Notechis scutatus (mainland tiger snake): 113422539
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Entry
113422539 CDS
T09026
Symbol
PBRM1
Name
(RefSeq) protein polybromo-1 isoform X1
KO
K11757
protein polybromo-1
Organism
nss
Notechis scutatus (mainland tiger snake)
Pathway
nss03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
nss00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
113422539 (PBRM1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
nss03021
]
113422539 (PBRM1)
03036 Chromosome and associated proteins [BR:
nss03036
]
113422539 (PBRM1)
Transcription machinery [BR:
nss03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
113422539 (PBRM1)
Chromosome and associated proteins [BR:
nss03036
]
Eukaryotic type
Chromatin remodeling factors
PBAF complex
113422539 (PBRM1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Bromodomain
BAH
HMG_box
HMG_box_2
HMG_WDHD1
Motif
Other DBs
NCBI-GeneID:
113422539
NCBI-ProteinID:
XP_026539338
Ensembl:
ENSNSUG00000011408
UniProt:
A0A6J1VFJ5
LinkDB
All DBs
Position
Unknown
AA seq
1716 aa
AA seq
DB search
MRRLAFRGAGCTLKKLDSMSSKRRRATSPSSSASGGDFDDGHHSTNTPGPSRKRRRLSNL
PTVDPIAVCHELYNTIRDYKDEQGRLLCELFIRAPKRRNQPDYYEVVSQPIDLMKIQQKL
KMEEYDDVNVLTADFQLLFNNAKSYYKPDSPEYKAACKLWDLYLRTKNEFVQKGEADEDE
DEDEGHDNQGTISEISSPGYLKEILEQLLEAVVVATNPSGHLISELFQKLPSKVQYPDYY
AIIKEPIDLKTIAQRIQNGSYKSIHAMTKDIDLLVKNAKTYNEPGSQVFKDANAIKKIFN
MKKAEIEHSELTKSSLRVRYCKQNRNIERTANLTASKLTNPSSQGKGSVVDERNSSNKYY
RNKRAVQGDRLSAITMTLQYGSESDEDAVLAAAARYEEGESEAESIASFMDISNPLYQLY
DTVRNCRNNQGQLISEPFFHLPSKKKYPDYYQQIKMPISLQQIRTKLKNHEYETLDHLEC
DLNLMFENAKRYNVPNSAIYKRVLKLQQVMQAKKKELARRDEIEDGDSMISSATSDAGSS
KRKSKKNIKKQRMKILYNVVLEAREPGTGRRLCELFMVKPSKKDYPDYYKIILEPMDLKI
IEHNIRSDKYAGEEAMIEDMRLMFRNARHYNEEGSQVYNDAHILEKILKEKRKELGPLLE
DDEIASPKLKLSRKTGISPKKSKYMTPMQQKLNEVYEAVKNYTDKRGRRLSAIFLRLPSR
SELPDYYLTIKKPVDMEKIRSHMMANKYQDIDSMVEDFVMMFNNACTYNEPESLIYKDAL
VLHKVLLETRRDIEGDEDSHVPNVTLLIQELIHNLFVSVMSHQDDEGRCYSDSLAEIPAV
DPSFPNKPPLTFDIIRRNVENNRYRRLDLFQEHMFEVLERARRMNRTDSEIYEDAVELQQ
FFIKIRDELCKNGEILLSPALSYTTKHLHNDVEKEKKEKLPKEMEEDKLKREEEKREAEK
SEDTSGGSGLSNLHRTYSQDCSFKNSMYHVGDYVYVEPAEANLQPHIVCIERLWEDSNGE
KWLYGCWFYRPNETFHLATRKFLEKEVFKSDYYNKVTVSKILGKCVVMFVKEYFKLCPEN
FRDEDVYVCESRYSAKTKSFKKIKLWTMPISSVRFVPREVPLPVVRVASVFANTDKIDEE
KHSETLEDTKIGDSILSLEKDKEDVPVDMSNGEPGCHYYEQLCYNDMWLKVGDCVFIKSH
GLVRPRVGRIEKMWVRDGAAYFFGPIFIHPEETEHEPTKMFYKKEVFLSNLEETCPMTCI
LGKCAVLSFKDFLSCRPTEIHENDVLLCESRYNESDKQMKKFKGLKRFSLSAKVVDDEIY
YFRKPIIPQKEPSPLLEKKIQQLEAKFAELEGGEEDIEEIGEEEGEVAEAPTVPQLQTPL
SNELDIMPYTPPQSTPKSIKGSVKKEGSKRKINMSGYILFSSEMRAVIKAQHPDYSFGEL
SRLVGTEWRNLEASKKAEYEERAAKVAEQQERERAAQQQQQNSSPRAGTPVGALMGVVPP
PTPMGMLNPQLTPVAGMIGGYPPVLPPLQGPVDGIVSMGSMPPLHPGVPPPHQLPPGMPG
IPPPGVLGQNVSSMVGAPAPGNPFGQQIGMLGPPGQQAPPPYPGQNPASQQVMQQPTTPM
