Notechis scutatus (mainland tiger snake): 113422792
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Entry
113422792 CDS
T09026
Symbol
CHD8
Name
(RefSeq) chromodomain-helicase-DNA-binding protein 8 isoform X1
KO
K04494
chromodomain helicase DNA binding protein 8 [EC:5.6.2.-]
Organism
nss
Notechis scutatus (mainland tiger snake)
Pathway
nss04310
Wnt signaling pathway
Brite
KEGG Orthology (KO) [BR:
nss00001
]
09130 Environmental Information Processing
09132 Signal transduction
04310 Wnt signaling pathway
113422792 (CHD8)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
nss03036
]
113422792 (CHD8)
Chromosome and associated proteins [BR:
nss03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
113422792 (CHD8)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF2-rel_dom
HTH_CHD6-9
Helicase_C
Chromo
BRK
ResIII
DEAD
HDA2-3
HTH_Hrp3
MUN
Myb_DNA-bind_7
Motif
Other DBs
NCBI-GeneID:
113422792
NCBI-ProteinID:
XP_026539730
Ensembl:
ENSNSUG00000018474
UniProt:
A0A6J1VAK6
LinkDB
All DBs
Position
Unknown
AA seq
2480 aa
AA seq
DB search
MADPIMDLFDDPNLFGLDSLTDESFNQGTPDPIEEALGLSGATLDSLAGGSKDQQVTPQP
EPSQTEALPLPDTRPESVTEPPQQEQPGLLQVPQDQEVLSQGNPFMGVSSTTTTSTVAPS
SSAGGQQAAVTPPAPKIVILKAPAGSSMTGAHVAQIQAQPIGAANGGKVTFAKVLTGTPL
RPGVSIVSGNAVLATKVSPGAGTPATLHRLVQPGRPVKQLVLQPMKSQAGANTGTTPLKP
AVTLTSAPAQVSTQFFQGESKRITLVLQQPPTGGNAPGQRQVVLGSLPGKIVLQGNQLAA
LSQAKGVPGQPAKVVTIQLQVQQPGQQQQSSGQPGTQKIQLLQPTTAGASGQQAPLSVPA
VQQAQVVGGSGQRVTVPVKVVLQPQASSSQGSSSGLSVVKVLSSSEVAALPSSSGTTRSG
SDESRKLEHQKKQEKANRIVAEAIARARARGEQNIPRVLNEDELPSVRPEETGERKRRRK
GGGERIPKEDRPRKGRGQGGSGKSKGRGKPSTITPVVGKKRKRNASSDNSDAEVMPAQSP
REEEEASIQKRRSNRQVKRKKYTEDLDIKITDDEDDEELDVTGPIKTEHPPAPEPPAPDP
IPEGETLPSMQFFVENPSEEDAAIVDKVLSMRVVKKELPNGQFTEAEEFFVKYKNYSYLH
CEWATIAQLEKDKRIHQKLKRFKTKMAQMRHFFHEDEEPFNPDYVEVDRILDESHSIDKD
NGEPVIYYLVKWCSLPYEDSTWELKEDVDEGKVQEFKRIQSRHPELKRVARPQAGSWKKL
ELSHEYKNGNQLREYQLEGVNWLLFNWYNRQNCILADEMGLGKTIQSIAFLEEVYNVGIR
GPFLVIAPLSTITNWEREFNTWTEMNTIVYHGSLASRQMIQQYEMYCKDSRGRLIPGAYK
FDALITTFEMILSDCPELREIEWRCVIIDEAHRLKNRNCKLLDSLKHMDLEHKVLLTGTP
LQNTVEELFSLLHFLEPSQFPSESEFLKDFGDLKTEEQVQKLQAILKPMMLRRLKEDVEK
NLAPKQETIIEVELTNIQKKYYRAILEKNFNFLSKGAGHSNMPNLLNTMMELRKCCNHPY
LINGAEEKILTEFRDSCHHHVPHDFPLQAMVRSSGKLVLIDKLLPKLKAGGHKVLIFSQM
VRCLDILEDYLIQKRYLYERIDGRVRGNLRQAAIDRFSKPDSDRFVFLLCTRAGGLGINL
