KEGG   Notechis scutatus (mainland tiger snake): 113422754
Entry
113422754         CDS       T09026                                 
Name
(RefSeq) U6 snRNA-associated Sm-like protein LSm6
  KO
K12625  U6 snRNA-associated Sm-like protein LSm6
Organism
nss  Notechis scutatus (mainland tiger snake)
Pathway
nss03018  RNA degradation
nss03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:nss00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    113422754
  09123 Folding, sorting and degradation
   03018 RNA degradation
    113422754
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:nss03019]
    113422754
   03041 Spliceosome [BR:nss03041]
    113422754
Messenger RNA biogenesis [BR:nss03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    P-body specific factors
     113422754
  mRNA degradation factors
   5'-3' decay
    Lsm complex
     113422754
Spliceosome [BR:nss03041]
 Complex B
  U4/U6.U5 tri-snRNP components
   LSm proteins
    113422754
SSDB
Motif
Pfam: LSM SM-ATX
Other DBs
NCBI-GeneID: 113422754
NCBI-ProteinID: XP_026539671
Ensembl: ENSNSUG00000018221
UniProt: A0A6J1U2K9
LinkDB
Position
Unknown
AA seq 80 aa
MSLRKQTPSDFLKQIIGRPVVVKLNSGVDYRGVLACLDGYMNIALEQTEEYVNGQLKNKY
GDAFIRGNNVLYISTQKRRM
NT seq 243 nt   +upstreamnt  +downstreamnt
atgagcctacgaaaacaaactccaagtgatttcttgaagcaaatcataggaagaccagtt
gttgtaaaattaaattctggagttgattaccgaggtgtactagcctgcttggatggctac
atgaatattgctctggaacagacagaagagtatgtaaatggacaattgaaaaataaatat
ggagatgccttcatcagaggaaataatgtgttatatataagtacacagaagaggagaatg
tga

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