Notechis scutatus (mainland tiger snake): 113422458
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Entry
113422458 CDS
T09026
Symbol
COL20A1
Name
(RefSeq) collagen alpha-1(XX) chain
KO
K24357
collagen type XX alpha
Organism
nss
Notechis scutatus (mainland tiger snake)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
VWA
fn3
Collagen
Pur_ac_phosph_N
VWA_2
FN3_Tor_3rd
CBM_4_9
Motif
Other DBs
NCBI-GeneID:
113422458
NCBI-ProteinID:
XP_026539215
UniProt:
A0A6J1V929
LinkDB
All DBs
Position
Unknown
AA seq
1278 aa
AA seq
DB search
MQRSKVVLLGRSYFWISCLVLAGFITLQVCGQGSNRLKLTVLSEDRLQMKWKESEGNTSG
YKVCVKPMAGRVEPGKKRQNTPLFKPDDYMLNAEPTLMLPTLPSVIEFEEDYLARRKMSS
DSFRKVSHFHCDTSAATDIILLVDGSWSIGRNNFGLIREFLASLLAPFNIAEDKIRVGLS
QYSSDPRTEWDLNTYSTWEQVSKAIRNLRYKGGNTFTGLALTHVLEHNLKEEVGARPEAS
KLLILLTDGKSQDDASPPAQTLKNMGIKIFAVGVKNADETELRQVASEPLEMTVYNVVDF
PLLRSLVSRLTWLLCAWIKEKNQKNIGDPMKTMSAKSGVHLSPTNLLLKEITSRSMHLIW
NSPLITPQRYRVVYYPSRGGIPKEVALDGATSSVELLNLTPQTEYLVSVFPVYENAVGDG
LRGISSTLPLSAPRSLRTSEISHNSIKLMWEPVEGATQYLILSSSTPNGAEDDTKELKVE
HPEVWIRGLTPSTEYSLAVYAMYGEDASNPASIQETTLALSPPSYLHFSNISHMSVHVNW
AAASQAVKSHRVMYSSSRGSNVGEVEVPGNASFAVLKPLSSLTQYFVRVVSVYDEGNSFP
IMGNFTTLKVPPPSQLKVTELSRSEVQLEWEASAASDVVLYQIKWNVLGEDAEREISVPG
NLASSVLPGLKENTEYKISIWAYYKDGAQSDTISIWHRILSEPSSASRTGLVSGRIQSIV
LHSLLPARVYTVTVIAVYAAGESDPVSVIGRTATVLARLPTMKESQFFKTEGCPSLRSTD
GPIQGFDMMEAFGLMGKDYASIKGVAMEPYIFLGTHTYTLYRDIQLTRKTSEVLPFGLPT
EYTLTFLLRLLPESPREAFSIWQITDEDFQPLLSIILDPLKKSLAYFHRDHDADIEEVTF
DQQEVKKIFYGSFHKVHVLVSHGWVRLYVDCKKIGEKILGKSEILSTAGFITLGKLTRTR
GPRSGSAMGNPGRRGIQGEQGEPGPKGEPGPPGQAGPKGLGGQQGITGSQGLTVQGPIGP
PGLKGDKGDSGSPGIQGMMGLQGAAGKDGPQGSKGVRGLEGAAGPPGPPGPRGFQGLAGA
RGNPGDKGPPGEVGPTGLPGPKGERGEKGEAQSLSTIYHLVNQACERLIQSHVLKFDTFV
HEQSRKPVPIREEEELKAGEPGPMGQTGFPGIKGERGEIGMPGLPGRNGYPGERGVPGPK
GEKGSFGQRVEGSEGPRGQAGPPGEMMVGQQGSKGPPGSIGPSGFPGARGQPGDSGPAGR
CLPTGCHRDSTRDAGLIP
NT seq
3837 nt
NT seq
+upstream
nt +downstream
nt
atgcagcgatccaaggttgtcctcctgggccggagttatttctggatttcttgccttgtg
cttgcaggtttcatcactttacaggtgtgcggacaagggtcaaaccgcctgaagttgaca
gtcctttcagaagacagattacaaatgaagtggaaggaaagcgaaggaaacaccagcggg
tataaagtttgtgtaaagccaatggcaggaagagttgagccagggaagaaaaggcaaaac
accccactttttaagcctgatgattatatgctcaatgctgagccaacgttaatgctgcca
accttaccgagcgtaatagagtttgaagaggattatctggcccgaaggaaaatgagtagc
gacagcttcaggaaagtttcccatttccattgtgatacctctgctgcaactgatattatc
ctgctggtggatggatcttggagtatcggacgcaacaattttggactcattcgagaattc
ctggcatctttgctggcacctttcaatattgctgaagataagatcagagtaggtttgtcc
caatacagcagtgacccacggacagaatgggatctgaatacgtattccacctgggaacag
gtgtccaaagccattcggaatttgcgctacaagggagggaacacttttacaggattggcg
cttactcacgtcctagagcacaacctgaaagaagaagtgggtgcaaggcctgaagcttct
aaactcctcatccttttgaccgatggcaaatctcaggatgatgccagcccacctgcccag
actttgaagaatatgggaatcaagatattcgctgtgggggtgaaaaacgctgatgaaaca
gagctgcgccaagtggcctccgaaccccttgagatgaccgtctacaatgtggtggatttt
cctctgctccgttctctggtcagcaggctcacatggctcttatgtgcttggatcaaggag
aagaaccagaagaatataggggatccaatgaaaaccatgtcagcgaaatctggagtccac
