Notechis scutatus (mainland tiger snake): 113422760
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Entry
113422760 CDS
T09026
Symbol
PDGFRA
Name
(RefSeq) platelet-derived growth factor receptor alpha
KO
K04363
platelet-derived growth factor receptor alpha [EC:
2.7.10.1
]
Organism
nss
Notechis scutatus (mainland tiger snake)
Pathway
nss04010
MAPK signaling pathway
nss04020
Calcium signaling pathway
nss04144
Endocytosis
nss04510
Focal adhesion
nss04540
Gap junction
nss04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
nss00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
113422760 (PDGFRA)
04020 Calcium signaling pathway
113422760 (PDGFRA)
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
113422760 (PDGFRA)
09144 Cellular community - eukaryotes
04510 Focal adhesion
113422760 (PDGFRA)
04540 Gap junction
113422760 (PDGFRA)
09142 Cell motility
04810 Regulation of actin cytoskeleton
113422760 (PDGFRA)
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
nss01001
]
113422760 (PDGFRA)
09183 Protein families: signaling and cellular processes
04090 CD molecules [BR:
nss04090
]
113422760 (PDGFRA)
Enzymes [BR:
nss01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.10 Protein-tyrosine kinases
2.7.10.1 receptor protein-tyrosine kinase
113422760 (PDGFRA)
Protein kinases [BR:
nss01001
]
Receptor tyrosine kinases (RTK)
PDGFR family [OT]
113422760 (PDGFRA)
CD molecules [BR:
nss04090
]
Proteins
113422760 (PDGFRA)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PK_Tyr_Ser-Thr
Pkinase
Ig_3
I-set
ig
Ig_2
VEGFR-1-like_Ig-like
VEGFR1-3_N_Ig-like
V-set
C1-set
Motif
Other DBs
NCBI-GeneID:
113422760
NCBI-ProteinID:
XP_026539677
Ensembl:
ENSNSUG00000018227
UniProt:
A0A6J1V8S4
LinkDB
All DBs
Position
Unknown
AA seq
1085 aa
AA seq
DB search
MGPSRKEVLILGYLLAGSCIISCQSLLPTILPNEEQMVVQLNGPFTLKCSGDSEVSWQHP
IPEGNHSITIRNEENNSGLFVTVLEVANASASLTGLYICYYNHSQEEDGEVEGKEIYIFV
PDSAVPFVPTSPEDSFIVASEEDNSSIIPCRTTDPNTQVTLMNREGKILYASYDNRLGFI
GNFSLGSYICKTTVKAVEFESGEFFIYVYKAPSYLHVDIESPKTVYKTGETITVTCVVLD
NEVVNLEWNYPGKVKNKGIITLDDIKVPTQKLVYNLTIPDASVKDSGDYECAVRHVTKDF
KKMERIAIYVHDKGFIHLEPHFKPTEAVNLHEVKNFVIFADAYPEPKLFWLKDNVTLMEN
LTEIVTSSKQIQETRYQSVLKLIRAKEEDSGYYTLIAQNEDEIQRYTFSLLIQVPALIRD
LVDNHHGSSGQTVKCLAEGTPLPDVEWLVCKDIKKCNNDTSWTLLTNNISDVTVETSLNE
RNMVASQVTFQKVEEIMAVRCMAKNDLRTVTRELKLVAPTLRSELTVAAAVLVLLVIVII
ALIVLVIIWKQKPRYEIRWRVIESISPDGHEYIYVDPMQLPYDSRWEFPRDGLVLGRILG
SGAFGKVVEGTAYGLSRSQPVMKVAVKMLKPTARSSEKQALMSELKIMTHLGPHLNIVNL
LGACTKSGPIYIITEYCFYGDLVNYLHKNRDNFLSRHPEKTKMDLDIFGINSADESTRSY
VILSFENNGEYMDMKQAEATQYVPMLERKDRSKYSDIQRSLYDRPASYKKKSILDGKNLL
SDDNSEGLSLLDLLSFTYQVARGMEFLASKNCVHRDLAARNVLLAQGKIVKICDFGLARD
IMHDSNYVSKGSTFLPVKWMAPESIFDNLYTTLSDVWSYGILLWEIFSLGGTPYPGMMVD
STFYNKIKSGYRMTKPDHATSEVYDIMMKCWNSEPEKRPSFYHLSEIVESLLPGEYKKSY
DRIHLDFLKSDHPAVTRMRVDCDNPYIGVTYKNEDKLKDRESGFDEQRLSADSGYIIPLP
DIDPVSEDELGKRNRHSSQTSEESAIETGSSSSTFVKREDETIDDMDIIDDIGMDSSELV
EDSFL
NT seq
3258 nt
NT seq
+upstream
nt +downstream
nt
atgggaccttcccgaaaggaagtcttgatcttgggctatctccttgcagggtcatgcatc
atctcctgccagagtttgcttcccactattcttccaaacgaagagcaaatggtcgtgcag
ctgaatggccccttcacgctgaagtgttctggagacagcgaagtcagctggcagcatcct
atcccggaaggcaaccattccataaccatcaggaatgaagagaacaacagtggccttttt
