Notechis scutatus (mainland tiger snake): 113423418
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Entry
113423418 CDS
T09026
Symbol
CDH1
Name
(RefSeq) cadherin-1 isoform X1
KO
K05689
cadherin 1, type 1, E-cadherin
Organism
nss
Notechis scutatus (mainland tiger snake)
Pathway
nss04371
Apelin signaling pathway
nss04514
Cell adhesion molecules
nss04520
Adherens junction
Brite
KEGG Orthology (KO) [BR:
nss00001
]
09130 Environmental Information Processing
09132 Signal transduction
04371 Apelin signaling pathway
113423418 (CDH1)
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
113423418 (CDH1)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04520 Adherens junction
113423418 (CDH1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
nss03036
]
113423418 (CDH1)
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
nss04515
]
113423418 (CDH1)
04090 CD molecules [BR:
nss04090
]
113423418 (CDH1)
Chromosome and associated proteins [BR:
nss03036
]
Eukaryotic type
Centrosome formation proteins
Other centriole associated proteins
113423418 (CDH1)
Cell adhesion molecules [BR:
nss04515
]
Cadherins
Major cadherins
113423418 (CDH1)
CD molecules [BR:
nss04090
]
Proteins
113423418 (CDH1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Cadherin
CADH_Y-type_LIR
Cadherin_pro
TM_ErbB1
BACON_2
Big_9
Cadherin_4
Motif
Other DBs
NCBI-GeneID:
113423418
NCBI-ProteinID:
XP_026540599
Ensembl:
ENSNSUG00000020403
UniProt:
A0A6J1VKT8
LinkDB
All DBs
Position
Unknown
AA seq
884 aa
AA seq
DB search
MGTQAGLGLLLLLLLLLQGEKGLSQDGAAASCRPGFSLEAYLFRVPRRDLERGRMLGRVD
FEGCAGRSPGAFLSQDTRFKLHPDGTVVVKRALHLHNQELSFLVHTWDLEGRKHSARVTL
QLQHQGHHRLLPHGETGPSAHGEVLYFPKSSSGLRRQKRDWVIPPILCSENERGPFPKKL
VQIKSSKDKESIVYYSITGQGADIPPVGTFIIERETGTLKVTRPLDREKIPRYVMLCHAV
LANGQTAEDPMEIIINVGDQNDNRPVFTQSVFEGSVEEGAKPGTSVMTVTATDADDAIDS
YNGVITYSILSQEPEPEKQMFTISNETGLISVVVSGLDRERIPQYTLVLQATDLLGEGLS
TTAKAVITITDANDNPPIFDPLMYNVVVPENEVGALVATLKVSDKDEENSLAWKAKYSIV
KGDEEANFAITTDPDTNNGLLTTAKELDYETQRQYILQVTVVNEVDFSVILSTSTATVTV
NVSDKNEPPVFIPPELKVSKPEDLSVGETVAQYTAQDPDRFLQQTLRYSVRSDPAGWLKI
DPETGMIKSKAPLDRESAFVKDDIYKAIIVASDNANKPATGTGTLLLHLEDVNDNWPEPD
PRMFDICSRSPEPQVLSIVDKDMPPNTSPFLAMLEFDSGANWTVKTNQDSLTLNLVKQLE
PGEYNIALKLTDGQGLSHVTTVKAMVCNCEGSAKTCDRKAFLPAAIETSAILGILGGILA
LLILLLLLLLFVRRRRQVKEPLLLPEDDTRDNVYYYDEEGGGEEDQDFDLSQLHRGLDAR
PEITRNDVVPTLMPAPQYRPRPANPDEIGNFIDENLKAADMDPTAPPYDSLLVFDYEGNG
SEATSLSSLNSSHGDQDQDYDYLNDWGNRFKKLADMYGGGEEED
NT seq
2655 nt
NT seq
+upstream
nt +downstream
nt
atggggacccaggcggggctcggcctgctgctgctgctgctgctgctcctccagggtgaa
aaggggctcagccaggatggggcagcggcctcttgccggccaggattcagcttggaggcc
