Notechis scutatus (mainland tiger snake): 113422725
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Entry
113422725 CDS
T09026
Symbol
PRPF40B
Name
(RefSeq) pre-mRNA-processing factor 40 homolog B isoform X1
KO
K12821
pre-mRNA-processing factor 40
Organism
nss
Notechis scutatus (mainland tiger snake)
Pathway
nss03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
nss00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
113422725 (PRPF40B)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
nss03041
]
113422725 (PRPF40B)
Spliceosome [BR:
nss03041
]
Complex A
U1 snRNP components
U1 related factors
113422725 (PRPF40B)
Complex B
113422725 (PRPF40B)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
FF
WW
WW_TCERG1
Glyco_hyd_101C
DUF4936
SelB-wing_2
PT26-6P_helical
DUF6887
Motif
Other DBs
NCBI-GeneID:
113422725
NCBI-ProteinID:
XP_026539632
UniProt:
A0A6J1V8M7
LinkDB
All DBs
Position
Unknown
AA seq
889 aa
AA seq
DB search
MSTPDSSSPGQPAPFPSAPRPPPPILPPPFMPPPGIPPPFPPMGLPPMGPRPPPMPPMPP
GMMPPPPMIPPMPGPPPLGQMPTMVPPMLPGMIMPGVPAGPVPVSGGGAAPVTDPSNTTV
TQAAPVIPNPLTAAMQQNVILGGSPVLDTGRKKPAWSEHKAPDGRIYYYNAETKQSSWEK
PDELKSKAEILLSHCPWREYRSETGKSYYYNTQSKESRWTRPRELDDIEALIKEEEEEAE
RPQLPQQSEAQPLSGPASPTPSSAATSDTEGTGGVEETPGTEGVPAAVEEEVTSSCDPLQ
RDEEDRGSAWSNKEEAKQAFKELLKEKGVPASASWEQAMKLISSEPRFSALPKLSEKKQA
FNAYKAQRDKEEKEEARLRAKEAKEELQRFLEEHNKMNSTTRYRKAEQMFGELEVWALVP
ERDRKEIYDDVLFFLAKKEKEHAKQLRKRNIQALKSILDSMSRVSFQTTWSEAQQYLMDN
PSFAEDEDLQTQPGLLPTFPLSDMDKEDALICFEEHIRTLEREEEEERERGRLRERRQQR
KNREAFQAFLDELHENGRLHSMSTWMELYPSLSTDRRFANMLGQPGSTPLDLFKFYVEDL
KARFHDEKKIIKDILKDRSFSVEVNTTFEDFAHVISFDKRAATLDAGNIKLTFNSLLEKA
EAREREREKEETRKMRRKEAAFKSMLRLAAPPLEPNTAWDEVREQFVNNIAFEQITLESE
RIRLFREFLQLLESECQHFHTKAKKHAKKPKKHHRKHSASGSESGSDHPHRAAKRKKRNH
SESAGSAGASSSPDSEHSPRRAKRQKKKSKKKRHKSNSPESEAEHKKEPSRAEEWERGKA
PLRPEGRGHSPPRGTRRERSGWDTSESEELSEGELERRRRTLLQQLGDQ
NT seq
2670 nt
NT seq
+upstream
nt +downstream
nt
atgtcaactccagattcaagcagtcctgggcagccagctccttttccttctgccccacgg
ccgccaccaccaattctaccccctccatttatgcctcctcctgggatcccaccaccattt
ccacccatgggattgcccccaatgggaccacggccacctcctatgcctcctatgccccct
ggcatgatgccacctccccctatgattccacctatgcctggaccaccgcccctgggtcag
atgcccacaatggtgccaccgatgctgcctgggatgatcatgccaggggtgccagctggg
cctgttcctgtttctggaggaggagcagctcctgttactgacccatccaataccacagtg
acccaagcagcacccgtgatccccaaccccctgacagctgcaatgcaacaaaatgtaatt
cttggtggctctccagtgctggatacaggacgaaagaagccagcatggagtgagcataaa
gcccctgatgggcggatctattattataacgctgaaaccaaacaatcaagttgggaaaag
ccagatgaactcaagtctaaggcagagatcttgctgtcacactgtccttggcgtgagtat
cgctcagaaaccgggaaatcctattactacaatactcagagcaaggagtcacgctggacc
aggccacgagagctggatgacattgaagcattgatcaaggaggaagaggaggaagcagag
aggccacagctacctcagcaatcagaggcccaaccattgtcaggccctgccagtcccacc
ccgtcttccgcggccacctcagacacggaaggcactgggggtgttgaagagaccccaggg
actgagggagtcccagcggctgttgaggaggaggtcacaagcagttgtgatcccctgcag
agagatgaagaagatcgtggcagtgcctggagcaacaaagaggaagccaaacaagctttt
aaggagctgctcaaagagaagggcgttccagctagtgcatcctgggaacaggccatgaag
cttataagcagtgaaccccgtttcagtgctttgcccaagctgagtgagaagaagcaggca
ttcaatgcctacaaggctcaacgggacaaggaagaaaaagaagaggcccggctgcgggcc
aaggaggcaaaggaagaactgcagcgcttcttggaagaacacaacaaaatgaattctacc
acccgctacagaaaagctgagcaaatgtttggtgagctagaagtgtgggctctggtgcct
gaaagggatcgcaaggagatctatgatgacgttcttttttttctggccaagaaagagaag
gaacacgccaagcagctccgcaaaaggaacattcaagcgctgaagagtatccttgatagc
atgagccgtgtcagcttccagaccacttggtctgaagcccagcagtatctaatggacaac
cccagctttgccgaagacgaagacttgcaaactcagcctggcctgctcccaactttccct
ctttcagacatggacaaggaggatgccttaatctgctttgaggaacacatccggacgttg
gagagggaggaagaggaggagcgtgaacggggtcgattacgggagaggcgtcagcagagg
aagaacagggaagccttccaggccttcttggacgagcttcacgaaaacgggcgccttcac
tccatgtccacttggatggagctgtatccctccctcagcaccgaccgacgctttgccaac
atgttgggccagcctggctccaccccgctcgatctctttaaattctacgttgaagatctg
aaggcccggttccacgacgaaaaaaagataatcaaggatattctcaaggaccggagcttc
agtgtagaagtaaatacaacctttgaggacttcgctcatgtcatcagttttgacaagcgt
gctgctacgctggatgctggcaacataaagttaactttcaacagcctgctggaaaaggct
gaggcacgggagcgtgaacgagaaaaggaggaaacccggaagatgcggcggaaggaggcc
gccttcaagagcatgttgcgtctggcagctcctcccctggagcccaataccgcctgggat
gaggtcagagagcagtttgtcaacaatattgcgtttgagcagatcacactcgaatcggaa
cggatccgcctctttcgtgaattcctgcagttgctggagagtgagtgccagcatttccac
acgaaggccaagaagcatgccaagaagccaaagaaacatcatcgcaagcactctgcctcg
ggctcagaatcgggctcagatcatccccaccgagcagccaagcggaagaaacgaaaccac
tcagaatccgcaggttccgcgggggcctcatcttcacctgactcagagcacagccccagg
cgtgccaagaggcagaagaagaagagcaagaagaaacgccacaagtcgaacagccctgaa
agcgaagctgagcacaagaaggagccaagccgggcggaagagtgggagcgagggaaggcg
cctctgcgacctgaggggaggggccactcccctccccggggcactcggagggagcggagt
ggttgggacacctcagagagcgaggagctgagcgaaggggagctggaacgtcggcgtcgg
actctgctgcagcaactgggtgaccagtaa
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integrated database retrieval system
