Notechis scutatus (mainland tiger snake): 113423060
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Entry
113423060 CDS
T09026
Symbol
NUP62CL
Name
(RefSeq) nucleoporin-62 C-terminal-like protein
KO
K14306
nuclear pore complex protein Nup62
Organism
nss
Notechis scutatus (mainland tiger snake)
Pathway
nss03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
nss00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
113423060 (NUP62CL)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
nss03019
]
113423060 (NUP62CL)
Messenger RNA biogenesis [BR:
nss03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
113423060 (NUP62CL)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Nsp1_C
DUF4164
Nup188_C
Motif
Other DBs
NCBI-GeneID:
113423060
NCBI-ProteinID:
XP_026540079
UniProt:
A0A6J1VJC7
LinkDB
All DBs
Position
Unknown
AA seq
589 aa
AA seq
DB search
MSQFGFGAGGGGGGFSFGTPKTAVGTTSSSAAPAGFSFSSAISAGAGGGTSGAFGFGSPA
PNAGSAPPAAGLFSFATPAASAQASAFSFGMPPASSAAATPAGGVFTLGGNAAKLSLGGS
AATTASPATSGFGLGSSGGLGGSGASGTSVAGTQVAAAAATPPAGFVFGSAATTTPQPAP
AAPAVVGGFSFGGAAQTGAPNFSLGSLGSVPPQTAPPGPTFGIAPASANAAVSTAAASQA
APAFSLGTASTGSGFGVLAPAAVTSTTTPLSFGAKPGGTTVTSVALATTSSSSLLGLSGP
TLFASVAGSSAPAACTTTSLSVGTSSTGAAPTGTLGFGSKMPGVTTAAAATLPTAGAASI
PAAGFLLNLKPLATTSVAASTSTATTTTGMAPPMMTYAQLESLINKWSLELEDQEKHFLQ
QATQVNAWDRTLIENGEKITTLHREVEKVKLDQKRLDQELDFILSQQKELEDLLIPLEES
VKEQSGTIYLQHADEEREKTYKLAENIDAQLKRMAQDLKDIIEHLNTSGGPADNSDPLQQ
ICKILNAHMDSLQWIDQNSALLQRKVEEMSKVCESRRKEQERSFRITFD
NT seq
1770 nt
NT seq
+upstream
nt +downstream
nt
atgagtcagttcggcttcggcgcgggcggcggcggcggcggcttcagtttcgggacgccc
aaaacggcggtcggcaccaccagcagcagcgcagcccccgcgggcttctccttctcctcg
gccatctcggcgggcgcgggcgggggcacaagcggggccttcggcttcggctctcccgcc
ccgaacgccgggagcgccccgcccgccgccgggctcttctccttcgcgacgcccgccgcc
tccgcgcaggcctccgcattcagcttcgggatgcccccggcctcgtccgcggcggctact
cctgcggggggcgttttcacgctggggggcaacgcggccaagctgagcttggggggctcg
gccgctacgacggcctcccccgcgaccagcggcttcgggctgggcagtagcggcggactg
ggcggctccggcgcgagcggcaccagcgtggcgggcacccaggtggcggcggcggcggcg
actccacccgcggggttcgtgtttggctcggcggccacgacgacgccacagccggctccg
gctgcccccgccgtcgtgggaggcttcagctttggcggggcggcccagacaggagctccg
aatttcagcctcggctcgctggggagcgtcccgccgcaaacagcacctcccggcccgact
ttcggaattgctccggcctccgccaacgccgctgtgagcacagcagccgcatcgcaggca
gccccggccttcagcctcgggacagcgtccaccggttctggctttggagtgttggctcca
gcagcggtcacttccaccaccacacccttgtcctttggggctaaacctggaggtaccact
gtcacctcggtggcccttgctactacaagttcctcttccctcctcggcctatcagggccc
acgctgtttgcatctgtagcaggctcttcagctccagctgcctgtaccaccactagcctt
tcagtgggtacctcctcgacaggggcagctcccactgggaccttgggatttggctcaaaa
atgcctggagtgaccacagcagctgctgccactctccccacagctggggctgcttccata
cctgctgcaggattcctcttgaacctgaagccccttgccacaacaagcgtggctgcttcc
acctccactgcaaccaccacaactggcatggctccccccatgatgacttatgcccagctg
gagagcctgattaacaaatggagcctggaactggaggaccaggagaagcacttccttcag
caggctacccaggtcaacgcttgggacaggacattgattgaaaatggagaaaagatcaca
accttacacagagaagtagagaaagtgaagctggatcaaaagaggctggaccaagagctg
gacttcattttgtctcagcaaaaggagctagaagacttgttgataccattggaggaatct
gtgaaggagcagagtggaacaatctatttgcaacatgcagatgaggagcgggaaaagaca
tacaaactggcagagaacatcgatgctcagctgaagcgcatggcccaagatttgaaagat
atcattgaacacctgaacacctctgggggccctgctgacaatagtgaccctcttcagcag
atctgcaaaattctgaatgcacacatggattctttgcagtggattgatcagaactccgcg
ctgctgcagaggaaagtggaggagatgagcaaggtctgcgagagccgccgcaaggagcag
gagcgcagcttccgcatcaccttcgactga
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