TAADTCIIFDSDWNPQNDLQAQARCHRIGQSKAVKVYRLITRNSYEREMFDKASLKLGLD
KAVLQSMSGREGSITGIQQFSKKEIEDLLRKGAYAAIMEEDDEGSKFCEEDIDQILLRRT
TTITIESEGKGSTFAKASFVASENRTDIALDDPNFWQKWAKKADLDLDLLNSKNNLVIDT
PRIRKQTRHFSTLKDDDLVEFSDLESDDDDRPRSRRHDRHHHPLHHSYGRTDCFQVEKQL
LVYGWGRWREILSHGRFKRRMSERDVETICRAILVYCLMHYRGDENIKGFIWDLISPVEN
GKAKELQNHSAPALSSLPVPRAGLSIPVPRGRKGKKVKSQTTFDLQKAEWIHKYNPDTLF
QDEGYKKHLKHQCNKVLLRVRMLYYLRQEVIGDQAEKVLAGAASSETDIWFPLVDQAEVP
TGWWDTEADKSLLLGVFKHGYEKYNTMRADPALCFLEKAGRPDDKAIAAEHRPDVGEGVD
FDKDCEDPEYKPVGAPAKEHDEEGEALMMMDEDISVVDGEEGQPGNLFWPPASALTARLR
RLITAFQRSYKREQLKMEAAERGDRRRRRCEAAFKLKEMVRREKQQRWTRREQSDFYRVV
STFGVEYDPDTMRFHWSRFRTLARLDKKTDESLAKYFHGFVAMCRQVCRLPPAASDESPD
PTLFIEPITEERASRTLYRIDLLRRLREQVLCHPLLEERLALCQPAGPEMPPWWQCGRHD
GELLRGVARHGLSQTDTTIMQDPDFSFLAARLSHLHSRAGGTGTPPLPPPGPAQPTGLPL
PGVSMAAVPSPLLLAPPLNEPPAPPPQPLTLPPKPESAEDSDSELDLSKISASSSCSSSS
ACSDDSEGEEASCGGKLFEEEESSLLSLPTSHEGNSPQPSASDLLLQERQRAHEWPKDRV
LINRIDLVCQAVLSGKWPSPQQGQVVTCVGQGEGLPHLHGEYTTSPIPHICPLASQEEGT
ASFSRLRHGGQEKEFTVQIKDEEGIKLTFQKHKLVPNGTVRNRPALTQKKSSKKMVELEL
QCLEALRGPDIDLEAHIPVVNKTDGTLLVGDAAPRRADLEVWLQAHPEYAVDPRFLAYME
ERRKHRWPRFPKPVPIEPSCLVGLERMQVAGISANGKKGFLPDPTMNRLLPGAVGADNAQ
KRGCQTPMEFSNMMALMGAGRVQLGTAGPLSLHHHAHFQTTPAHGSALQYMPFPAAAAAA
TAATTSGTLLHPGLGHAGYATAPLHLGHPQRVDEDEEEDEMDDLSQGYASSERDFSLLDD
DPMMPANSDSSDKGEEEGED
NT seq
7443 nt
NT seq
+upstream
nt +downstream
nt
atggctgaccccatcatggaccttttcgatgatcctaacctctttggcttggactcattg
actgatgagagctttaaccagggcactccggaccccattgaagaggccttggggctttca
ggggctaccctagactccttagcggggggctccaaagaccagcaggttacccctcaaccg
gagccctcccaaacagaagccttgcccctccctgatacacgaccggagtccgtgactgag
ccgccccagcaagagcaaccaggccttctacaggtccctcaggatcaagaggttctcagc
caaggcaacccattcatgggggtctcatcgaccacgaccacctcaacggttgcaccctct
tcttccgccggaggccagcaagccgccgtgacccctccggcccccaagatcgtcatcttg
aaagcccccgccggaagttccatgaccggtgctcacgtggcccagatccaagctcagccc
attggggcagccaacggaggcaaagtgaccttcgccaaggtcctgacaggaacgcctttg
cgtcccggggtctccatcgtctcaggcaatgctgtgctggccaccaaagtgtcccccgga
gctgggacacccgctaccctccatcggctggtgcaacccggacgtcccgtcaagcagctt
gtcctgcagcccatgaagagccaagcgggagcgaacacggggactactccactgaaacct
gccgtgaccctgacctcggctccagctcaggtgagcacacagttcttccagggtgagtcc
aaacgtattaccttggttctccagcaacccccgactggcggaaatgccccgggacagcgg
caagttgttttaggcagcttgcctggcaagattgtccttcaagggaatcagctggccgcc
