Notechis scutatus (mainland tiger snake): 113423350
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Entry
113423350 CDS
T09026
Symbol
MSH2
Name
(RefSeq) DNA mismatch repair protein Msh2
KO
K08735
DNA mismatch repair protein MSH2
Organism
nss
Notechis scutatus (mainland tiger snake)
Pathway
nss03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
nss00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
113423350 (MSH2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
nss03400
]
113423350 (MSH2)
DNA repair and recombination proteins [BR:
nss03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
113423350 (MSH2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_II
MutS_I
MutS_IV
AAA_27
MCU
Motif
Other DBs
NCBI-GeneID:
113423350
NCBI-ProteinID:
XP_026540490
Ensembl:
ENSNSUG00000016250
UniProt:
A0A6J1VCI3
LinkDB
All DBs
Position
Unknown
AA seq
939 aa
AA seq
DB search
MAASIDACVSAPREGCWPEGWGAENGFIRAVLALPAKPKTTVRFFERGDYYTVHGEDAKL
AATEVFKTRVIIRILGSGAQKLESVALSKMNFEYFLRNLLLIRQYRAEVYKNKAGNKSTK
ETEWYLAYKGSPGNLAQFEDALFSNHDMCSSAGVVAIKLSSVDGQKVVGVGYVDLLSRKL
EVSEFADNDQFSNLEALLIQMGPKECLLPVGETAGDMEKLRQVVQRGGILITDRKKTEFS
TKDAVQDLNRLLQSGKKDSVSSAALPEMDKQVAISSLSVVIKYLELLNDESNFGQFELTT
FELNQYMTLDHAAVRALNLFQDSSEFVQGTHSLAGLLNKCRTPQGQRLVNQWIKQPLMDK
NKIEERLDMVEAFMQDGELRQILQEDLLRRFPDFNRIGKKFQKKATLQDCYKMYQAINQI
PNVTQALEKNNGNRNMLLDAIFTKPLKELNCDFSNFQKMIDETLDMNTVESHEYLVKPSI
DPNLAELRESMNKLEKKMQGVLNVAAKELSLEAGKSIKLECNAQFGHFFRITYREEKVLR
NNVKYKILETQKNGVKFYNSALKDINEEYMKNRKEYEEMQDAVVKEIINVASGYREPIQI
LNDVIAQLDAIVSFAHASNAAPIPYVRPVILEKGQGRIILKASRHPCIEVQDDVAFIPND
VTFEKDKQMFHIITGPNMGGKSTYIRQTGVIVLMAQVGCFVPCDSAEVTIVDCILARVGA
GDSQLKGVSTFMAEMLETSSILRTATEHSLIIIDELGRGTSTYDGFGLAWAISEYIASKM
KAFAMFATHFHELTALADEIPTVNNLHVTALTTKETLTMLYRVKKGTCDQSFGIHVAELA
AFPKHVIECAKAKALELEDFQNIAISQEEDEEPAAKRCYREKQEGEQIIQDFLSQVKAMP
LTEMSEEEIRIKLKELKDNVLSKNNSFINGIISHINGTS
NT seq
2820 nt
NT seq
+upstream
nt +downstream
nt
atggcggcctccatagatgcttgtgtttctgctccacgggagggatgctggcccgaaggc
tggggtgccgaaaacggctttattcgcgccgtcttggcgttgcctgccaaaccgaaaact
actgtgaggttctttgagcgcggcgactactatacggtgcatggcgaagatgcaaaactg
gcggcgacggaagtcttcaaaacacgagtgatcattcggatcctgggatcaggagctcag
aaactcgagagtgttgcactcagcaagatgaattttgaatattttttgcgaaatcttctt
ttgattcgtcagtacagggctgaggtatacaagaacaaggcaggaaataaatccaccaaa
gagactgagtggtatttggcctataagggttctccaggtaaccttgctcaatttgaggat
gctcttttcagtaaccatgatatgtgctcttcagctggtgttgtagccatcaagctgtcc
