Notechis scutatus (mainland tiger snake): 113422377
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Entry
113422377 CDS
T09026
Symbol
CACNA1H
Name
(RefSeq) voltage-dependent T-type calcium channel subunit alpha-1H
KO
K04855
voltage-dependent calcium channel T type alpha-1H
Organism
nss
Notechis scutatus (mainland tiger snake)
Pathway
nss04010
MAPK signaling pathway
nss04020
Calcium signaling pathway
Brite
KEGG Orthology (KO) [BR:
nss00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
113422377 (CACNA1H)
04020 Calcium signaling pathway
113422377 (CACNA1H)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
nss04040
]
113422377 (CACNA1H)
Ion channels [BR:
nss04040
]
Voltage-gated cation channels
Calcium channel, voltage-gated (Cav)
113422377 (CACNA1H)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ion_trans
PKD_channel
Motif
Other DBs
NCBI-GeneID:
113422377
NCBI-ProteinID:
XP_026539051
Ensembl:
ENSNSUG00000017916
UniProt:
A0A6J1V706
LinkDB
All DBs
Position
Unknown
AA seq
2296 aa
AA seq
DB search
MLVILLNCVTLGMFQPCQDIRCQTERCTILEAFDHFIFVFFAVEMVIKMIALGIFGHKCY
LGDTWNRLDFFIVIAGMMEYSLDGHNVSLSAIRTVRVLRPLRAINRVPSMRILVTLLLDT
LPMLGNVLLLCFFVFFIFGIVGVQLWAGLLRNRCFLDSPLQRTHNLTFLHKYYRPEESEE
NPFICSSLRDNGMQKCSSIPNRKESKMDCTLTVDAYIPQLDSLDLGGRNGCINWNQYYNV
CRTGDLNPHNGAINFDNIGYAWIAIFQVITLEGWVDIMYYVMDAHSFYNFIYFILLIIVG
SFFMINLCLVVIATQFSETKQRENQLMQEQRARYLSNDSTIASFSEPGSCYEEFLKYICH
IFRKVKRRALRLYNNWQSKRRKKVNPNSGADDVQGQQSGKRRIMSIHHLIHHHHHHHHHY
HISNGSPQGPRANPGICDLELDVMKPGSQLMLPPSSPSHPSGGTADTESIRSIYHADCHV
EGTSVKCKSSSIAAGGKAANRSGMNYPTILPSPANKAGVPPLSKGKKNEGGEATSPVMPV
VSSPAHLNADCYGKLHHLVGERGLCRTSSILSGLNVPCPLPGPQANTLSCELQNCPFCAS
ILEDPEFEFSEADSYESGEDNNGVYEFTQDVKHGDLRDQIQQRRNKKKKKRKPAKERNKI
TKLWKAFGNKLKRIVESKYFNRGIMIAILINTLSMGIEYHEQPDELTNALEISNIVFTSM
FALEMLLKLLAFGIWGYIKNPYNIFDGIIVVISVWEIIGQADGGLSVLRTFRLLRVLKLV
RFMPALRRQLVVLMKTMDNVATFCMLLMLFIFIFSILGMHLFGCKFGLRTETGDTMPDRK
NFDSLLWAIVTVFQILTQEDWNVVLYNGMASTSSWAALYFVALMTFGNYVLFNLLVAILV
EGFQAEGDANRSDTDEDKTSTNFEEEIEKLKELHASEMKMYSLAVTPNGHLEGKASMPPP
IIMHTAATPMPTPKGSPHMDSAYPFGDSRRGSNISVDPLGFDQKSLSSLRSSPCANWGSR
RSSWNSLGRAPSLKKKSQCSERESLLSGEGKGSTDDEAEEAKLSTLSRGPLHHRAESLDF
RGALDLPELLQVPGVHPPVAMLPLEYQDCNGKMLQVPSELYLHLDSRKEDPFDYDDNMED
SFCYRIRKSLEPYKPKWCKNHEDWSLYLFSPQNRLRANCQKVIAHKMFDHIVLVFIFLNC
ITIALERPDIDPNSTERIFLSVSNYIFTAIFVAEMMVKVVALGFFSGEHTYLQSSWNVLD
GILVFVSIIDIIVSMASAGGAKILGVLRVLRLLRTLRPLRVISRAPGLKLVVETLISSLR
PIGNIVLICCAFFIIFGILGVQLFKGKFYHCEGADIRNISTKTDCRKAHYKWVRRKYNFD
NLGQALMSLFVLSSKDGWVNIMYDGLDAVGIDQQPSRNHNLWMLLYFISFLLIVSFFVLN
MFVGVVVENFHKCRQHQEAEEARRREEKRLRRLEKKRRKAQRRPYYADYSPARKYIHSLC
TSHYLDLFITFIIGVNVITMSMEHFDQPKSLEEALKYCNYLFTFVFVVEAILKLVAFGFR
