Notechis scutatus (mainland tiger snake): 113423099
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Entry
113423099 CDS
T09026
Symbol
ATG16L1
Name
(RefSeq) autophagy-related protein 16-1 isoform X1
KO
K17890
autophagy-related protein 16-1
Organism
nss
Notechis scutatus (mainland tiger snake)
Pathway
nss04136
Autophagy - other
nss04140
Autophagy - animal
nss04621
NOD-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
nss00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
113423099 (ATG16L1)
04136 Autophagy - other
113423099 (ATG16L1)
09150 Organismal Systems
09151 Immune system
04621 NOD-like receptor signaling pathway
113423099 (ATG16L1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
nss04131
]
113423099 (ATG16L1)
03029 Mitochondrial biogenesis [BR:
nss03029
]
113423099 (ATG16L1)
Membrane trafficking [BR:
nss04131
]
Autophagy
Autophagosome formation proteins
Atg12 conjugation proteins
113423099 (ATG16L1)
Others
Specific organelles associated proteins
Auto phagosome
113423099 (ATG16L1)
Mitochondrial biogenesis [BR:
nss03029
]
Mitochondrial quality control factors
Mitophagy factors
Autophagy-related proteins
113423099 (ATG16L1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_WDR5
Beta-prop_WDR3_1st
ATG16
WD40
Beta-prop_THOC3
WD40_Prp19
WD40_WDHD1_1st
WD40_CDC20-Fz
Beta-prop_EML_2
WDR55
Beta-prop_WDR36-Utp21_2nd
Beta-prop_WDR3_2nd
WD40_Gbeta
EIF3I
Beta-prop_WDR36-Utp21_1st
Beta-prop_TEP1_2nd
WD40_MABP1-WDR62_2nd
Beta-prop_CAF1B_HIR1
Beta-prop_EML
Beta-prop_Aladin
Beta-prop_WDR75_1st
WD40_MABP1-WDR62_1st
Beta-prop_TEP1_C
Beta-prop_SCAP
Beta-prop_RIG_2nd
ANAPC4_WD40
Beta-prop_WDR90_POC16_2nd
WDR90_beta-prop_4th
Beta-prop_DCAF4
Beta-prop_EIPR1
NBCH_WD40
eIF2A
WD40_RFWD3
Beta-prop_IFT122_1st
Beta-prop_DCAF12
Beta-prop_IFT140_1st
Beta-prop_HPS5
Beta-prop_ACSF4
Beta-prop_NWD2_C
Beta-prop_VPS8
CCDC93_CC
Beta-prop_Vps41
Beta-prop_WDR19_1st
KASH_CCD
Tricorn_2nd
Beta-prop_SPT8
Fez1
Lipoprotein_6
Tricorn_N
DUF2332
HEF_HK
Motif
Other DBs
NCBI-GeneID:
113423099
NCBI-ProteinID:
XP_026540174
Ensembl:
ENSNSUG00000012019
UniProt:
A0A6J1VJL9
LinkDB
All DBs
Position
Unknown
AA seq
623 aa
AA seq
DB search
MSVGLKTSSFPAWKRHILDELKRRDRLQRQAFEEIILQYNKLLEKSDFHSVLADKLQVEK
YDLPSRHEISPGHDGARNDAHLQEVAQLRIKHQEELTELHKKRGELAQSVIDLNNQIQQK
DKEIQINNVKIAEYLQKISELETECHDLCNKLQDLEQANQTLKDEYDALQITFTALEEKL
RKTTEDNQELVTRWMAEKAQEANRLNAENEKDLRRRQARLQKELAEAAKEPLPIEQDDDI
EVLADETSDPAEDTSPVRAVTRTASKRLSQPPGGLLDSITNIFGLSESPLLGHHSSDTAR
RRSLSSCPIPQDNTDVHPTASREVRLPNTAVCVFDAHDGEVNAVQFSPGSRLLATGGLDR
RVKIWEVLGDKCEFKASLSGSNAGITSVEFDNAGSYLLAASNDYASRIWTVDDHRLRHTL
TGHSGKVLSAKFLLDKARIVSGSHDRTLKLWDLRSKVCIRTVFAGSSCNDLVCTEQCVMS
GHFDKKIRFWDIRTESVVHEVELLGRITALDLNPERTELLTCSRDDLLKIIDLRINAVKH
TFSAPGFKCGSDWTRVVFSPDGNYVAAGSADGSLYIWSVLTGKVERTLSKHHSNPINAVA
WSPSGAHVISVDKGNKAVLWSEF
NT seq
1872 nt
NT seq
+upstream
nt +downstream
nt
atgtctgttgggcttaagacgtcgagcttccccgcctggaagcgacatatcctggatgaa
ctgaagcgtcgagaccggttacaaagacaggcctttgaagagataatcttgcaatataac
aagctcttggagaagtcagattttcattcagtgctggctgacaagctacaagtggaaaag
tatgatttgccaagccggcatgagatcagcccaggacatgatggtgcaagaaatgacgct
catcttcaagaagtagctcaattaaggattaaacatcaagaggaattgacagagctgcac
aagaaacggggcgagttggctcaatctgtgattgacctaaacaatcaaatacagcagaag
gacaaagaaatacaaataaataatgtcaaaattgcagaatatttacagaagatatctgaa
ctggagactgagtgccatgatttgtgcaacaagcttcaagatcttgaacaggctaatcag
actcttaaggatgaatatgatgctctccaaatcacctttactgctcttgaagaaaaatta
agaaaaaccactgaagataaccaagaattggtaacccgttggatggcagaaaaggctcaa
gaagctaatcggctcaatgcagaaaatgagaaagatttaaggagaaggcaagctcggctt
cagaaagaactagcagaagctgctaaagaaccactgccaattgaacaggatgatgatatt
gaagtccttgctgatgaaacctccgatccagctgaggacacatctccagttcgtgctgtc
acacggacagcaagtaagcgactctcccagccccctggaggccttctggattctatcact
aatatctttggtctgtctgagtctccccttttgggacatcactcttctgatactgccagg
aggcgctctttatcctcatgtcctattcctcaagataatactgatgtacatcctactgca
agcagagaggtccgactacccaacacagcagtgtgtgtctttgatgcacatgatggggag
gttaatgcagtccagttcagtcctggttctcgtttattagcaacaggaggcttggaccgt
agggtcaaaatttgggaagtgcttggtgataagtgtgaatttaaagcctcgctatctggc
agtaatgcagggattactagtgtagagtttgataatgctggttcctacttattagcggct
tcaaatgactatgccagtaggatctggacagtggatgatcatcggttacggcacacgctc
acggggcatagtggaaaggttttatcagccaaattccttctggacaaagctcgcattgta
tctgggagtcatgacagaacgctcaagctatgggacctgcgcagcaaagtctgtataaga
acggtgtttgctggctccagctgcaatgatcttgtctgcacagaacaatgtgtaatgagt
ggacactttgataagaaaattcgcttttgggacattagaactgaaagtgtggtacatgaa
gtggaattgctgggaaggattacagctctggatctgaaccctgagagaacagagcttctt
acatgttctcgtgatgatctgttgaaaattattgatctcagaatcaatgctgtcaaacac
acattcagtgctccaggatttaaatgtgggtctgattggactagagttgtattcagccct
gatggaaattatgttgcggctggctcagcagatggatcactttatatatggagtgtgctc
actggaaaagtcgaaaggacactttccaagcatcacagcaatcccatcaatgctgtggca
tggtcaccatctggagcccatgtgatcagtgtggacaaaggaaacaaggctgtgctgtgg
tctgaattttga
DBGET
integrated database retrieval system
