Notechis scutatus (mainland tiger snake): 113421756
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Entry
113421756 CDS
T09026
Symbol
THOC6
Name
(RefSeq) THO complex subunit 6 homolog isoform X1
KO
K13175
THO complex subunit 6
Organism
nss
Notechis scutatus (mainland tiger snake)
Pathway
nss03013
Nucleocytoplasmic transport
nss03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
nss00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
113421756 (THOC6)
09122 Translation
03013 Nucleocytoplasmic transport
113421756 (THOC6)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
nss03019
]
113421756 (THOC6)
03041 Spliceosome [BR:
nss03041
]
113421756 (THOC6)
Messenger RNA biogenesis [BR:
nss03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
TREX complex
113421756 (THOC6)
Spliceosome [BR:
nss03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
113421756 (THOC6)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40_WDHD1_1st
WD40
Beta-prop_WDR3_1st
Beta-prop_THOC3
Beta-prop_IFT122_1st
Beta-prop_WDR36-Utp21_2nd
WD40_Prp19
Beta-prop_WDR5
WDR55
WD40_CDC20-Fz
Beta-prop_NOL10_N
WD40_Gbeta
Beta-prop_WDR3_2nd
Beta-prop_EML_2
Beta-prop_WDR41
EIF3I
Beta-prop_EML
WD40_MABP1-WDR62_2nd
Beta-prop_TEP1_2nd
NBCH_WD40
Beta-prop_WDR75_1st
ANAPC4_WD40
Beta-prop_IP5PC_F
Beta-prop_Vps41
Beta-prop_SPT8
DSE1_N
Beta-prop_WDR36-Utp21_1st
Beta-prop_TEP1_C
Beta-prop_EIPR1
Beta-prop_CAF1B_HIR1
WDR54
Beta-prop_DCAF12
WD40_RFWD3
TRM82_WD
Beta-prop_DCAF4
Motif
Other DBs
NCBI-GeneID:
113421756
NCBI-ProteinID:
XP_026538110
Ensembl:
ENSNSUG00000019250
UniProt:
A0A6J1V5S3
LinkDB
All DBs
Position
Unknown
AA seq
327 aa
AA seq
DB search
MDIQRSLELLHMTIYTQSVSPCGRYLAAGNNYGEIAVFSLSAALSSEAKEESKKPVVCFA
AHSGAIYAMVSTDRQLLSAGNGEVKAWNWSEIVKKSCKEAWSRRPPYGSRLEVPEINSLQ
LNLKDNSLLMAGGDCVIHMMDLETGVFTREFQGHTDYIHCLALREQLRECLSGSEDGTVR
LWDLRMGGQVQSIAVNKYEECRRPQNGKWISCLATDSDWMVCGGGPALTLWHLRSVTPTT
IFPLPQCQQQAMFYQDLILSAGHSPTINHLQISGEVKAQIPCLPRCVHSISINERSAEHK
VLTAAGSSHFIDVFTNFGYRAFSLIFT
NT seq
984 nt
NT seq
+upstream
nt +downstream
nt
atggacattcaacgatctcttgagcttttgcacatgaccatatacactcaaagtgtctca
ccttgcggcagatatttagcagccggaaataactatggagaaattgccgtattcagcctg
tcggcagcattaagttcagaagccaaggaggagagcaagaagccagtggtgtgctttgca
gcccacagtggagctatctatgccatggtgtccaccgatcggcagctgttaagtgctggc
aatggagaggtcaaggcctggaactggagcgagattgtgaaaaaaagttgcaaagaagct
tggagtaggaggccaccttatggaagtagacttgaagtaccagaaatcaacagcctgcag
ttgaacctgaaggataatagtctactgatggctggaggtgactgtgtcattcacatgatg
gacttggagactggagtatttactcgtgaatttcagggccacactgattacatccactgt
ttggcccttcgtgagcagctccgagaatgtctgtcaggaagtgaggatgggaccgtacgt
ctttgggatttacgtatgggaggtcaagtccaatcaattgctgtcaacaaatatgaggaa
tgcagacgccctcagaacgggaaatggatcagttgtttggcgacagattctgactggatg
gtgtgtggcgggggcccagcgctcactctttggcacctacgttcagtgacacccaccact
atatttcccttgcctcagtgccagcagcaagccatgttctatcaagatctgattctctct
gctggccacagtccaaccattaatcatttacagatcagtggggaagtgaaagcccaaatc
ccttgcctccctcgttgtgtccactccatttccatcaacgaacgctctgcagagcataag
gtattgacagcagctggaagcagccacttcattgatgtcttcaccaactttggataccga
gccttttcgttaatttttacctga
DBGET
integrated database retrieval system
