Notechis scutatus (mainland tiger snake): 113423359
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Entry
113423359 CDS
T09026
Symbol
MSH6
Name
(RefSeq) DNA mismatch repair protein Msh6 isoform X1
KO
K08737
DNA mismatch repair protein MSH6
Organism
nss
Notechis scutatus (mainland tiger snake)
Pathway
nss03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
nss00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
113423359 (MSH6)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
nss03400
]
113423359 (MSH6)
DNA repair and recombination proteins [BR:
nss03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
113423359 (MSH6)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_I
PWWP
MutS_IV
MutS_II
MUM1-like_PWWP
Motif
Other DBs
NCBI-GeneID:
113423359
NCBI-ProteinID:
XP_026540500
Ensembl:
ENSNSUG00000016377
UniProt:
A0A6J1VCJ0
LinkDB
All DBs
Position
Unknown
AA seq
1334 aa
AA seq
DB search
MSRQSSLLTFFSKPAEKSHDGGSGSPTRDAEGRPPQETPPASAPSSSQGRTPALPPDCDF
NEFSPGDLVWAKLEGYPWWPCLVYAHPTEGSLLRGRGRASRIHVQFFEDDPSRGWVSIRY
IRPYKGSSGRDTQRGGMFHSSRPEIKRAMELADAAMRKGKSERLGLAVCDKPSESEEEEE
EEMEQVSDEGDDFDTAKELKSRNKRIARRKHSDGKAKKRKIFMDSDTEGSDMEFQPDEVS
SDENSVEICDNETSESETVPEKKRSVKALTKHSPKQAQEKTCKSPQEVNLKNNLSETPSR
ELCPEFMYKLASYAAPESFDFRSSINGGAAGGGEGDGNPTVWEHEKIDWLQDGRRKDGNR
RRQNDPDYDQSTLFVPEDYLKNCTPGMRKWWELKSQNFDAVIFYKVGKFYELYHMDAVVG
VNKLGLVFMKGTWAHSGFPEMAFDRFANVLVQKGYKIVRVEQMETPEQMEARCKSLAHPT
RFDRVVRREICRIISKGTQTYNILDGDYSETQNKYLLCIKEKTDDSAGLHRTYGVCFVDT
TVGKFYIGQFPDDRHCSRFRTLLAHHIPVQILFEKGNPSAETQKILKGLISFTIQESLTP
GSQFWNASKTLKTLIEEGYFQNKENTDSGITLPPVIKSMTAESDSLGFTPAENSELALSA
LGSCVFYLKKCIIDKELLSMANFEEYIPVDVDMVNRTRSSSISERKNQRMVLDGVTLANL
EILQNATRSSIEGTLLEKIDTCCTPFGRRLLKQWLCAPLYNPCAINDRLDAVEDLLAEAA
KMSDIRDRLKKLPDLERLLSKIHSIGSSLKNQNHPDNNAILYEEARYSKKKIIDFLSVLE
GFNIIIEILSILKDTVDGFKSKILKQIATVKSKNPVGCFPDLKAELERWDSAFDHNVARR
TGVVNPRTGFDSDYDKALADISEIEESLRQYLEKQRKRLGVRAVMYWGAGKNRYQMEIAE
TAVPQDLPDEYIMKSSRKGYKRYWTKDIEKMLNDIINAEERRDAAQKDCMKRLFYDFDKS
RKDWQTAVECIAVLDVLLCLACYSQGCDGPLCRPEILLPENTSPFLELKSSRHPCITKTY
FGDDFIPNDIIIGLEDEKTNSRATCVLVTGPNMGGKSTLMRQAGLLVIMAQLGCYVPAES
CRLTPVDRVFTRLGASDRIMSGESTFFVELSETSSILQHATQHSLVLMDELGRGTATFDG
TAIASAVVKELSENIKCCTMFSTHYHSLVEDYSHSLSVRLGHMACMVENECEDPSQETIT
FLYKFVKGACPKSYGFNAARLADIPEEVIQKGHKKAKEFEKAVLSMKVFRNLCWIAEGAL
AARDYLDKLTLLHV
NT seq
4005 nt
NT seq
+upstream
nt +downstream
nt
atgtcccgccagagcagcctcctcacgtttttctcaaagcctgcggagaagagtcatgac
ggcggcagcggaagccccacgagagacgccgagggccgccccccgcaagagacaccgccg
gccagtgcccctagtagcagccagggcaggacgccagcgcttccgcctgattgtgacttc
aatgagttttcacctggtgatttagtttgggccaaacttgaaggctacccatggtggcca
tgccttgtgtatgcacacccaacagaaggatcacttttaagggggagaggaagagcatca
cgtatccatgtacagttctttgaggatgatccttcaaggggctgggttagcattagatac
ataagaccatataaaggttcttcaggcagagacacccaaaggggaggtatgtttcacagt
tcaagacctgaaattaaaagagcaatggaactggcagatgctgctatgagaaagggtaaa
agtgaacgactaggtctagctgtgtgtgacaaaccttcagaaagtgaagaagaagaggaa
gaagaaatggagcaggtgagtgatgaaggtgacgatttcgacacagcaaaggaactaaaa
agtagaaataaaaggatagctagacgaaagcattctgatggaaaagccaaaaagagaaag
atttttatggattcagacacagagggttccgatatggaatttcagccagatgaagttagc
agtgatgaaaatagtgttgaaatatgtgacaatgaaacttctgaatctgaaactgtgcct
gaaaagaagcgttccgttaaagcacttactaaacattctcctaaacaagcgcaggaaaag
acatgtaaatccccccaagaggttaatcttaaaaacaacctatctgaaacacccagtagg