ctaagccaggccaaaggagtgccagggcaaccggccaaggtggtgaccatccagctacag
gttcagcagccgggacagcaacagcaatccagtggccagccggggactcagaagatccag
ctcttgcagccaaccacggccggcgcctccggccagcaggcccctttgagcgtaccagca
gtccaacaagcccaagtggttgggggctcaggtcagagggtgacggtcccagtcaaagtc
gtgctgcagccacaggccagctcgtcccaaggcagctcctcgggactctcagtggtaaag
gtgctgagcagcagcgaagtggccgccctcccatcttccagcggcacaacacggagtggc
tcagacgaatcccgcaagctggagcatcaaaagaagcaggagaaggccaaccggatcgtg
gcagaggccatcgctcgagcccgagcccggggcgagcagaacatcccccgggtgctgaac
gaggatgagctgcccagcgttcggccagaagagacaggagaacgcaagcgacgtcggaag
ggcgggggcgagcgcatccccaaagaggaccggccacgcaagggcagaggccagggggga
tccggcaagagcaaaggccgagggaaacccagcacgatcacgccagttgtggggaagaaa
cggaaacggaacgcttcttcggacaattcagatgccgaggtgatgccagcccagtctccg
cgtgaggaggaagaggccagcattcagaaacgacgttcaaaccgtcaggtgaagcgaaag
aaatacacagaagatctggacatcaagatcacggatgatgaagatgacgaggagctggat
gtgaccgggcccattaagactgaacatcccccagctccagaaccgcctgctccagacccc
atccctgaaggagagacattgccatcaatgcagttctttgtggaaaacccaagtgaagag
gatgctgccatcgtagacaaggtcctgtccatgcgcgtggtgaagaaggagctacccaat
gggcaattcacagaagcggaagaattctttgtgaaatacaaaaactactcttacttgcac
tgtgaatgggccaccattgctcaactggagaaggacaagaggatccaccagaagctcaaa
cggtttaagaccaaaatggctcagatgaggcacttcttccatgaggatgaggagcctttc
aacccagactacgtggaagttgaccgcatcctggatgaatcgcacagcattgacaaggac
aacggggagccggtgatctattatctggtaaagtggtgttcgctcccttatgaagacagt
acatgggaactgaaagaagatgtagacgaaggaaaggtccaagagttcaaacgcatccag
tccaggcaccctgagctcaaacgggtggctcgaccccaggcaggttcctggaaaaagctg
gaactttcccacgaatacaagaacggcaatcagttgcgtgaatatcagctggagggtgta
aactggttgcttttcaactggtacaataggcaaaattgcatcctggccgacgaaatgggg
ttgggtaaaaccatccaatccatcgccttcttggaggaagtgtataacgtgggaatccgg
gggcccttcctggtcatcgcccctctgtccaccatcaccaactgggagcgggaattcaac
acctggaccgagatgaacaccattgtgtaccatggcagcctggcctcccgccagatgatt
caacaatatgagatgtactgtaaggactcccggggtcgtctgatcccaggggcctacaag
tttgatgccctgatcaccacctttgagatgatcctgtcggactgccccgagctgagggag
atcgagtggcgctgtgtgatcatcgatgaagctcaccgcctgaagaaccgcaactgcaaa
ctgctggacagcctcaagcatatggacctggaacacaaagtgttgttgactggcacccct
ctccagaacaccgtggaagaactattcagcctcctgcacttccttgaaccctcccaattc
ccctctgaatcagagttcctcaaggacttcggggacctcaaaactgaggagcaggtgcag
aaactgcaggcgatcctgaagcccatgatgctccggcggttgaaggaggatgttgagaag
aatttggcccccaagcaggaaactatcattgaagtagagctgaccaacatccagaagaag
