Notechis scutatus (mainland tiger snake): 113421513
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Entry
113421513 CDS
T09026
Symbol
ARHGEF12
Name
(RefSeq) rho guanine nucleotide exchange factor 12 isoform X1
KO
K07532
Rho guanine nucleotide exchange factor 12
Organism
nss
Notechis scutatus (mainland tiger snake)
Pathway
nss04270
Vascular smooth muscle contraction
nss04625
C-type lectin receptor signaling pathway
nss04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
nss00001
]
09140 Cellular Processes
09142 Cell motility
04810 Regulation of actin cytoskeleton
113421513 (ARHGEF12)
09150 Organismal Systems
09151 Immune system
04625 C-type lectin receptor signaling pathway
113421513 (ARHGEF12)
09153 Circulatory system
04270 Vascular smooth muscle contraction
113421513 (ARHGEF12)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
nss04131
]
113421513 (ARHGEF12)
Membrane trafficking [BR:
nss04131
]
Others
Rho GTPase associated proteins
Rho guanine nucleotide exchange factors (GEFs)
113421513 (ARHGEF12)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RGS-like
PH_16
RhoGEF
PDZ
PDZ_6
PDZ_2
PH_13
SOS1_NGEF_PH
Pept_S41_N_bact
PDZ_Tricorn
Motif
Other DBs
NCBI-GeneID:
113421513
NCBI-ProteinID:
XP_026537700
UniProt:
A0A6J1V4N1
LinkDB
All DBs
Position
Unknown
AA seq
1530 aa
AA seq
DB search
MSGTQSAITDRFPLKKPTRHGSILSRESPADKKQKVERCISAHDFDPTDSSSRKTKYSSE
ESRSETYGLVQRCVIIQRDENGFGLTVSGDNPVFVQSVKEDGAAMRAGVQTGDRIIKVNG
TLVTHSNHLEVVKLIKSGSYVALTVQGRPPGSPQIPLADSEVDSAAFGHMSPIMTSPHSP
GSYGNTERITSPVLMGEENNIVHNQKVEILRKMLQKEQERLQFLQEDYSRAPAPRLLKEI
QEAKKHIPQLQEQLSKATGSAQEVVMSSKSISESLQITEVEAERRDGPNRGDCHFGDGPQ
VNDTAESPRSVLKEQSYLDDSPEKTETHETDSPSSLGSPSSRVAPPIIGAEDEDFDGEQE
QINGQCSCFQNIELLKSRPAHLAVFLHHVISQFDPASLLCYLFADLYKQTNSKETRRVFA
EFNQFFLDRAANLKVPVPDEIASDLEKRRLELIPEELHRHCIQAMQEKVFLEVQKHLEDF
RQKRSMGLTLAEGELTRLDAERVQDRMTLEKERACAEQILTKIEDVLVSSQPIEEDKSSS
IQYVVLTYMKHLGVRVKEPRNLDQKRGRIGFLPKIKQSMKKDKEGDEKKRRVFSNILGPP
RRPSRHDSYAIGRAMEIQKQRHPKHLSSSSSVSPEPPDLVKMRQSGISEGMDSAFQPANF
VSPAASGMFLSQEGSKDGETGPKQVGETMNSGDSVDGTPCTPSIIFDFPSPPLDHLQEEE
GEVDRLGESGTPKPFRKVDSVSAGDVQSEDELFDFDMETDQPNWQQLVSREVLLGLKPSE
IKRQEVINELFYTERAHVRKLKVLDHLFYQRVSREGILTAPDLRKIFSNLEDILQLHTGL
NEQMKAVRKRNETSVIDQIGEDLLTWFSEAGEEKLKQATATFCSNQPFALEVIKSRQKKD
SRFQIFVQEAESNPLCRRLQLKDIIPTEMQRLTKYPLLLDNIAKYSEQPLEKEKVKKAAD
HCRQILNFVNQAVKEAENKQRLEDYQRRLDLSYLKQVEGPLLDEFRNLDLTKKKMIHEGP
LTWKVNRDKMIDLYTLLLEDILVLLQKQDDRLVLRCHSKILANTADSKHTFSPVIKLNTV
LVRQVATDNKAFFVISMSENGAQIYELVAQTVSEKTVWQDLIVQMAGNVKVGRGRNVIPL
PQSGPCEEDHEEEDDQPKLKEEQTSPDSSKQSPDKDLGLKTSSPSVTMSEKSEEEELLEA
