Notechis scutatus (mainland tiger snake): 113423523
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Entry
113423523 CDS
T09026
Symbol
VCP
Name
(RefSeq) transitional endoplasmic reticulum ATPase
KO
K13525
transitional endoplasmic reticulum ATPase
Organism
nss
Notechis scutatus (mainland tiger snake)
Pathway
nss04137
Mitophagy - animal
nss04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
nss00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
113423523 (VCP)
09140 Cellular Processes
09141 Transport and catabolism
04137 Mitophagy - animal
113423523 (VCP)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
nss03019
]
113423523 (VCP)
03009 Ribosome biogenesis [BR:
nss03009
]
113423523 (VCP)
04131 Membrane trafficking [BR:
nss04131
]
113423523 (VCP)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
nss04147
]
113423523 (VCP)
Messenger RNA biogenesis [BR:
nss03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Ran-mediated transport factors
113423523 (VCP)
Ribosome biogenesis [BR:
nss03009
]
Eukaryotic type
Pre-60S particles
Ribosome quality control proteins
113423523 (VCP)
Membrane trafficking [BR:
nss04131
]
SNARE
SNARE associated proteins
Others
113423523 (VCP)
Autophagy
Aggrephagy
Other aggrephagy associated proteins
113423523 (VCP)
Exosome [BR:
nss04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
113423523 (VCP)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA
AAA_lid_3
CDC48_N
RuvB_N
AAA_16
CDC48_2
AAA_5
AAA_33
AAA_2
AAA_22
TIP49
AAA_14
NPHP3_N
RNA_helicase
Vps4_C
AAA_28
nSTAND3
Parvo_NS1
Mg_chelatase
AAA_17
ATPase_2
IstB_IS21
AAA_18
AAA_7
ATPase
DUF815
ABC_tran
AAA_24
NB-ARC
TsaE
ResIII
Viral_helicase1
NACHT
Sigma54_activat
SLFN-g3_helicase
KAP_NTPase
Zot
DUF3944
Motif
Other DBs
NCBI-GeneID:
113423523
NCBI-ProteinID:
XP_026540749
Ensembl:
ENSNSUG00000011772
UniProt:
A0A6J1VL88
LinkDB
All DBs
Position
Unknown
AA seq
806 aa
AA seq
DB search
MASGPDSKADDLSTAILKQKNRPNRLIVDEAINEDNSVVSLSQAKMDELQLFRGDTVLLK
GKKRREAVCIVLSDDSCSDEKIRMNRVVRNNLRVRLGDVISIQPCPDVKYGKRIHVLPID
DTVEGITGNLFEVYLKPYFLEAYRPIRKGDIFLVRGGMRAVEFKVVETDPSPYCIVAPDT
VIHCEGEPIKREDEEESLNEVGYDDIGGCRKQLAQIKEMVELPLRHPALFKAIGVKPPRG
ILLYGPPGTGKTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEAEKNAPAI
IFIDELDAIAPKREKTHGEVERRIVSQLLTLMDGLKQRAHVIVMAATNRPNSIDPALRRF
GRFDREVDIGIPDATGRLEILQIHTKNMKLADDVDLEQVANETHGHVGADLAALCSEAAL
QAIRKKMDLIDLEDETIDAEVMNSLAVTMDDFRWALSQSNPSALRETVVEVPQVTWQDIG
GLEDVKRELQELVQYPVEHPDKFLKFGMTPSKGVLFYGPPGCGKTLLAKAIANECQANFI
SIKGPELLTMWFGESEANVREIFDKARQAAPCVLFFDELDSIAKARGGNIGDGGGAADRV
INQILTEMDGMSTKKNVFIIGATNRPDIIDPAILRPGRLDQLIYIPLPDEKSRVAILKAN
LRKSPVAKDVDLEFLAKMTNGFSGADLTEVCQRACKLAIRESIESEIRRERERQTNPSAM