FVSPPPKTQRLLHSEAYLKYIEGLSADSNSISKWDQTLSARRRDVHFSKEQESRLPTHWL
KSKGAHTTMADALWRLRDLMLRDTLNIRQAYNIENI
NT seq
5151 nt
NT seq
+upstream
nt +downstream
nt
atgaggagattggcttttcgtggtgctggttgtactctgaagaagttggattccatgagc
tcaaagaggcgaagggctacctctccttctagcagtgccagtggaggagattttgatgat
ggtcaccattccacaaacacaccaggtccaagtcggaagcgaagaagactctccaacctc
ccaacagttgatcctattgctgtttgccatgaattatacaacacaatcagagattacaaa
gatgaacaaggaaggcttttatgtgaactgttcattagggctcccaaaagacgaaatcag
ccagattactatgaagtagtttcccagcctattgatttaatgaagatccaacaaaagtta
aaaatggaggaatatgatgatgtgaacgtcttaactgctgacttccaactgctgtttaat
aatgcaaaatcctattataagccagattctcctgaatataaggctgcctgcaaattatgg
gatttatatctacggacaaaaaatgaatttgttcagaagggagaagctgacgaggacgaa
gatgaggatgaaggccatgacaatcaagggactatttctgaaatatcttctccaggttat
ttaaaagaaattcttgaacaacttcttgaagcagtagttgtagctacaaatccatcaggc
caccttattagtgaactttttcagaagcttccctctaaagtgcaatatcctgattattat
gcaataattaaagagcccatagatttgaagaccatcgcccagaggatacagaatggaagt
tataaaagcattcatgcaatgaccaaggatatagatctattagttaaaaatgccaaaact
tataatgaaccaggatctcaagtattcaaggatgctaatgcaataaagaaaatatttaat
atgaaaaaggcagaaattgaacattcagaactaactaaatcaagtctccgagtcaggtat
tgtaagcagaatagaaatatagaaaggactgcaaatctgactgcttccaagctaacaaat
ccttcctcacagggtaaaggcagtgttgttgatgaaagaaattcttctaataaatattac
cgtaacaaaagagctgtccaaggtgatcgtttatcagcaataaccatgacactgcaatat
ggatctgaaagtgatgaagatgctgttttagctgctgctgcccgttatgaagaaggagaa
tctgaagctgaaagcattgcttcatttatggatatatccaatcctctctatcaactttat
gatacagttagaaactgccgaaacaaccagggtcaacttatatcggaacccttttttcat
ttaccctcaaagaaaaaatatcctgattattatcaacaaatcaaaatgcctatttcgttg
cagcagatcagaacaaaactgaagaatcacgaatatgaaaccctcgaccatttggagtgc
gatttaaacctgatgtttgaaaatgcaaagcgttataatgttccaaactcagccatttat
aagagagttttgaaactgcaacaggttatgcaggcaaagaagaaagagctagctagaaga
gatgaaattgaggatggagatagtatgatatcttctgccacatcagatgctgggagttca
aaaagaaaaagtaagaagaatataaagaaacaacgaatgaaaatcttatacaatgttgtt
cttgaagcaagagaacctggaacaggccgaaggctgtgtgagctgtttatggtgaaacct
tccaaaaaagactatccagattattacaaaatcattttggagccaatggatttaaaaata
atagaacataatatccgtagtgacaaatatgctggagaggaagctatgatagaagatatg
aggttaatgtttcgaaatgcgaggcattataatgaagaaggctcacaggtttacaatgat
gctcatattttggagaaaattcttaaagaaaaaagaaaagaattgggacctctgcttgaa
gatgatgaaattgcttcccctaaattaaagttaagtagaaaaactggcatctctcctaaa
aaatcaaaatatatgactccaatgcaacagaagcttaatgaagtatacgaagctgtgaag
aactatacagataaaagaggtagaagactcagtgccatttttctacgacttccatcgcgg
tcagagcttcctgattattatctgacaattaaaaagccagttgatatggagaaaatcaga
agtcacatgatggccaacaaatatcaggatattgattctatggttgaagattttgtaatg
atgtttaataatgcctgcacttacaatgaaccagaatccttgatttacaaagatgcactt
gtgctacataaagttttgcttgagactagaagagatatagaaggggatgaagattctcat
gtcccaaatgtgactctgctaatccaagaacttatacataacctttttgtctctgtaatg
agtcaccaggatgatgaggggaggtgctatagtgactctttagctgaaattcctgctgtt