ttgagcccaaccaatctcctcttaaaagaaattacttccagaagtatgcacctcatctgg
aactcaccactcataacaccccagagatacagagtggtctattacccatcgcgaggtgga
attcccaaagaggttgctctggatggagccacctcgagcgtggagcttcttaatctgaca
ccacagacggaatatctggtttcggtcttccctgtttatgagaatgctgtaggtgacggt
ctcagaggcatcagttcaacactaccattgtctgcgcctcgatctctcagaacatctgag
atcagccacaacagtatcaagctcatgtgggaaccagttgaaggggccacgcaatatctt
atcctgtcttcctcaacacccaacggtgccgaagatgatacaaaagagctgaaagttgaa
cacccagaagtttggatcaggggtttgactcctagcaccgaatactccctagcagtttat
gcaatgtatggagaagatgccagcaaccctgcaagtattcaagaaactactttggccctg
agccctccaagctatttgcatttctccaacatcagccatatgtcggtccatgtcaactgg
gcggcagcttcacaagccgtgaaaagtcaccgagttatgtattcctccagcagaggaagc
aacgtaggtgaggtggaggtccctggaaacgcctcctttgctgtgctgaagcccctctcc
tcactgacacaatattttgtccgcgtggtctccgtttacgatgaagggaactcgtttcca
ataatgggcaattttacgacattaaaggtgcccccaccgagccagctgaaggtcaccgag
ctctccagaagtgaggtccaactggaatgggaagcatccgcagcttctgacgtggttctt
taccagatcaaatggaacgtgcttggagaagacgcagaacgggagatatctgttcctgga
aacttggcatcttccgttttgcctggtttgaaagaaaataccgaatataaaatatccatc
tgggcatactacaaggacggagcccagagtgataccatttccatttggcacagaatcttg
tccgagccttcctcagcctctaggactggcctagtctctggcaggattcagtccattgtt
cttcattctctcctgcctgctagagtttatacagtgaccgtaattgcagtctacgctgca
ggagaaagtgaccctgtatctgtcattggccggacagctacagtcttggctcgattgccc
accatgaaagaatcccaatttttcaaaacagaaggctgcccttcacttcgctctacggat
ggccccatacaaggttttgacatgatggaggcttttggattgatgggcaaggattatgcc
tccatcaagggggttgctatggaaccttacatcttcttaggaactcacacctacactctc
tacagagatatccaactaacccggaaaacaagtgaggtgttaccttttggacttccaact
gaatacacccttacttttctactccgccttctaccagaaagtccccgagaggccttttct
atctggcagataacagatgaggacttccagccgcttctcagcatcattcttgatcctctt
aagaaatccttggcgtatttccatcgtgaccatgacgctgatatagaagaagtcaccttt
gatcaacaggaagtgaagaagatattctatggaagctttcataaggtccacgtattggtg
agccatggctgggtcagactctacgttgactgcaagaaaataggagaaaagattcttggg
aaatcagagatcctttcaacggcaggctttatcacgcttgggaagctgacaagaacacga
ggaccacggagtggatcagccatgggcaatcctgggcgaaggggcatccagggagaacag
ggggagcctggccccaagggggaaccaggtcctccaggccaagctggaccaaaagggcta
ggaggacagcaagggatcactggttcgcaaggattaaccgtgcaaggacccattggaccg
ccgggtcttaagggcgataaaggggacagcggtagtccaggaatacagggtatgatgggt
ctccagggagcagcaggtaaagatggccctcaaggatcaaagggtgttcgaggacttgaa
ggagcagctggaccaccagggcctccaggaccacggggattccaaggcttagcaggggcc
cggggtaaccctggagacaaaggccccccaggagaagtcggacccacggggctgcctggt
ccaaaaggagaaaggggggagaaaggtgaagcacagtccctgtctaccatctaccatctg
gtaaaccaagcctgtgagcgtctgatccagtctcacgtgttaaagttcgacactttcgtt
cacgagcaatcgcggaaacctgtccccatccgggaggaggaggaactgaaggctggagag
cctggtccaatgggtcagactggtttccctggaattaaaggtgaaagaggagaaattggg
atgcctggacttccaggaagaaatggatacccgggagaaagaggtgtccctgggcccaag
ggagaaaaaggctcttttggacaaagggtggaaggttctgaaggaccaagaggtcaagca
ggccctccaggagaaatgatggttggccaacaaggctccaaaggacctccaggtagcatt
ggtccctctggatttcccggggctcgtggtcagcctggggattctggtcctgcaggtaga
tgtcttcctacaggatgccacagagatagtacaagagatgcagggctgatcccatga
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integrated database retrieval system
