Notechis scutatus (mainland tiger snake): 113421900
Help
Entry
113421900 CDS
T09026
Symbol
PKHD1
Name
(RefSeq) fibrocystin
KO
K19865
fibrocystin
Organism
nss
Notechis scutatus (mainland tiger snake)
Brite
KEGG Orthology (KO) [BR:
nss00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
nss03036
]
113421900 (PKHD1)
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
nss03037
]
113421900 (PKHD1)
Chromosome and associated proteins [BR:
nss03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
113421900 (PKHD1)
Cilium and associated proteins [BR:
nss03037
]
Primary cilia and associated proteins
Other primary cilia associated proteins
113421900 (PKHD1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
G8
CEMIP_beta-hel
Beta_helix
DUF1565
NosD
DUF7466
Motif
Other DBs
NCBI-GeneID:
113421900
NCBI-ProteinID:
XP_026538321
UniProt:
A0A6J1V4X4
LinkDB
All DBs
Position
Unknown
AA seq
2126 aa
AA seq
DB search
MECEGPNQPITAKITEIWKNWGQNTQNTFQIQFCGQWSKNLTWFNGHPPQDGDNVIVERG
HILLLDTNTSILNMLHVKGGKLVFIGPGPLELHAHSILVSDGGELQVGSPRKPFCDVAHI
HLHGSAYSEVFSPYGAKFLAVRNGTLSMHGCVPKSLVTYLKSAAYSNDTKLDLMDFVDWK
PGDEVVVCGGSFEGAQKQKEILTIKEINGTELYITSPLRYSYTVTEKQVVEEHLAFRAVV
ALLSRNLVIQGNVTSEKVSHLRLCKAAAISGDNSKCFYKRSERKPGSRDMGAIVIVESYY
DEESVLHLAGVQFYHVGQAFQKHFSALTVVGNAQMTNSYMQHCVVLDSFAQGVSLSGISG
FKIENNTFYNIMGHGIKIGAWHGNNKIRHNTIIGLVGTDGLSNTEVLSPAGIYIQSPDNL
IESNMVCGTGHGYFFHLPPSRLGEPVMSFSNNVAYSCSRYGLLIHPPYHPQKGNNTEPVI
FQNFTAWQCQGGVKIISTSNLQLWNFHISFCKYFGINIVESLGNTSVVNSVLIGHFHEKQ
DGSCMLTGLKTPQKHELLISRTTFMNFDSHNCTAITPCSGCYQGQGGFTVRTEQVLLLNA
PNWLSFPFPHCAILKDLDGSLTGQPGSQILPSLDILPDSCRTIVNASQAVSASCCFGNVI
FHRMSIGLKSPIFSSNLTVTNSRNKVITVNYVSDTLSNANGWMSLLLDQEIYTLSFNSPL
LQRNLQYIATFDNFAVGNYLLLEHEGLPVHSQVTVFCGRRKGSLLQAVPSHSLHKGCDWF
FNKKTNKLTYLVTGRGLIQVTFKVEDIFPLSEQDRVSSFSPPIFRWSLAESWNDVAKGWG
GYNKSIPSAGEDVIILPDRTVLVDMNLPPLRGLYIQGTLEFSLNTSHLLSVACIVIAAGG
VLKVGTLQHPLEERRKVHILLRASERVNCDRLKGLNVGPGTIGVFGKLQLHSAYTKKSWT
HLGNDVAPGNERFMVQDHLDWHPGDKIVVSSSSYEAHQAEIITLEKVNNHSIRIRENLLH
RHIGHSHRLEDGQWILLAAEVGLLTRNIRIKSDMDCIGKLLVKPWGYANQDAGVLQLSNV
EILNLGSSQSPSVDITNSSLKSFIISSSIHHSCGVGIQAITSSGLLLRDNVIFNTIGHGI
HLEGQNHKLISNLVVLIKQPGTSKFWIAGIKTNAVESVMLHNNSVAGSERIAFHIKGQEC
FSAEDLYSGNVAHSSLHGVHLYKGDGFPNCTKITGFLSYKNYDYGIMFHLVGSVVVEKMI
LVDNVVGLLPVLYGPSAKLHCHQKKQHLKLRNSVFVATSTSFDCIKDRIQPLSANVTITD
RAPRNPWRGRIGMLWPSFTLDCNWWPDAPWHKIRNYSIVMGVTTLQDIIFDGFKKSCYTD
DQDICIMTNPGHGGILHLITSEQTRMFHIREQNMFHFHPLQMRINESILGSSGNAICGSS
RKALFKDLDGSALGLDSPVSVFQKSELDWEQACQDAGIYREEGKCILKPSSNVYFCKETD