NKQFGEKLPADLLIKESPEHYSQSSPELSFQASENRWALDALRNLGLLKKLLMQQLGMSE
QVSLEDWHPFSDHRRDLPGAPEENIVKRGLQFSDNDDNALSGPGRTPTGTKANDFELSCD
KWPSNELVSPGEAVSPSGQLMDPLRTNPEPPAKELEGGTSAAEEGGEHFFDAQEAHTDEN
PSEGDVGDGKEKEEVQLRISGNYLILDGYGTVQESSTDEEVTSLVLQCTADRSTMDSAHQ
QPRSRDGQPVTASSPFTEELLASHWQAAKESSSEALRTSFSVESRTLMMCYIQNIEASLQ
HLKEVEENYAALLQHRLSGSITTDEHSDKS
NT seq
4593 nt
NT seq
+upstream
nt +downstream
nt
atgagtggcacacagtccgcaatcacggacaggtttcccctcaaaaaacctacaaggcat
ggcagcattctgagcagagagtctccagcggacaagaagcagaaggttgagcgctgcatt
agtgcccatgattttgacccaacagatagctcctccaggaagacaaagtatagctcagag
gagagtagatccgagacatatggtctagttcaacgatgtgttattattcagcgggatgaa
aatggatttgggttaacagtcagtggtgacaaccctgtctttgtacagtctgtcaaagaa
gatggagcagccatgcgggctggggttcaaactggtgaccggatcattaaggtgaatgga
actctggtaacacattctaatcatttggaggtggttaagctgataaagtcgggttcctat
gtagcgctgactgtgcaggggcgcccacctgggtcgccccagattccactggctgattct
gaggtggactcagctgcctttgggcatatgtctcccatcatgacatcacctcactcccct
ggatcctatggaaacacagagagaattaccagtccagtgctgatgggggaggaaaataac
attgttcacaaccagaaagtagagattttgaggaagatgctgcagaaagaacaggaacga
ctacagttcctgcaggaagactacagccgcgctccggctccccgactgctcaaagagatc
caggaagccaagaagcacatccctcaactgcaggagcagttgtccaaagcaacaggctcc
gctcaggaggtcgttatgtcttccaaatctatatccgaatctttgcagatcaccgaggtg
gaagctgagaggagggatggaccaaacagaggagactgtcattttggggatggcccccag
gtgaatgacacagcagagagtcctcgcagtgtcttgaaagagcagagctatctggatgac
agcccagagaagactgagactcatgaaacagattctccatccagccttggaagcccttcc
tctcgtgtggcacctccaatcataggagcagaagatgaagactttgatggtgaacaagaa
cagatcaacgggcagtgtagctgtttccagaatatagagctactgaaatcacgtcctgct
cacctggctgtctttttgcatcacgtcatctcccagtttgaccctgcttctttgctctgt
tacctgtttgcagacctgtacaaacaaacaaattccaaagagactcgccgagtgtttgct
gaatttaatcaattttttctggatcgagctgcaaacctgaaagttccagttccagatgaa
attgcaagtgatttagaaaagagaaggctggaattaattcctgaagaattgcaccgccac
tgtattcaagctatgcaagaaaaagtgtttcttgaagtacaaaagcaccttgaagatttt
agacagaaacgcagcatgggactcacactggcagaaggagaactgacccggctggatgcc
gaacgtgttcaggaccggatgaccttagagaaggagagagcgtgcgcagagcaaatcctg
actaaaattgaagacgtgctggtgtcctctcagcctatagaagaggataagagttcatct
atacagtatgttgttctcacctacatgaagcaccttggtgtaagagtcaaagaaccccgg
aatctagatcaaaaacggggacggattggattcctgccaaagataaagcaaagtatgaag
aaagataaggaaggggatgaaaagaagaggagagtcttctcaaatatcctgggacctcca
aggaggccgagccgccatgacagctatgcaataggcagagccatggagatacaaaaacaa
cgccatccaaagcacttatcctcatcgtcttcggtcagtccagaaccacctgatttggtc
aagatgcgccaaagtgggatcagtgaaggcatggattcagccttccagcctgctaacttt
gtatctccagcagcttctggaatgtttctatctcaggaaggcagcaaagatggtgaaaca
gggccaaaacaagttggagaaacaatgaattctggtgattctgtggatggcacaccttgt
acacctagcatcatatttgattttccatctcctcccctggaccatttgcaagaagaagaa