tactaccgggccatcctagagaagaacttcaacttcctttccaagggagcagggcacagc
aacatgcccaaccttctcaataccatgatggagctacgcaagtgttgcaatcacccctac
ctcatcaatggtgccgaggagaagatcttgactgagtttcgggattcctgccaccaccac
gtgccccatgactttcccctgcaggccatggtgcgttcctctgggaaattggtgctgatc
gataaactgcttcctaaactgaaagctggaggacacaaggtgctgattttttcccagatg
gtccgctgcctcgacatcctggaagactacctcatccaaaagaggtatctctacgagcgt
attgatgggcgggtgcgtggcaatctgcgtcaggccgccatcgaccgctttagcaagcct
gattcggatcgctttgtgttccttctctgcacccgggcgggaggtcttggcatcaacctc
acagctgctgatacctgcataattttcgactcagactggaatcctcaaaatgacttgcag
gcacaggctcgctgccaccgcatcggacagagcaaggccgtgaaagtttaccgcctcatc
actcggaattcctatgagcgggaaatgtttgacaaagccagcctcaagctgggtctggac
aaggctgtcctgcagtccatgagtgggcgagaagggagcatcactgggattcagcagttt
tcgaagaaggagattgaggatttgctacgcaaaggggcctatgccgccattatggaagag
gatgatgaagggtctaagttctgcgaggaagacattgaccaaatccttcttcgccgcacc
accaccattaccattgagagcgaagggaaaggatccacctttgccaaggcaagttttgtg
gcctctgaaaacaggacagatatcgctttggatgaccccaacttctggcagaaatgggcc
aagaaagcagatttagacctggatctcctgaatagtaagaacaacctggtgatcgacacg
ccccgcatccgcaagcagacccgccacttcagtaccctgaaggatgatgacctggttgag
ttctccgacttggagagtgacgatgatgaccggccacgctcccggcgccacgaccgacac
caccatcccctccaccattcgtacgggcgcaccgactgcttccaggtggagaaacaactg
ctggtctatggctggggccgttggagggagatcctgtcacatggacgtttcaagcggcgg
atgtctgagcgggacgtagagaccatctgccgtgccatcctggtctactgcttgatgcat
tatcggggtgacgagaacatcaaaggattcatctgggacctcatcagcccggttgagaat
ggcaaagcgaaggagcttcagaaccactcggcccctgctctgagctcccttcctgttcct
cgggcaggcctgtccatcccggttccacggggccgcaaggggaagaaagtcaagtctcag
accacgttcgatctccagaaagcagagtggatccacaagtacaacccggacactctcttc
caagacgaaggctacaaaaaacatctcaagcaccagtgcaacaaggtgctgctcagggtc
cgaatgctttattacttgcgtcaggaggtgatcggggaccaggcagagaaagttttggca
ggtgctgcgtccagcgaaactgacatctggtttccactcgtggatcaggcagaagtcccc
acaggctggtgggacacagaagcagacaaatctttgcttcttggggtcttcaaacatggc
tacgagaagtacaacaccatgcgagccgaccctgcgctttgtttcctggagaaagctggc
cgcccggatgacaaggccattgctgctgagcaccgaccggatgtgggagaaggggtggat
tttgacaaggactgtgaggatccagaatataaacccgttggagcccctgccaaggaacat
gatgaggagggcgaagcactaatgatgatggatgaagacatatcggtggtggatggggag
gaaggtcagccagggaatcttttctggcctccagcctctgcgctcactgcccgtttgcgg
cgactcatcacagccttccagcggagctacaagcgcgagcaactgaagatggaggccgca
gagcggggggatcggcggcggcggcgatgcgaggccgccttcaagctgaaggagatggtg
