttcttttctca
gatggcttggatgataatataatagcacttggacaaaaatctgaagaacttagaatacaa
gaaatcctcatggagaatcatgcattgctttatggtgctttggaatctgtaatgacaggt
actccaggattagttggtgatgatggtgaactaggaacatggggttaccctggacacctg
atccacaaatggtatcagatggcagtggcaatggatctcaaactcaattggtacaagaag
tgcagaaccatggcgcaaaagacaaaggcccagtcagagaagtgccagcttgggagacaa
tcaaattccggccaagtcgcagagtcccctagcaaagcctcgggaccacccatcaagtgc
ttccattgtggccagcaaggccatcaggtggccgaatgtctagaaccagcttcccagcca
aaggggaagccaccggagcccaccaaggcaaagaagccccaacaaaagggtccaaaagga
gcaaagggccagtccttctattctccttgtgaacttattgaatatgtacagaaacatagc
tcctgctggacaggaataccaaaatgtccagcatatccaacagaattagtatttgctttg
gatatatctcaagataccaatcctaagatatttgaagaaatgagaaagactgtcattgat
attgtgaaccaaacaaacatcagagagagcaattgtcctgtgggagccagagtggctgtt
gtgtcctacagctccaacaccaactatctgatccgctttacagatttccagaacaagaac
aagttgttacaggagctcaatagactttatttgcagagaacaaccaacagacgggacatt
ggtggatccatgaggtttgttgccaggcatctcttcaagcgaactctccaaggtgctaat
gtgaggaaagttgctgtcttcttcagcaatggagagtctgaacatcctgactcgattggt
acagcggtcctagagttcagtgccttaggtatccagccagcagtcatttcttttaaaagc
atccctgaaattacccaagcttttgagatggacagcacaggattgtttcaagttatccac
ctccatcagaagagtgattatctttcagtcttagaaagacttcaggtgtgcgtaatttgc
tatgacaaatgcagaccagatgaatcttgcttcagaacgcaacctttcaaaactgaggct
tatatggatgctgcattcattctggaaaattccaggaaaataagcactactggatttgaa
gaactaaaacatttcctaagtagagtattggacagctttgaaatttctacagatccaaag
acctctttgataggtgatcggatagctgttgtgagtcatgctccactgaatttccaattc
caaagacaagaacttccagtaaaaattgaatttgacttggtgacatatgaaagtaaaaaa
caaatgaagaggcatattgaaaagtcttttcagaaactaaatggagaagcagcacttggc
catgccataaagtggacaattgataatatcttttcagagggacttaaccagagagaaaaa
aaggctatttttatcatatctgttggggaaacaagtccttgggataaggaagtgttgagt
gatgcagccctaagagccaaatgcaaaggctatgctgtatttgtgctttcaataggacct
caatatgattacatagaacttatggaactgtcaagccttcctttggaacatcacatagta
cagcttggcagaatccacaaagctgaacttgaatatgcagtcaaatttctgaagccatta
atacatctgctcaaaacactccatttgacaagactccaccaaataaaattcatttaa
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integrated database retrieval system