ggagaagttgataggttaggagaatcagggactccaaaacctttccgcaaggtggacagt
gtgagtgcaggggatgtccagagtgaagatgagctcttcgattttgacatggagaccgac
cagcccaactggcagcagctggtgagccgtgaagtgttgcttggcttgaaaccatctgaa
attaaacgccaggaagtgattaatgaattattctacaccgaacgtgcacatgtccgtaag
ctgaaagtcctggaccacttgttctaccagcgtgtgtcccgcgaagggattctgacagct
cctgacctgcggaaaatattttcgaacctggaggatatcctccagcttcatactggactg
aatgagcagatgaaagcagtgaggaaaagaaacgagacatctgtaattgatcaaattgga
gaagatttgttaacttggttcagtgaagcaggcgaagagaaattgaagcaagccacggct
accttctgtagcaaccagccttttgctcttgaggtgatcaagtcaaggcaaaagaaggat
tctcgcttccagattttcgtccaggaagctgagagcaatccgctgtgtcgccgattacag
ctaaaagatattattcccactgagatgcaacggctcaccaagtatcccctcttgctggat
aatattgcaaagtactcagagcaacctttagagaaggaaaaagtgaagaaagcagcagat
cactgtcgccagattctcaattttgtgaaccaagctgtcaaagaagccgagaacaagcag
cgtttggaggactaccagcggcggcttgatttgtcctacctgaagcaggtggagggccct
ctgctggatgaattcaggaatttagatctaacgaagaaaaaaatgattcatgaagggcct
ctgacttggaaggtgaatcgtgacaaaatgattgatctctatacgttgctcttggaagat
attctggtattgttgcagaagcaagatgacagactggtgttgagatgtcacagcaagatc
ctggctaatacagctgatagcaagcacacatttagccctgttattaaactgaacaccgtt
ttggttcgccaagtggctacagataataaagcattctttgtcatttccatgtcggaaaat
ggagcccagatttatgaactggtggcacagacagtttctgaaaagacagtatggcaagac
ctcatagtacagatggcaggaaacgtcaaagttggaagaggcagaaatgtaattccattg
ccacaatcgggaccatgcgaggaagaccacgaggaagaagatgaccagcctaaattgaag
gaagaacagactagcccagatagcagcaagcaaagtccagataaagatttggggctgaag
acttcgtctccttcagtaaccatgtctgagaagtcagaagaggaagaacttctggaagcc
aacaagcagtttggagaaaaactgccagcggacttattgatcaaagagtcaccagaacat
tacagccaaagtagtccagagctctcattccaagcttcagaaaatcgatgggcattggat
gcactaagaaacttgggtttattgaagaagttactgatgcagcagcttggcatgtctgaa
caagtgtcccttgaagactggcatcctttttctgaccatagaagagacctgccaggggcc
cctgaggagaacattgtcaagagaggactccagttctcagataacgacgacaatgccctc
tctgggcctggaaggacacccacggggacaaaagcaaatgactttgaacttagttgtgac
aaatggccttcaaacgaattggtctcaccaggggaggctgtgtcgcctagcgggcagttg
atggaccccttgagaacaaacccagagcccccagccaaggaactggaaggaggaaccagt
gctgctgaagagggtggggagcacttttttgatgctcaggaagctcacaccgatgagaac
ccatccgaaggtgatgtgggagatgggaaagagaaggaagaggtgcagctacggatctca
ggaaattatttgatccttgatggatatggcacagtacaggagagctccaccgacgaagag
gtaacttcgctcgttctacagtgcactgcagacagaagcacaatggactctgcccaccaa
caacccaggtctcgggatggccagccagttaccgccagctcaccatttacagaggaattg
ctagcctcccactggcaagctgccaaggaatccagttcagaagcgttaagaacgtccttc
tctgtcgagtcgcgcaccctgatgatgtgttacatccagaacatagaggccagccttcag
catttaaaggaagtggaggaaaactacgccgctcttcttcagcataggctctctggctcc
atcaccacagatgagcattcagataaaagttaa
DBGET
integrated database retrieval system