cgtcgagagaagcagcagaggtggacacgccgtgagcagtcggacttctatcgcgtggtt
tccacgtttggggtggaatatgatccagacacgatgcggttccattggagtcggtttcgg
accctcgcccgcttagacaagaagaccgatgagagtctagccaaatattttcacggtttc
gtggccatgtgtcgacaggtgtgccgccttcctcctgctgcaagtgatgagtctccagac
cccaccctcttcattgaacccatcacggaagaacgggcctcccgcaccctgtaccgcatt
gacctcctgcgccgtctgcgggagcaagtgctgtgccatcccctcttagaggagcgcctc
gccctgtgccagcctgctgggcccgagatgccgccatggtggcagtgcgggcgccatgac
ggggagctgctgcggggagtggcccgccatggccttagccaaaccgacaccaccatcatg
caggaccctgacttttctttcctggcggctcggctcagccacctgcatagtcgggcagga
ggcacagggacaccccctcttccacccccagggccagcccagcctacagggctacccctt
ccaggggtcagcatggcggctgttccgtcccccctgctcctcgccccacctttgaatgag
ccacctgctccgccgccacagccgctcaccttgccccccaaacccgaatcggccgaggac
tccgactccgaacttgacctcagtaaaatttctgcttcatcgtcatgttcgtcttcctca
gcttgctccgacgacagtgagggtgaagaggcttcttgtggtgggaaactctttgaagag
gaggaatcctcactgctctctctgcccacttcccacgagggcaactccccgcagcctagt
gcctcggatctgctgctgcaggagcgccaaagggcccatgagtggccaaaggaccgtgtc
ctcatcaaccgtatcgacttggtatgccaggctgtgctgtccggaaagtggccctctccg
caacagggccaggtagtgacctgtgttggccagggagaaggcctgccccacttgcacgga
gaatacaccacttcccccatccctcacatctgccctctggcatcccaagaggaaggcaca
gcttccttcagccgcctccgacacggtggccaagagaaggagtttaccgtgcagatcaaa
gatgaagaaggaatcaaactgactttccaaaagcacaagctggtccctaatggcaccgtt
cgcaatcggcctgctctcacccagaagaaaagtagcaagaaaatggtggagctggaactg
cagtgtctggaagcactgagaggccccgatattgacctggaggctcatatcccagtggtg
aacaaaacagatgggacgctgctggtgggtgacgcggccccccgccgggctgatctcgaa
gtgtggctgcaggcccaccccgagtatgcggtagatcctcgcttcctggcttacatggaa
gaacgccggaagcaccgatggccccggttcccaaaacctgttccaatagagccgagttgt
ctggtaggactggagaggatgcaggtagctggcatttctgccaacggtaaaaagggtttt
cttccagatccgacgatgaatcgccttcttccaggagccgtgggggctgacaatgcacag
aaacgcggttgccagaccccaatggagttttccaacatgatggctctgatgggagccggc
cgggtccaactaggaaccgcgggacccctctctctgcaccatcacgcccacttccaaacc
accccagcccatggctctgccttgcaatacatgccgttccccgccgcagccgctgcggcc
actgctgccaccacctctggcacccttctccacccaggactgggccacgctggctacgcc
acagctcccttgcacctgggccaccctcagcgtgtggatgaagacgaggaagaagacgag
atggacgacttgtctcagggctatgccagctcggaacgggacttttccttgctggacgac
gaccccatgatgccggccaactccgactccagcgacaaaggggaggaggaaggagaagac
tga
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integrated database retrieval system
