Notechis scutatus (mainland tiger snake): 113423508
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Entry
113423508 CDS
T09026
Symbol
TAF1C
Name
(RefSeq) TATA box-binding protein-associated factor RNA polymerase I subunit C
KO
K15214
TATA box-binding protein-associated factor RNA polymerase I subunit C
Organism
nss
Notechis scutatus (mainland tiger snake)
Brite
KEGG Orthology (KO) [BR:
nss00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
nss03021
]
113423508 (TAF1C)
Transcription machinery [BR:
nss03021
]
Eukaryotic type
RNA polymerase I system
Basal transcription factors
SL1/TIF-1B
113423508 (TAF1C)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TAF1C_beta-prop
TAF1C_HB
TAF1C_C
Motif
Other DBs
NCBI-GeneID:
113423508
NCBI-ProteinID:
XP_026540734
UniProt:
A0A6J1VL75
LinkDB
All DBs
Position
Unknown
AA seq
862 aa
AA seq
DB search
MAAFPAALLPGLFRAGPPGRDGLEAGLRVGGWGQCGQLGVAAGGPGAPPLFVPHRLRKAR
ESWLPAEAAPLPLKPPEAAPPIEGESAGPALSALGSQLGRLFLDEPEAAFGATARLLHEH
VYLGDSTDWRRAGGVCGMTRSLRALEGRTGGGSASRPLSGVASLCRDWLSELPLKLVAEW
LHEDLAERRRRLAFDETPTGGALAWLPDGPCGEPPRRGCLVFPAGEAADRLCFQEAALRP
AASGALRPQLRGSPVQFALNGAVQQVAAAHLEGSDFLGVRSAHFCGAWRRQRGRAPVPLQ
VVCTEAPCSSIAVSPHLPGELSLCTLEGELYLWNVETGLRRLHQDRHSLFFRDHSSWRWS
EFSAHPRVLTFADRTGLKGLDQRVSSGGHFELFKVGAEAGCQRGERLLLSKYLGHLEPFQ
HLVATQFSVFVLDERFPLVPVLCWEHMMQRPPIYAHLAPARPPQTSHKVLLGAHHSQEML
LLQYSGGHSFPCQLQGAPQKLPSIRDCLPHFPVQVPARQRALSQRLSVPTAGIAAAPGQR
EGIQTLLVFQLSEAGDLFYQALLPQASGEEAEGQAPSHADSGAAVVGRPHQDPVSPDGAK
TACSPGAAALYRHWLRAWKRTAPPAQDRQCPPATLHQGCLFTHQELRETGGSSPSSLQAS
RRLHRAMREGHLSWGEESGVPVPPAPQGPPGELGQRLAASWAGDWVTWWLERLGSTKARR
QQELREQRRRAKRRRGTQSLSGSFTSSTSYQSEPSDWSGDWSRLAPVTGPALPAEPPVQA
PPPLLPSSQEGSPGLLSSQSLSARGIPRERRQTLRRYLAVLDQPPEPPEDDLPASQASAL
GSSQRGPFSSQGPQPKRARMGF
NT seq
2589 nt
NT seq
+upstream
nt +downstream
nt
atggcggccttccccgccgcgctgctgccggggctgttccgcgcggggccgcccgggcgc
gacggtctcgaggccgggctgcgggtgggcgggtggggccagtgcgggcagctgggcgtc
gcggcgggcggccctggagcgcctccgctcttcgtgccccaccgcctccggaaggcgcgg
gagagctggctgcccgccgaggccgccccgctgccgctgaagcccccagaagcggcgccc
ccgatcgagggcgagtccgccggcccggccctgagtgcgctgggctcgcagctggggcgg
ctcttcctggacgagccggaggcggccttcggggccacggcccggctgctgcacgagcac
gtctacctgggggactccacggactggaggagagccggaggcgtctgcgggatgacccgc
tcccttcgcgccctggaaggccggacgggaggcggcagtgcctcgcggcctctctccggc
gtggcctcgctgtgccgcgactggctgtccgagctgcccctgaagctggtggccgagtgg
ctccacgaggacctggccgagcggcggcggcggctggccttcgacgagactcccaccggc
ggggccttggcctggctgcctgacggcccctgcggcgaacccccgcgccggggctgcctg
gtgttcccggccggggaggccgcggaccggctctgcttccaggaggcggccttgaggcca
gcggccagcggcgccctgagaccccaactccggggcagccccgtccagttcgcgctcaac
ggggcagtgcagcaagtggcagccgcgcacctggagggcagcgacttcctgggggtccgc
tcggcccatttctgtggggcctggaggcggcagcgtggaagggcccctgtccctctgcag
gtggtttgcacagaagccccctgctcttccatcgcagtcagcccccacctacctggcgag
ctgtccttgtgcaccctggaaggggagctgtacctctggaatgtggagacggggctccga
cggctgcaccaggaccgccacagcctcttcttccgggaccattcctcctggcgctggagc
gagttttccgcccacccacgagtgctgacttttgccgaccgcactggcctgaagggcctc
gaccagagggtgtcctccgggggccacttcgagctcttcaaggtgggggctgaagccggc
tgccagcgcggggaacggctgctcctctccaagtacctgggccatttggagcccttccaa
cacttggtggccacgcagttttcagtctttgtgctggatgaacgcttccccctggtgcct
gtcctgtgctgggagcacatgatgcagcggccgcccatctacgcccacctcgcacctgcc
aggcctccacagaccagccacaaggtgctcctgggcgcccaccactcccaggagatgctc
ctgctgcagtactcaggtggccacagcttcccttgccagctccagggtgcgccccagaag
ctgccatccatcagggactgcctgccccacttccctgtgcaggtgcctgcgaggcagagg
gccctcagccagcgtctctcggtccccacagcaggcattgcagcagccccgggccagagg
gagggcatccaaacgctgctggtcttccagctttccgaggccggggacctcttctaccag
gcgctgctcccacaggccagtggggaagaggcggaggggcaggctccctcccacgcggac
tctggagctgctgtggtgggcaggccccaccaggaccccgtttctccagacggagccaag
accgcttgtagcccgggggctgcagccctgtaccggcactggctgagggcctggaagcgg
accgccccacctgcccaggaccggcagtgccctccagccacgctccaccagggctgcctc
ttcacccaccaagagttgagggaaaccgggggcagctccccgtcctcactgcaggcttcc
cgccgcctgcacagggccatgcgggaagggcacctctcctggggggaggagagtggggtc
cccgtgccccctgccccccagggacccccgggggagcttggccaacgactggcggcttcc
tgggcgggtgactgggtgacctggtggctggagaggctgggctccaccaaggcccggcga
cagcaggagctgagggagcagcggaggcgagccaagcggcgcagggggacgcagagcctc
tccggcagcttcacctcctccaccagctatcagtcggagcccagtgactggtcgggggac
tggtcccgccttgccccagtgactggtcccgccctgcccgcggagccccccgtccaggct
cccccccctctgctgcccagttcccaggagggctccccagggctgctctcctcacagagc
ctgagtgcccggggcatcccccgtgagcgccgccagaccctgcgcaggtacctggctgtg
ctggaccaacccccggagccccccgaggacgatctgcccgccagccaggcttcggccctg
ggcagcagccagcgggggcccttctcttcccaggggccccagcccaaacgggcccgcatg
ggcttctga
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