tacctgttccgggtgcccaggcgagacttggagaggggccggatgttgggcagagtggac
tttgagggttgcgcagggaggagcccaggagccttcctttcccaggacacgcgcttcaag
ttgcatccagatggcacagttgtggtgaaacgggccctgcacctccacaaccaggaactg
agcttccttgtccacacgtgggacctggaaggcaggaaacattcggccagagtgaccctg
cagctccagcaccaaggccatcaccggctgcttcctcatggggagaccggtccgtctgct
cacggggaggtgctgtattttccaaagtcttcatctggcctgaggcggcagaagagagac
tgggtcatccctccgattctttgctctgagaatgagaggggccctttccccaaaaaactg
gtgcagatcaagtccagcaaagacaaagaaagcatcgtctactacagcatcactgggcag
ggggccgacatccctccggtcggcaccttcatcatcgagagagaaaccggcacgctgaag
gtgacccgcccactggacagggagaagattccccgctacgtgatgctttgccacgcggtg
ttagccaatggccagacagcagaggaccccatggagatcatcatcaatgttggcgaccag
aatgacaaccgtccagtgttcacccagagcgtcttcgaagggtccgtggaagagggagct
aaaccaggaacgtcggtgatgacagtgacggccacggatgcagacgacgccatagactcc
tataatggcgtcatcacttactccatcctcagccaggaaccggagccggaaaaacagatg
ttcaccatcagtaacgaaacaggcctgatcagcgtggttgtgtccggtctggaccgagag
aggatcccccagtacacgctagttctgcaagcgactgacctgctgggagaaggcttgagc
accaccgcgaaggctgtgatcaccatcaccgacgcaaatgacaacccgccaatcttcgat
cctttaatgtacaatgtggttgtgccagagaatgaggtgggggccctggtggccaccctg
aaggtcagtgataaagatgaggagaatagcttagcttggaaagccaagtacagcatcgtg
aaaggggacgaggaggcgaactttgcgatcactacagacccggacaccaacaatggtctt
ttgaccacggccaaggaactggattatgagacccaaaggcagtatattctccaagtgacc
gtagtaaatgaggttgacttctcggtcattctctcgacgtccacggccaccgtcaccgtc
aatgtgagcgataaaaatgaacccccagtcttcattccccccgaactgaaggtgtcaaag
cccgaagatctttctgttggcgaaaccgtagctcagtacacagcccaggaccctgacagg
ttcctgcagcagacactcagatactcagtgaggagtgaccctgctggctggctgaaaatt
gaccccgaaactggcatgattaagtcaaaagcccccctagaccgagagtcagcttttgtg
aaggatgatatctacaaagccatcattgtggcaagcgacaatgcgaacaagccggccacc
ggcacagggactctccttttgcatctggaggacgtgaacgacaactggccagaaccggat
ccccgaatgtttgacatctgcagccgcagtccagagccccaggtgttaagcattgtggac
aaggatatgccacccaacaccagccccttcctcgccatgctggaatttgactctggtgcc
aattggacagtcaagaccaaccaagatagtctgacccttaacctggtcaagcagctggag
cctggggaatacaacatcgccctcaagctgaccgatggccaggggctctctcacgtcacc
acggtcaaagccatggtctgcaactgtgaggggtctgccaaaacctgcgaccgaaaggcg
tttctgccagcggcaatagagacctctgccattctgggcatcctcgggggcatcctcgcc
cttctgatcctgctgctgctgctgctgctgttcgtgaggaggagaaggcaggtgaaggag
ccgctgctcctccccgaggacgacacgagggacaatgtctactactacgacgaagaaggc
ggaggggaagaggaccaggatttcgatctgagccagttgcatcgaggcctggatgcccgc
cctgaaatcacccggaatgacgttgttccaaccctcatgccggccccgcagtaccgtcca
cgccctgccaatcccgacgagataggaaatttcatcgacgagaacctgaaggcggcggac
atggaccccacggctcccccttatgactctctgctggtgtttgattatgaaggcaatggc
tccgaggccacctcgctcagttccctcaactcctcccatggagaccaggaccaagattat
gattacttgaatgactggggaaaccgcttcaagaagctggctgacatgtatggggggggc
gaggaagaggactag
DBGET
integrated database retrieval system