gtgaccgtccttgaagtggcaaacgcttcggcttctctcaccggattatacatttgttat
tataatcattctcaagaggaagatggcgaggtggaggggaaagagatctacatttttgtg
ccagattcagctgttccctttgtgccgacctccccagaagattcgttcattgttgccagc
gaggaagacaattcttcaattatcccctgtcgcacaactgatcctaacactcaggtcacc
ctgatgaacagagaaggaaaaattctgtatgcctcttatgacaacaggctgggcttcatt
gggaacttctctttggggtcctacatatgcaagacaacagtcaaagcagtcgaattcgag
tctggagaatttttcatctacgtttacaaagctccatcataccttcatgttgacatagag
tccccgaagactgtatataaaacaggagaaactattactgttacttgtgtggtcttggat
aacgaagtggtgaacctagagtggaattatccagggaaagtgaagaataaaggaataatt
accctcgatgacatcaaggttccaacgcagaagctggtttataatttaaccattccagat
gcatcagtgaaggacagtggagattatgagtgtgctgtccgacatgtgaccaaagatttc
aagaaaatggaaaggatagccatctatgttcatgataaagggttcattcatttggagccc
catttcaagcccacagaagctgtcaatctacacgaagtcaaaaactttgtaatttttgcc
gatgcatacccagagccaaaattgttttggctgaaggacaatgtcactctgatggagaat
ctcacggagattgtgaccagttccaagcaaatccaagaaacaagatatcagagtgtatta
aaattaattcgtgccaaggaagaagacagcggatattatacactcatagcacagaatgag
gatgaaatccaaagatacactttctctctgctcatacaagttccagctttaattcgggac
ctggtagataatcaccatggctcttctgggcagacagtcaaatgtttggcagaaggcaca
cccttgcccgatgtggaatggctggtttgcaaggacattaagaaatgcaacaatgacacc
tcatggaccctcctgaccaacaatatttctgatgtcacggtggagaccagtctcaatgaa
aggaacatggtagctagccaggtgacgtttcagaaggtggaagaaataatggccgttcga
tgtatggcaaagaatgaccttcgtaccgttacaagggaactaaagcttgtggctcccacg
ttaagatcggaactcactgtggctgctgctgtcctcgtcctccttgtgattgtaataatt
gccctgattgtcttggtaatcatatggaaacagaaacccagatatgagatcagatggaga
gttattgagtctatcagccctgatggccatgagtacatctatgtggaccctatgcaattg
ccctacgattcgagatgggaattccctagagatggactagtgctaggtcgaatccttggt
tcgggagcttttgggaaagtagtcgaaggaacagcctacggattaagccgatcgcagcca
gtgatgaaagtagctgtgaaaatgttgaaaccaactgcaagatccagcgaaaaacaggca
ctcatgtctgaattgaagataatgactcatcttggcccacacttgaacattgtcaacctc
ttaggagcttgtacaaaatcaggtccaatatacatcataacagaatattgtttttatgga
gatttggtgaactacctccacaaaaatagggataactttctgagtcgacatcccgaaaaa
acaaaaatggacctggacatctttggcataaactctgcagatgagagcactagaagctat
gtcatcctatcctttgaaaataatggtgaatatatggatatgaaacaagcagaggcaact
cagtacgtgcccatgttagaaagaaaagacaggtctaaatattctgacatccaaagatct
ttgtacgatcggcctgcttcatataagaaaaaatccatattagacgggaagaatctgctg
tctgacgacaattcagaaggcctcagtttgctggatctgctgagcttcacctaccaggta
gctcggggaatggagttcctggcttccaaaaattgcgtgcaccgtgatctggcagcacga
aacgtcctcttagcccaaggaaaaattgtgaagatctgtgactttggactagcaagagac
atcatgcatgattccaactatgtctccaaaggcagtacctttcttccagtgaagtggatg
gcccctgaaagcatttttgacaacctgtataccacattaagtgatgtctggtcctatggc
attctattatgggaaatattttctcttggtgggaccccataccctggcatgatggttgac
tccaccttctataataaaataaaaagtggctatcggatgacaaaaccagaccatgctacc
tctgaggtgtatgacatcatgatgaaatgctggaatagtgaacctgaaaagagaccttct
ttttaccacttgagtgaaatagttgagagtctgctgcctggtgaatacaagaagagttat
gatagaattcacttggacttcttaaagagcgaccatcctgccgtcacacgcatgagagtg
gactgcgacaatccatatattggtgtcacttacaagaatgaggacaaactgaaggacagg
gagagtggattcgatgaacaaagactcagtgcagacagtggctatataattccactgccc
gatattgaccctgtatccgaagatgaactgggaaaaaggaacaggcacagttctcagaca
tctgaagaaagcgccatcgaaaccggatccagcagttcgacgtttgtgaagcgagaagac
gaaaccatcgatgatatggacatcatcgatgatattggcatggattcctcagaactagtt
gaggacagcttcctgtaa
DBGET
integrated database retrieval system