gaactctgtcctgagttcatgtataaattagcatcttatgcagctcctgaaagttttgat
tttcgatcaagcattaatggaggagcagccggagggggagaaggagatggtaatccaact
gtatgggagcatgaaaaaatagattggcttcaggatggaagaaggaaggatggtaataga
agacgacaaaatgatccagattatgaccaaagtactttatttgtgccagaggattatctt
aaaaactgcactccaggaatgaggaaatggtgggagttgaagagtcaaaattttgatgct
gtgattttttataaagttggaaaattttatgagttatatcatatggatgctgttgttggt
gtaaataaacttggattggtatttatgaaaggcacctgggctcactcaggttttccagaa
atggcatttgatagattcgccaatgtcctagtccaaaaaggttataaaattgtacgagtt
gagcagatggagacccctgagcagatggaagcacggtgtaaatctttggctcacccaaca
agatttgacagagttgtgcgtcgagaaatatgcaggataatttccaaaggcacacagacc
tataatattcttgatggtgactattcagagacccagaacaaataccttctttgcataaaa
gaaaaaacagatgattctgctggcctgcatcgtacttatggagtttgctttgttgataca
acagttggaaagttttatattggccagtttccagatgaccgtcattgttctaggtttaga
acacttctggctcaccatattcctgtccagatactttttgagaaaggaaacccctctgca
gaaacacaaaagatacttaaaggcttaatctcttttactattcaagaaagcttgactcct
ggttctcagttctggaatgcatctaaaactttaaaaactcttattgaagaaggttatttt
cagaacaaggagaatacggatagtggaatcactttgccccctgtaatcaaatccatgact
gcagaaagtgattcactgggatttactcctgcagaaaacagtgaacttgctctctctgct
ctaggcagttgtgtattctatcttaaaaaatgtattattgacaaggaacttttatcaatg
gcaaattttgaagaatacattcctgtagatgttgatatggttaacagaaccagatcaagt
agcatttctgagagaaaaaaccagcgaatggtactagatggggtaacactggcaaacctg
gaaatactgcagaatgcaaccaggagttcaatagagggcacgttattggaaaaaattgac
acttgttgtacaccttttggaagaagactcctgaagcaatggctctgtgcaccattatat
aatccttgtgccattaacgatcgcctggatgcagttgaggatctcctggctgaggctgct
aaaatgtctgatatccgggaccgtctcaaaaagctcccagatcttgaaaggctattgagc
aaaattcatagtattggatcttctcttaagaaccagaatcatccagacaataacgctatt
ttatatgaggaggctaggtacagcaagaaaaagattatagatttcttatctgtactggaa
ggatttaacataataattgaaattctctcaatcttgaaagatactgttgatggctttaaa
tctaaaatactaaaacaaatagcaacagtgaaatcaaaaaatccagtaggctgcttccca
gacttgaaagcggaacttgaaagatgggattctgcctttgatcataatgttgcacggaga
acaggtgtggttaatccaagaactggttttgattctgattacgataaagcattagcagat
atcagtgaaattgaggaaagtcttcgccagtatttggaaaaacaacgcaaaagacttggt
gtcagagctgtgatgtattggggagcaggcaaaaaccgttaccaaatggagattgcagaa
actgctgtgcctcaggatttacctgatgaatatatcatgaagtccagtagaaagggctat
aaacgttactggacaaaagacatagagaagatgttaaatgatattatcaatgctgaagaa
cggagagatgcagcacaaaaagattgtatgaaaagattattctatgacttcgataaaagc
agaaaagattggcaaactgcggtggaatgcattgctgttctagatgttttgttatgcctt
gcatgctatagtcagggatgtgatggaccattgtgccgcccagaaatcttgttgccagag
aacacctcaccttttctggagctcaaaagttcgcgtcatccatgcattacaaaaacatac
tttggagatgatttcatccctaatgatattataataggcttggaggatgaaaaaacaaac
agcagagctacttgtgtccttgtgactggtccaaacatgggaggaaaatctacgctcatg
agacaggctggtctcttggtaataatggctcagttgggatgctatgtacctgctgaatct
tgcaggcttactcctgttgatagagtgttcactagactaggagcttcagatagaattatg
tcaggagagagtacattctttgttgagcttagtgagacttcgagtatactgcaacatgca
acacagcattcccttgttcttatggacgagctagggagaggaacagcgacttttgatgga
actgctattgctagtgcggttgtcaaagaactttcagagaatattaagtgttgtacaatg
ttttcaacacattaccattctttagtagaagattattcccacagtctctctgtacgattg
ggacacatggcttgtatggtagaaaatgaatgtgaagatcctagtcaagaaacaatcaca
ttcctttataaatttgttaagggggcttgccctaaaagttatggatttaatgctgcacgg
cttgctgacattccagaagaagtgattcagaaaggccacaaaaaggcaaaagaatttgaa
aaggctgttctttcaatgaaagtatttaggaatctttgttggatagctgaaggagcatta
gcagccagagactatcttgacaaactaactctgcttcatgtttga
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integrated database retrieval system