RFFKDRWNQLDLAIVLLSIMGITLEEIEMNAALPINPTIIRIMRVLRIARVLKLLKMATG
MRALLDTVVQALPQVGNLGLLFMLLFFIYAALGVELFGKLDCSEENPCEGLSRHATFNNF
GMAFLTLFRVSTGDNWNGIMKDTLRECHRDDKHCLTYLPVISPVYFVTFVLIAQFVLVNV
VVAVLMKHLEESNKEAKEDAEMDAEIELEMSRGISTPERTMDGPQTPSKGASAAGLRDPQ
NLLTLHKISVARMHSLPNDSYMFRPVMPAKPPFPLHEGELEAVSCKSPRGSVTSIHSQPV
VTSSLRIPQLAFRPTTPPPSHNTGAPWKLLPPRPAPRTPSFSRLLCRQEAVRKDSLDSSV
VETKQCAQAETRENPPLKKLSHSILGDPQPPPASTSLPGNPPLPHPSPPRPSNTPAPRET
FSQHNISNRMSTHSSILDSSLFESSDLADEEVSHINSSARDWGAQLESQDGPESPFASPA
PSPVPFRNCSTTSLTMGKGKDKDLKKFYSVDTRGFLAKPTWADDQRRHSIEICPSVGHGD
RGFADASERRRLPLQMQSESEYLHGIRRKKKMSPPCISIDPPVEEESSSTTTRNKASENS
LLRRRTPSCESTAYRDPLELAEGQPGELACKADRWAPLACRGEHLTIPSFSYEPTDPGST
GEPCERLSESSQATGPSVDPPPEGPELQQTDPLETLGDPSEPNQEDLGGGRNCALLQHGQ
VPGTPSDTEEVVDEPV
NT seq
6891 nt
NT seq
+upstream
nt +downstream
nt
atgctggttatcctcttgaattgcgtcacccttgggatgttccagccatgtcaggatatc
aggtgccaaacagaaaggtgcacaatcttggaggcatttgatcactttatcttcgtcttc
tttgctgtggagatggtcatcaagatgattgccctgggaatctttggccacaaatgttat
ctgggagacacctggaaccgcctcgacttcttcattgtcattgctggcatgatggaatat
tctctggatggacataatgtcagcctttcagccatccggactgtgcgggttctcaggccc
ttacgagccattaacagggtgccaagtatgcgcattcttgtcaccttgctcctagacact
ctgcctatgttaggcaacgtcctcctcttgtgtttcttcgtctttttcatctttggcatc
gtgggggtgcagctctgggccgggctgctgaggaacaggtgtttcctggattcccccttg
caaaggacacacaacctgactttcctgcataagtactaccggccggaagagagcgaggag
aaccccttcatctgttcgtccctccgggataacggcatgcagaagtgctccagcatccca
aaccggaaggagtccaagatggactgcacgttaaccgtggacgcttacatcccacaattg
gactcgctggacttgggtggccgcaacggctgcattaactggaaccagtattacaatgtt
tgcaggacgggggacttgaacccacacaatggagctattaattttgataatattggctat
gcttggatagctatttttcaggttataaccctggaaggatgggttgacatcatgtattat
gttatggacgcacactctttttacaattttatatattttatactacttataatagttggt
tctttcttcatgattaacttgtgcctggttgtgatagcaacacagttttctgaaaccaaa
cagcgggagaaccagctgatgcaagagcagcgagcccgctacctctccaacgacagcaca
attgccagcttctctgagccgggaagctgctacgaagagttcctcaaatacatctgccac
attttcaggaaagtcaaacggagggccctgcgcctgtacaacaactggcagagcaagcgg
cggaaaaaagtcaaccccaacagtggcgcagacgatgttcagggccagcagagtggcaag
cggcgcatcatgtccatccaccacttgatccaccaccaccaccaccaccatcaccactac
cacatcagcaacgggagcccccaggggccgagggccaacccagggatttgtgacctggag
ttggatgtcatgaagcctggaagccaactgatgcttcctccatcttcgcccagccaccca
agtggtggaactgcagatacggagtccatccgcagtatctaccacgccgactgccacgtg
gaagggacctcggtgaaatgcaagtcttccagcattgctgcaggtggcaaagctgccaat
cggagcggcatgaactacccaaccatcttgccttctccggcaaacaaagccggtgtcccc
cccttgtccaaagggaagaaaaatgagggtggtgaggcgacctcccccgttatgcctgtg
gtcagcagcccagcccatctgaacgcagattgttatgggaagctccatcatctagtggga
gaacgtggcctctgccggacctccagcattttgtctggcttgaatgtgccgtgtcccttg
ccagggccccaagccaacaccttgagctgtgagctgcaaaactgcccattctgtgccagc