gaccccagtttcccaaacaaacctcctttgacttttgatatcatacggagaaatgtagag
aataaccgctatagaaggttggatttgttccaagaacatatgtttgaagtgctggaacgt
gcaaggagaatgaaccggacggattcagagatttatgaggatgctgtagaacttcagcag
ttctttatcaaaatccgtgatgaactctgcaaaaatggtgagatcttgttatcaccagcc
cttagctacactactaaacatctacataatgatgtagaaaaagagaagaaagaaaaactt
ccaaaagaaatggaagaggacaaacttaaaagagaagaggagaagagagaagctgaaaag
agtgaagatacttctggaggatcaggattatctaatttacacagaacatacagccaagat
tgcagctttaagaacagcatgtaccatgttggagactatgtatatgttgaacctgcagaa
gctaatttacagccccatatagtctgcatagaacgattgtgggaagattcaaacggggaa
aaatggttatacggctgctggttttatcgacctaatgaaacattccatcttgccaccaga
aaatttttggagaaggaggtgtttaaaagcgattattacaacaaagttacagtgagcaaa
attctaggcaaatgtgtggttatgtttgttaaggaatattttaagctatgtccagaaaac
ttcagagatgaagatgtctatgtttgtgaatcacgttattccgcaaagacaaagtctttt
aagaaaattaaattgtggactatgccaattagttctgtacgatttgtccctcgagaagtg
cccttacctgtggttcgtgttgcatcagtgtttgctaatacagacaaaattgacgaagaa
aagcattctgaaacattggaggataccaaaattggagatagtattcttagtcttgaaaag
gataaggaagatgttccagttgacatgtcaaacggagaacctggctgtcactactatgaa
cagctttgttacaatgacatgtggttaaaagttggagattgtgtctttataaaatcgcat
gggttagtccgaccaagggttggcagaatagaaaaaatgtgggttagagatggagctgcc
tatttctttggtccaatttttattcacccagaagaaacagaacatgagccaactaaaatg
ttttataagaaggaggtatttttgagtaacttggaagagacttgcccgatgacgtgcatt
ctgggaaagtgtgctgtgctgtctttcaaagactttctttcctgtagaccaactgaaatc
catgaaaatgatgttcttctctgtgaaagtcgctataatgaaagtgacaaacagatgaaa
aaattcaagggactaaaaagattttctttgtctgctaaggtagtagatgatgaaatttat
tatttcaggaaacccattattccacaaaaggagccatctccacttttagagaaaaaaatt
cagcagctagaagcaaagtttgctgagctagaaggtggagaagaggatattgaagagatt
ggggaagaggaaggtgaagttgcagaagcaccaacagtacctcaactgcagactccactg
tccaatgaattggatataatgccatatactccaccacagtccactccgaagtctatcaaa
ggcagtgtaaaaaaggaaggctctaaaaggaagatcaatatgagtggatacatcctgttt
agcagtgagatgagagctgttattaaagctcagcatccagattattcctttggagaactc
agcagactggttggaacagagtggagaaatctggaagcctccaagaaagcagagtatgaa
gagcgggcagctaaggttgccgagcagcaggagagagaacgagcagcacagcaacagcag
cagaattcttccccccgggcaggcactcctgtcggggctcttatgggggtggtgccgcca
ccaacaccaatggggatgctcaatccgcagttgacacctgttgcaggcatgataggtggc
tatccaccagtgctgccacctttacaaggcccagttgatggcattgttagcatgggcagc
atgccgccacttcaccctggggtgcctccaccccatcaacttccaccaggcatgccaggc
atcccaccaccgggtgttctagggcaaaacgtttcctccatggtaggagccccagcacca
ggaaatccatttgggcagcagataggtatgcttggtcccccaggtcaacaagcaccacct
ccctatcctggtcaaaacccagcatctcaacaggtcatgcagcagcctacaacacctatg
tttgtctctccgccaccaaagacacagaggcttctccactcagaagcgtatctgaaatat
attgaaggtcttagtgctgattcaaatagtattagcaagtgggaccagaccctttcagca
cgaagacgtgatgtccatttctcaaaagagcaagaaagtcgtcttcctacacactggttg
aaaagcaaaggggctcataccacaatggcagatgcactctggcggcttagagacttgatg
ttgagagatacacttaatatccgccaggcatacaacatagaaaatatttaa
DBGET
integrated database retrieval system