tcagttgatggacagaaagttgttggagtaggatatgtggatttactgtcaagaaaacta
gaagtatctgaatttgcagataatgatcagttttccaaccttgaagcactgttgatacaa
atggggccaaaggaatgtttgctgccagttggggagactgctggagatatggagaaactg
aggcaggtggttcaaaggggaggaatcctgatcacagacaggaaaaagactgaattttca
acaaaggatgctgttcaagatctcaaccgtttgctgcaatcaggaaagaaagacagtgtg
tctagtgcagcgttacctgaaatggataagcaggttgccatctcttctctgtctgtagtg
attaaatacttagagctgttaaacgatgagtctaactttggacagtttgaacttaccacg
tttgaacttaatcaatatatgaccctggatcacgctgctgtcagagcccttaaccttttt
caggattcttcagaatttgtccaaggaacacattcactggctggattgttaaataaatgc
agaacacctcaaggacaaaggctagtcaaccagtggatcaaacaaccattgatggataag
aacaaaatagaagaaaggctagatatggtggaggccttcatgcaagatggagaactaaga
caaattcttcaagaagatctcctccgccgcttcccagatttcaatcggataggaaaaaaa
ttccagaagaaagctactctgcaggactgttataaaatgtatcaggcaattaatcagata
cctaatgtgacacaggcactggaaaaaaataatggaaaccgcaatatgctactagatgcg
atattcacaaaacctcttaaagagctaaattgtgatttctccaatttccaaaagatgatc
gatgaaactttggacatgaatacggtggaaagtcatgaataccttgtcaaaccttctatt
gatcccaatcttgctgaattgagagaaagtatgaataagctggaaaaaaaaatgcagggt
gtgctgaacgttgcagccaaggaactaagtttggaagctggcaagagtatcaaattagaa
tgcaatgcacagttcggacattttttcagaattacgtacagagaagagaaggttctgcgg
aataatgtgaaatataagatcttggaaacccagaagaatggggtgaaattctataacagt
gcattgaaagatattaatgaagagtatatgaagaacagaaaagaatatgaagaaatgcaa
gatgctgtagttaaagaaataattaatgttgcatcagggtacagagaacccattcaaatt
ctcaatgatgtcattgcccagctagatgccattgtcagttttgctcatgcatcaaatgca
gcaccaataccatatgtgcgcccagttattctagaaaaagggcaaggaagaattatcttg
aaagcttccaggcacccttgcattgaagttcaagatgatgttgccttcatcccaaatgat
gttacttttgagaaggacaaacagatgttccacatcattactgggccaaacatgggagga
aaatctacttatatacggcagactggggtgatcgttcttatggcccaagtaggatgtttt
gtgccatgtgactctgcagaagtgactattgttgactgcatcctggctcgagttggagct
ggagatagtcaactgaaaggggtatccaccttcatggcagaaatgctggagacctcctcc
atccttaggactgcaaccgagcattctttgataatcattgatgagttagggagaggaaca
tcaacatatgatggatttggattggcctgggcaatttctgaatacattgccagcaaaatg
aaagcttttgctatgtttgctactcattttcatgaattgaccgcactggctgatgaaata
cccactgtaaataacttgcatgttacggcattaactacaaaggaaacactgacaatgttg
taccgtgtgaaaaaagggacctgtgaccagagctttggtatccatgtagcagaattagct
gcctttcccaaacatgtgattgagtgtgccaaggccaaagctctggaactggaggacttc
cagaacattgcaatatctcaagaggaggatgaagaaccagctgccaaaagatgctacagg
gaaaagcaggagggggaacaaataattcaagatttcctttctcaagtgaaagcaatgcca
ttgacagaaatgtctgaagaagaaatccggatcaaactaaaggagttaaaggacaacgtt
ttgagcaaaaataattcttttataaatggaatcatttcccacatcaatggtacctcatga
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