EVEEDDPVPEIRRDHFEEAMRFARRSVSDNDIRKYEMFAQTLQQSRGFGSFRFPSGNQGG
AGPSQGTGGSGGGNVYSEDNDDDLYG
NT seq
2421 nt
NT seq
+upstream
nt +downstream
nt
atggcctcgggacccgattccaaagctgatgacttatcaactgcaattttgaagcagaag
aaccggcccaatcggttaatcgttgatgaagcaatcaatgaggacaacagtgtggtgtca
ctgtcgcaggccaagatggatgaactgcagctgttccggggagacacggtgctgctcaaa
ggcaagaaaaggcgagaggccgtctgcatcgtcctctccgacgactcctgctcggatgag
aaaatccgcatgaaccgggtggttcgcaacaacctgcgggtgcggcttggagacgtcatc
agcatccagccttgtccggatgtgaagtacggcaagcgcatccatgtgctgcccatcgat
gacaccgtggaagggatcaccgggaacctctttgaggtctacctcaagccatacttcctg
gaggcctacaggcccatcagaaaaggggacattttcctggtgcgtggaggcatgcgcgca
gtggaattcaaggtggtggagacggaccccagcccctactgcatagtcgctccagatacg
gtgattcactgtgagggagaacctatcaagcgagaggatgaagaggaatccctgaacgaa
gtgggttatgacgacattggaggctgccgaaagcagctggctcagatcaaggaaatggtg
gagctccctcttcgacaccctgctctcttcaaggccattggggtgaagcctccccgtgga
atcctcctgtacgggccgcctggcaccgggaagaccttgattgccagagctgtggctaac
gagaccggagcatttttctttctgatcaatggtcccgagatcatgagcaagttagcaggg
gagtcggagagcaacctgcgcaaggccttcgaggaagccgagaagaatgcgcccgccatc
atcttcattgacgaactggacgccattgctccaaagagggagaagacccacggggaagtg
gaacggcgcatcgtgtcccagttgctgaccctcatggatggcctcaagcagcgagcccac
gtcattgtcatggctgccaccaacagaccgaacagcatcgatccagccctccggcggttc
ggccgctttgaccgggaggtggacatcggcatccctgacgctactggccgcctggagatc
ttgcagatccacaccaagaacatgaagttggctgatgatgttgatctggagcaggtggcc
aatgagacccacggccatgtgggggctgacctggctgcgctgtgctccgaggcggccctg
caggccatccggaagaagatggacctgatcgacctggaagatgagaccatcgatgctgaa
gtgatgaactccctggctgtgaccatggacgacttccggtgggccctgagccagagcaac
ccctccgccctgcgcgagaccgtagtggaagtgccccaggtgacctggcaagacatcggg
ggcttggaagacgtcaagcgggaactccaggagctggttcagtaccccgtggagcatcct
gataaattcctcaagtttggcatgaccccgtctaaaggggtcctcttttacgggccccct
ggctgcggaaagaccctgctagccaaagccattgccaatgaatgccaggccaatttcatc
tccatcaagggcccagagctgctcaccatgtggtttggagagtcggaggccaacgtgcgc
gagatcttcgacaaggcccgccaagcagctccctgcgtgctgttcttcgatgagctggat
tccattgcgaaggcccgaggggggaacattggcgatgggggtggtgccgccgaccgggtg
atcaaccagatcctcacggagatggatggcatgtcgaccaagaagaacgtcttcatcatt
ggcgcgaccaaccggccagacatcattgatccagccatcctgcgccctgggcgcctggac
cagctcatctacatccctctgccggatgagaagtcccgcgtggccatcctcaaggccaac
ctgcggaagtcgcccgttgccaaggacgtggatctggagttcctggccaaaatgaccaat
ggcttctcgggagctgacctcacggaggtttgccagcgggcgtgcaagctggccatccgc
gagtcgatcgagagcgagatcaggcgggagcgggagaggcagaccaacccctcggccatg
gaggtggaagaggacgacccggtccctgagatccgccgggatcacttcgaggaagccatg
cgttttgcccgccggtcagtcagcgacaatgacatccgcaaatacgagatgtttgcacag
actctgcagcagagccgtggctttggcagcttcagattcccatcaggtaaccaggggggt
gctggacccagccagggcaccggaggcagcggcggaggcaacgtttacagtgaagacaac
gatgacgatctctatggttaa
DBGET
integrated database retrieval system