HAMVILENMDTNLDHKNLSPPLLIASTFVDTFSEATSEGSFCSKELPVIFYSILPSNSLS
KICFAGPVPWSLRLYFNGGHDIVRMLLAISYDEPRSFHVFVKENVIQPVLFFSSLFWENA
TTGTNYFNFQENLLYVAVHSDEPIEIYTHSALHIAFTISENTGEKAQAMLIQQLASFLQI
GQDEIRAVSSTSGNENTLRMIADNSMKRKYQCPPERSCIFTHHSTSQQGGLHPSHVMHSL
RVLILEISDPLHVLKYKLDSSYSSVRFNSLASILIDAQQIGRLQHILRLPVDSLVMMVSS
ASVPATESSGNGSSPTSWSCLYVRPYSISVWIQPSNGVVERPLLRQPQIIFLDKQGRRIV
PLGFPSKPWFVTAYLQNHPEIILKGNTRVKVQDGQANFQNLIVSSSCSDCHLIFKVTSPP
GAALSVESSSFTVSPVAVSEKSAIIFTALLCSVASMLVLGFVVICWLKKSKRNRNKLRQS
LKNKKCPQIQENQTNCGIHQHCIGKEYEHSTSRREDIKLCEEVAEEPLKKLHQKTLSTTF
AETANEIEQDHWLNKRKSTRESLELQELHIKELNEWKKTKQHITDYVQYKEMKGEQFIDQ
KHKRHKEIPVTRSEEDVRGKQEITVS
NT seq
6381 nt
NT seq
+upstream
nt +downstream
nt
atggagtgtgagggacctaatcagccaattaccgccaagattactgagatatggaaaaac
tggggccagaacactcagaacaccttccaaattcaattttgtggacagtggtcaaaaaac
ttgacctggtttaatggacatccaccacaagatggcgataatgtcatagtagaaagagga
catattttactattggatactaacacaagcattcttaatatgcttcatgtcaaaggtggc
aagctggtatttattggccctggtcccctagaacttcacgctcattccatccttgtgtct
gatggaggagaacttcaggttggatctcccaggaagccattctgtgacgttgcccatatc
catcttcatggaagtgcctattctgaagtgttttccccatatggagcaaaatttctggct
gtgagaaatggaaccctgtccatgcatggctgtgtcccaaaatcattagtcacatatttg
aaatcagcagcatactctaatgacacaaaattggacttaatggactttgtggattggaaa
cctggagatgaagttgttgtatgcggaggaagttttgaaggtgctcaaaagcaaaaggaa
attcttaccattaaggaaataaatggtacagaactctacattacatctccactaaggtat
tcttacactgttactgagaagcaggttgttgaagagcatcttgcttttagagctgttgtg
gcattgctgagtaggaatctagtcatccaaggaaatgtcacaagtgaaaaagtttcccat
ctgcgactctgtaaagcggcagctatttcaggagataactcaaagtgcttctataagaga
agtgagagaaaacctgggtctcgggacatgggggctattgtcattgtggaatcctattat
gatgaagagagtgtgctacatttggcaggggtacagttctatcacgtaggacaagcattc
caaaagcatttcagtgcactgactgtggttggaaatgctcaaatgactaactcttacatg
caacattgtgttgtactggattcttttgctcaaggagttagcctatcaggaatatcgggt
ttcaagattgaaaataacactttttacaacattatgggccatggaattaaaataggagca
tggcatggcaataataaaataagacacaatacaattattggactagtgggcactgatggc
ctttccaatactgaagttctgtccccagctggaatatatatccagtctcctgataatttg
atagagagtaacatggtgtgtggcactgggcatggttatttttttcaccttcctccttca
agattaggagaaccagtgatgtccttcagtaataatgtagcctattcttgctccaggtat
ggactcttaatacatccaccatatcaccctcaaaagggaaacaatacagaacctgttata
ttccaaaactttactgcctggcagtgccaaggtggagtgaagattattagcaccagcaac
cttcagctttggaacttccatatttctttttgtaaatattttggtatcaacattgtggaa
agtcttggaaacacttctgttgtcaacagtgtattaattgggcacttccatgaaaagcaa
gatggaagctgtatgttgacagggctgaaaactcctcaaaagcatgaactgttgatttca