atcctggaggatcctgagtttgagttcagcgaggcagacagctatgagtcaggagaggac
aacaacggggtctacgagtttacccaggatgtaaaacatggggatttacgggaccagatc
cagcagcggaggaacaagaaaaagaagaaaaggaaaccagccaaggagaggaacaagata
accaagctctggaaggcctttggcaacaagctgaaacggattgtggagagcaagtatttc
aaccgtgggatcatgatcgccattctcatcaatacgctgagcatgggcattgagtatcat
gaacagccggacgagctaaccaatgccctggagatcagcaacattgtcttcacaagcatg
tttgctctggagatgctcctcaagcttttggcttttggcatctggggttacatcaagaac
ccctacaacatttttgatggcatcattgttgtcatcagtgtctgggagatcattggccag
gccgacgggggcctttcggtgctgaggaccttccgtctcctccgggttctcaagctggta
cggttcatgccggctctccgccggcagttggtggttctcatgaagaccatggacaacgtg
gccaccttctgcatgctgctcatgctcttcatcttcatcttcagcatcctaggtatgcat
ctttttgggtgcaagtttggcttaaggaccgagacaggagacaccatgccagaccgaaag
aacttcgattccctgctgtgggcaattgtcaccgtgtttcagatcctgacccaggaagac
tggaacgtagtcctctacaacggaatggcctccacctcctcctgggctgctctctacttt
gtggctctgatgacctttggcaattatgtcctcttcaacctcttggtcgccatcctggta
gaaggtttccaagctgagggtgacgccaacagatctgacacagatgaagacaaaacatcg
accaactttgaggaagagattgagaagctgaaggaactccatgcttctgagatgaagatg
tattcactggccgtcacgcccaacggccacctggagggcaaggccagcatgcccccgccc
atcatcatgcacaccgcagccacccccatgcccaccccaaagggctccccacacatggac
tccgcctacccttttggggactccaggaggggcagcaacatctcggtggacccgctcggc
tttgaccagaaatctttgtccagcctccgcagctccccctgtgccaactggggcagccgc
cgctcgagctggaacagcctgggccgggcccccagcctgaagaagaagagccagtgcagc
gagcgggagtccttgctctcgggggagggcaaaggcagcacggacgatgaagccgaggag
gccaagctcagcaccctcagccggggccccctgcaccaccgggccgagtccctagacttc
cgaggtgccttggacctgccggaactcctccaggtgcctggggtgcaccctccagtagcc
atgctgcccctcgagtaccaggactgcaatggcaagatgctgcaggtgcccagcgagctc
tacctgcacctggacagccgcaaagaggatcccttcgactacgatgacaacatggaggat
agtttctgctacagaatccgcaagagcttggagccctacaagcccaaatggtgcaagaat
catgaggactggtccctctatttgttctcccctcagaatcgcctccgggccaattgccag
aaggtcattgcgcacaagatgtttgaccacatagtcctggttttcatcttcctcaactgc
atcaccatcgccttggagcgcccagacatcgatcccaacagcacggaacggatattcttg
agtgtctccaactacatatttacggccatttttgttgctgagatgatggttaaggttgtg
gctcttggcttcttctccggggagcacacctacctccagagcagctggaacgtcttggat
gggatcctggtctttgtgtccatcattgacatcatcgtttccatggcatcagcaggcgga
gccaagattttaggggtgctgagggtacttcggctgctgcgcaccctgagacctttacgg
gtcatcagccgagctccaggtttgaaactcgtggtcgagacgctgatctcgtctctccgg
cctatcggcaacattgtcctgatctgttgcgctttctttattatcttcggcattttggga
gtgcagctcttcaagggcaagttctaccactgtgagggggctgacatccgaaacatctcc
actaaaactgactgcaggaaagcgcactacaaatgggtccggcggaagtataactttgac
aatttggggcaggccctgatgtccctgttcgtcctctcttccaaagatggctgggtgaac
atcatgtatgatggattggatgccgtggggattgaccagcagcccagccggaaccataac
ctctggatgcttctctacttcatttccttcctcctcatcgtcagcttctttgtgctcaac
atgttcgtcggcgtggtggtggagaacttccacaagtgtcggcagcaccaggaggctgag
