Notechis scutatus (mainland tiger snake): 113422406
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Entry
113422406 CDS
T09026
Symbol
CIITA
Name
(RefSeq) MHC class II transactivator
KO
K08060
MHC class II transactivator [EC:
2.7.11.1
]
Organism
nss
Notechis scutatus (mainland tiger snake)
Brite
KEGG Orthology (KO) [BR:
nss00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
nss01001
]
113422406 (CIITA)
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
nss04054
]
113422406 (CIITA)
Enzymes [BR:
nss01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.11 Protein-serine/threonine kinases
2.7.11.1 non-specific serine/threonine protein kinase
113422406 (CIITA)
Protein kinases [BR:
nss01001
]
Serine/threonine kinases: Other
TAF1 family
113422406 (CIITA)
Pattern recognition receptors [BR:
nss04054
]
Cytoplasmic pattern recognition receptors
NOD-like receptors
113422406 (CIITA)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
NACHT
NLRC4_HD2
AAA_16
AAA_22
AAA_25
DUF87
Motif
Other DBs
NCBI-GeneID:
113422406
NCBI-ProteinID:
XP_026539119
UniProt:
A0A6J1VGT7
LinkDB
All DBs
Position
Unknown
AA seq
1006 aa
AA seq
DB search
MDIFKQILPEVRGILLTASALQVQSFLDSLLSEGMISQEYYQTLLYEKDPEDLARKVALT
LLGKQAGPSSSSCVSYLQLSGKSKENTKNAAVSLRTRNLTGDLSPGGIPPETHCLQSESP
PPSMAEMAPAVQAPEAVSEDPESTEVFYTVERDESGEVVCLCSNMGEAYNKIAALAEYLL
KDQQDAPVDEHFESLFWEVGAAEGPGGCAEAKTWGPSSEAPEAKRQRLAHPPALCIVSGD
PLATPPRPGQDGTGSPGDFHVQVLVASVGPAGRSPEALGPSANGQLWCIPRHGSNIQMIF
TFGNAQQPCLPADPPTCPGSGRAFCKRLKEHFRRECRPGPGQPPGPSFVYLEKDLVQHHL
DGRGGRRAGRRRCHLGEQASVERSHLFQGTRKPGLGSRVILVLGKAGTGKSHLVQKICLD
WADGRMPQFDFVFRFDCRRLSLLQGSCHDFRALLSDSLGGSCQGVDDVYHSLLQKPERLL
LLFDGMEDLKEDPEGFSSTSGSPAGRGAHRLGATLAPLFQRKGLSGCTFLLTGRRKGRLP
PCFPRVDSVLEVVGFSPEQAALCLSGSFEGSSPWEQEANPIRSSPYLLSLCCNPGLCRFI
GQAASERRGQELPSTLTGLFATYLLQKAAGSGCQAIPALAEVSWSLGQRYQRALLSEHFP
SADAKELALRTGLMAEQRGVCVFSNFAVQNFLVALHLTLAKEIKGKKLTKFLGLGAKFRK
FLSSWGLVPRFLSGLLFLKDDLSSSLLLGKGGDLEDTENLIARKQRSLSRFIRKLPLRDL
RPDKLLELLHCVHETEDQPLRKHLALELRPDLSFVGFSLAPPDVSVLHAVLGTSPKKFSL
DLRGTGIHLDGLRKLVGLKNVTKFRVSLREAVGLWKHLWGAQEREALQAALEKFLVEPFR
AKTMGDVDALLALVQLQRDMAEGREDSAGSGVRLIPAIAGFLQLEFSLGPSCGLEGFRKL
ADSLVAFSALQHLEKRHPWWSSPLGDEGVRSLTRVLPRLASLETLK
NT seq
3021 nt
NT seq
+upstream
nt +downstream
nt
atggatattttcaagcaaatcttgccagaagtgaggggcattttattaacggcttcggcc
ctgcaagttcaaagcttcctggactccctgctgagtgaaggaatgatatcacaggaatat
tatcagaccttactctatgaaaaagaccctgaggacttagcaaggaaggttgctctgacc
ctgcttggaaaacaggctgggccatccagttccagctgcgtctcttacttacagctttct
ggcaagtctaaagaaaacactaagaatgcagctgtctcactgaggactagaaacttgacc
ggtgacctgagccctggagggatcccaccggagacccactgcctgcagagcgagagcccc
ccaccatcgatggctgagatggcgcccgcagttcaagcgcctgaggcggtcagcgaggat
ccagagagcaccgaggtcttctacacggtggagagggacgaaagcggagaagtcgtctgc