cgtacaacctttatgaactttgacagtcacaactgcactgcaattactccctgttctggc
tgctaccagggtcaaggaggttttactgtcagaacagaacaagtcctcctcctcaatgct
ccaaactggctatcatttccattccctcactgcgccatcctcaaagatctagacggctct
ctcacaggacaaccaggaagtcagatccttccttctctagatatacttccagattcctgt
aggacaattgtcaatgccagtcaagctgtcagtgccagttgttgttttggaaatgttatt
tttcatcgtatgtctattggcctaaagtccccaatattttcatcaaatttaacagtaact
aatagtcggaataaggtgatcacggtcaattatgtgtctgacactttatcaaatgccaat
ggctggatgagtcttcttttggatcaagaaatttatactttgtcattcaacagtcctctg
cttcaaagaaatttgcagtacatagctacatttgataattttgctgttggcaattatcta
ttattggagcatgaagggttgccagtccacagtcaagttacagtgttttgtggaagaagg
aaagggtcgctactccaggctgttccttcccatagccttcacaagggttgtgactggttt
ttcaacaagaaaacgaacaagttaacttatttagttacagggagaggcctaatccaagtg
acatttaaagttgaagacatattccctttatcagaacaggatcgagtttcttctttttct
cctcctattttcagatggtcccttgctgaatcctggaatgatgtggcaaagggatggggt
ggctacaataaaagtataccatcagctggtgaagatgttatcattttaccagacagaact
gtcttggtggatatgaatcttccacccctacgaggtctttatatccagggcacgttggaa
ttctcattaaacaccagccatcttctgagcgtggcttgtattgtgattgctgctggtggt
gtcttgaaagtgggcacactgcagcatccattagaagaaagaagaaaggtacacattctc
cttcgggcatctgagagagtaaattgtgatcgattgaaaggtttgaacgttggtcctgga
accattggtgtttttgggaagctgcagttgcacagtgcttacaccaagaagtcatggaca
catcttggaaatgatgttgcacctggaaatgaaaggtttatggtgcaagatcatttggac
tggcatcctggtgataaaattgttgtcagttcctcttcatatgaagcccatcaagctgaa
ataatcactttagaaaaagttaacaatcatagcattaggatccgtgaaaatcttctccat
agacatattggccattcccatagattagaagatggtcaatggattctcctggctgcagag
gttgggcttctgacaagaaacattcggattaaatctgacatggattgcataggaaaactt
ctggtgaaaccttggggctatgcaaaccaagatgcaggtgtgcttcaactttcaaatgtt
gaaattttgaaccttggatcttcacaatctccatcagttgacatcacaaattcatccctc
aagtcttttataatttcctccagcatccatcacagctgtggagttggtattcaagccatt
acaagtagtgggctcttgctacgtgataatgtgatattcaatacaattgggcatggtata
catttagaaggccaaaatcataaactcatcagcaatcttgttgtcttaatcaaacaacca
gggacctcgaagttctggattgctggcatcaaaacaaatgcagtagaaagtgttatgtta
cataataatagtgtggctggttcggaacggatagcctttcatatcaaaggtcaagaatgt
ttctcagcagaggatctttatagtggcaatgtagctcattcaagccttcatggggttcat
ttatataaaggagatggctttccaaactgtactaaaattacaggctttttgtcttacaaa
aactatgactatgggataatgtttcatcttgtaggaagtgtagtagttgaaaagatgata
ttggtggacaatgttgtaggactcttgccagtactttatggaccatctgctaagcttcac
tgtcaccagaaaaaacagcatctgaaactaagaaactctgtctttgtggctactagcact
tcctttgattgcatcaaagacagaatccagcctctttcagccaatgtgacaattacagat
cgagctccacgtaatccctggaggggccgaattggcatgttatggccatcttttactttg