gaggcccggcggcgcgaggagaaacggctgcggcgtctggagaaaaagcgcaggaaagct
caacggcggccgtactatgccgattattcacccgcccggaaatacatccactcgctctgc
accagccattatctggaccttttcatcacttttatcattggcgtcaacgtcatcacgatg
tccatggagcactttgatcaacccaagtctctagaagaggccctgaaatactgtaactac
ttgttcaccttcgtctttgtggtcgaagccatcttgaaactggtggcctttggcttccgg
aggttcttcaaggacaggtggaaccagctggatctggccatcgtcctgctctccatcatg
gggatcacgctggaggagatcgaaatgaacgccgcactccccatcaaccccaccattatc
cgcatcatgagggtgctcaggattgctagagtgctgaagctgctgaaaatggccacaggg
atgcgggccttgctggacacggtggttcaggccctcccccaggtggggaacctcggcctg
ctatttatgctccttttcttcatctacgctgccctgggggtagaattatttgggaagtta
gactgcagcgaagaaaatccttgtgaaggcctcagtcggcacgctaccttcaacaacttt
gggatggccttcctcaccctctttagggtatcaactggggacaactggaatgggatcatg
aaggataccctccgggaatgccaccgggatgacaagcactgcctcacctacctgcctgtc
atctccccggtttacttcgtcaccttcgtcctcatcgcccagtttgtcctggtcaacgtg
gtggtggccgtcctgatgaagcacttggaagaaagcaacaaggaggcgaaggaagatgcc
gagatggatgctgaaattgagctggagatgtccagagggatcagcacaccagaaaggacc
atggatgggccacagaccccttccaagggggcttctgctgctggtctcagggacccccag
aaccttctgacccttcacaagatctcagtggcacggatgcattcactgcccaacgacagc
tacatgttccgtcctgtgatgcccgccaagcctcccttcccactccacgaaggggagcta
gaagccgtctcctgcaagtcaccccgaggatccgtcacatccatccattctcagccggtg
gtcacttcgtcactgaggatcccacagttggccttccgcccaacaacaccccctcctagc
cacaacacgggagctccgtggaagcttctacccccccgccctgcccctcgcacccccagc
ttcagcaggctgctgtgcagacaggaggccgtccggaaggactccttggatagctcagtg
gtggagacaaagcagtgcgcccaggcagagacccgtgaaaacccacccctgaaaaagttg
tctcacagtattttgggggatcctcagcctcccccagcctccacatccctcccgggcaat
cctcccctcccccacccctcccctccccgcccttcaaacacccccgcccccagggaaacc
ttcagccagcacaacatctcaaacaggatgtccacccacagcagcatcctcgacagctcc
ctcttcgagtcctccgacttggcggacgaagaggtcagccacatcaacagctccgccagg
gattggggggcgcagctggagagccaggatggcccggagtcccctttcgcctccccggcg
ccctcccccgtccccttcaggaactgcagcacaaccagcttgaccatggggaagggcaag
gacaaggacctgaagaagttctacagcgtggacacccgggggttcttggccaagccgacg
tgggcggatgaccagcgacggcactccattgagatctgcccttcggtcggccacggggat
cgcggcttcgcagatgcctctgaaaggaggaggctgcctctccagatgcagtcggagtcc
gagtacctgcacggcatccggaggaagaagaaaatgagccccccctgcatctctatcgac
cctcccgtggaggaagaaagcagctccaccacgacgcgcaacaaagcctctgagaacagc
ctgctgagacggaggacgccctcctgtgagtccacggcctacagggaccccttggagctg
gccgagggtcagcctggagaactggcctgcaaggcagaccgctgggcacccctggcctgc
cgaggggagcatttaaccatcccgagcttctcctacgagccaacggaccctggttccacg
ggtgaaccctgcgaacgcctctcggagagtagccaagctacgggcccctctgtggatccc
ccaccggagggtccggagttgcagcaaacagaccctttggagactcttggcgacccctct
gagccaaaccaagaagacctcggagggggcaggaattgtgccctcctgcaacacggacag
gttccagggaccccaagcgacacagaagaggttgtggacgagccggtatag
DBGET
integrated database retrieval system