ctctgctccaacatgggggaggcctacaacaaaatcgctgccctggctgaatatttgctg
aaggaccagcaagatgccccggtggacgagcattttgaaagcctcttttgggaggtgggg
gctgcggaagggcctgggggctgcgcagaggccaaaacctggggaccatcctcggaggcc
cccgaagccaagcgccagaggctggctcacccaccggctctgtgcattgtgagcggggac
cccctcgccactccccctcgccccggccaggatggcaccggctctccaggcgacttccac
gtgcaagttttggtggcctccgtgggccctgcgggcagatctccagaagcgctcgggccc
tctgccaatgggcagctctggtgcatcccacgccacgggagcaacatccagatgatcttc
accttcggaaacgcccagcaaccctgcttgcctgcagatcccccaacctgcccagggtcg
gggcgggctttctgcaagcggctgaaggagcatttccgcagagaatgccgtccggggcct
gggcagcccccgggaccctccttcgtgtacctggagaaggacttggtgcagcatcacctg
gacggcaggggcgggaggcgtgcgggtcggaggcgctgccacctgggagagcaggcctcc
gtggagaggagccacttgttccagggcaccaggaaacccggcctgggcagcagagtcatc
ctggtcttgggcaaggccggcacggggaaaagccacctggtgcagaagatctgcctggac
tgggccgatggccggatgccccagtttgacttcgtcttccgattcgactgccggaggctg
agcctgctgcagggctcctgccacgacttccgggccctgctctcggattccctgggcggc
tcctgccagggcgtcgatgacgtctaccacagcctcttgcagaagccagagcggctcctc
ctgctttttgacggcatggaagacctgaaggaggatcccgagggcttctcctccacgtca
gggagcccggccggcaggggagcccaccgcctgggtgccaccttggcccccctcttccaa
aggaaggggctcagcggctgcactttcttattgaccggacggcgcaaagggaggctcccc
ccgtgtttcccccgggtggactcggtcctggaggtggtgggcttctccccggagcaggcc
gcgctctgcctctccggctctttcgagggctcttccccctgggagcaggaggcgaacccc
atcaggagctccccttacctgctcagcctttgctgcaatcccggcctctgccggttcatt
ggccaggcggcgtctgaaaggagaggccaagagctgccctccaccctcacgggcctcttc
gccacctaccttctccagaaggcggcaggttccgggtgccaggccatccctgccctggcc
gaggtctcttggtctctcgggcagcgttaccaaagggccctcctgagcgagcacttccct
tccgcagacgcgaaggagctcgctctcagaacgggactcatggcggagcagcggggcgtt
tgcgtcttctccaacttcgctgtccagaatttcttggtggccctgcatttgactctggcc
aaagagatcaagggcaaaaaactcaccaaattccttggtttgggggccaagttccggaaa
tttctctcttcgtggggcctggtgccccgtttcttgtccgggttgctgttcttaaaggac
gacctcagcagttctctccttttgggtaaggggggtgacttagaagacacggagaacctg
atcgcaaggaagcagaggagcctctccagattcatccggaaacttcccctgagggatctc
aggccggacaagttgctggagctgctccactgtgtccatgaaaccgaagatcagcccctc
cggaagcacttggccctggagctccggccggacctctccttcgtgggcttctcactcgcc
ccgccagatgtcagcgtcctgcacgctgtgctgggaacgtcccccaagaagttctcttta
gacctgagggggaccggcatccacttggatggactcaggaagctggttggcctgaagaac
gtcaccaagttcagggtgtccctcagggaagcggtggggctctggaagcacctgtggggc
gcccaggagagggaagccctgcaggcagccctggagaagttcctggtggagcccttcagg
gcgaagacgatgggggacgtggacgcccttctcgccctggtgcagctgcagagagacatg
gccgaaggcagggaagactctgcgggttccggcgttcgtcttattccagccatcgctggg
ttcctgcaactagaattcagccttgggcccagctgcggcttggagggcttccgaaagttg
gcggattctttggtggccttctcggctcttcagcacttggagaagcggcacccctggtgg
tcctcccccctcggagatgaaggggtgaggtccctcacccgcgtccttcctcgcttggcg
tccctggaaacgctgaagtaa
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integrated database retrieval system