gactgtaattggtggcctgatgctccatggcataaaataagaaactattcaatagttatg
ggagtcacaactctacaagatataatcttcgatggttttaaaaagagttgctatactgat
gaccaagacatctgcatcatgacaaatccaggacacggaggcatcttgcatctgatcaca
tctgagcagaccagaatgttccatatcagggaacaaaatatgttccattttcatccactg
caaatgagaataaatgaatcaatacttggctcatctggtaatgcgatatgtgggagctca
aggaaagctcttttcaaagatttggatggaagtgctctaggattggattcacctgtatca
gttttccaaaaatcagaattggattgggaacaagcatgccaggatgctggcatttacagg
gaagaaggaaaatgcattctcaagccttcatccaatgtttacttctgtaaggaaactgat
catgcaatggtgattttggaaaatatggacaccaatttagatcacaagaacctctctcca
cctttattgatagctagtacctttgtggacactttcagtgaagccacatcagagggatct
ttctgctccaaagaactccctgtgatattttactctatactgccatcaaacagcctttca
aagatttgctttgctggaccagttccttggtcattaagactctactttaatggtggtcat
gacattgtcagaatgcttttagctatctcctatgatgaaccaagaagctttcatgttttt
gtgaaagagaacgttatccaaccagtcttatttttttccagccttttttgggaaaatgcc
acaacaggaactaattacttcaattttcaggagaatcttctgtatgttgctgttcactcg
gatgaacctatagaaatatatacacatagtgctcttcatattgctttcaccatatccgag
aatactggagagaaagctcaggcaatgcttattcaacagttggcaagttttttacaaatt
gggcaggatgaaattagagcagtctccagtacttcaggaaatgaaaacacattaaggatg
attgcagacaatagtatgaagaggaaatatcagtgccctccagagaggtcatgcattttc
actcatcatagcaccagccaacaggggggcttgcatccatcccatgtaatgcatagcttg
agagtgctcatccttgaaatcagtgatccattacacgtcttgaaatataaacttgactcc
tcgtattcaagtgtcagattcaacagtttggccagtatacttattgatgcccaacaaatt
gggagacttcagcatattctcagattgccagttgattctctggtgatgatggtttcgtca
gcttcagttccagcaacagaaagttctggaaatggaagtagcccaacttcatggagttgc
ctctatgtccgtccatacagcatctctgtctggattcagccctccaatggagtggtggaa
aggccactgctgaggcaaccacaaattatttttctggacaaacagggacggagaattgtg
cctttaggtttcccttccaaaccatggtttgtgacagcttacctccagaaccacccagaa
attatattgaaaggtaacacaagagtaaaggtccaagatggacaagctaactttcagaat
ttgattgtgtccagctcttgctctgactgccacctcattttcaaagttacttctcctcca
ggtgctgctttatctgttgaatcaagttcttttactgtttcccctgttgctgtatcagaa
aaatctgccatcatctttactgctctcctgtgctcagtagcctccatgcttgttttggga
tttgttgttatttgttggctcaagaaaagcaagagaaacagaaataagctcagacaatct
ctgaagaataaaaaatgcccccaaatacaggaaaatcaaacaaattgtggtatccatcag
cactgtattgggaaagaatatgaacattccacttctaggagagaagatataaaactgtgt
gaagaagttgcagaagagccattaaagaagttgcatcaaaaaacattgagcaccacattt
gcagaaacagcaaatgaaatcgaacaagaccactggctcaataaaaggaaatcaaccagg
gagtctctggagcttcaggaacttcacatcaaggagcttaatgaatggaagaagaccaag
cagcatatcactgactatgttcagtataaagaaatgaaaggagagcaattcatagaccaa
aaacataaaagacacaaagagatccctgtgacaagatctgaagaagatgtgaggggaaaa
caggaaattacagtatcataa
DBGET
integrated database retrieval system
