KEGG   Notechis scutatus (mainland tiger snake): 113423667
Entry
113423667         CDS       T09026                                 
Symbol
THOC3
Name
(RefSeq) THO complex subunit 3
  KO
K12880  THO complex subunit 3
Organism
nss  Notechis scutatus (mainland tiger snake)
Pathway
nss03013  Nucleocytoplasmic transport
nss03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:nss00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    113423667 (THOC3)
  09122 Translation
   03013 Nucleocytoplasmic transport
    113423667 (THOC3)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:nss03019]
    113423667 (THOC3)
   03041 Spliceosome [BR:nss03041]
    113423667 (THOC3)
Messenger RNA biogenesis [BR:nss03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    TREX complex
     113423667 (THOC3)
Spliceosome [BR:nss03041]
 Complex C
  Other components
   EJC/TREX
    113423667 (THOC3)
 Other splicing related proteins
  Spliceosome associated proteins (SAPs)
   TREX complex
    113423667 (THOC3)
SSDB
Motif
Pfam: Beta-prop_THOC3 Beta-prop_IFT122_1st Beta-prop_WDR5 WD40_CDC20-Fz WD40 Beta-prop_EML_2 Beta-prop_WDR3_1st WD40_Prp19 WD40_WDHD1_1st ANAPC4_WD40 Beta-prop_Aladin WDR55 Beta-prop_WDR36-Utp21_2nd EIF3I Beta-prop_CAF1B_HIR1 Beta-prop_WDR3_2nd Beta-prop_WDR19_1st WD40_Gbeta Beta-prop_RIG_2nd Beta-prop_WDR90_POC16_2nd Beta-prop_IFT140_1st WD40_MABP1-WDR62_2nd Beta-prop_TEP1_2nd Beta-prop_EML Beta-prop_Vps41 Beta-prop_WDR36-Utp21_1st DSE1_N eIF2A Beta-prop_TEP1_C WD40_RFWD3 Beta-prop_NOL10_N WD40_MABP1-WDR62_1st Beta-prop_HPS5 Beta-prop_WDR35_TULP_N RMC1_N NBCH_WD40 Tricorn_2nd WDR90_beta-prop_4th PAC11 Beta-prop_ACSF4 Beta-prop_EIPR1 TRM82_WD Beta-prop_SPT8 ASA1 B-prop_COPA_B_2nd Beta-prop_WDR75_1st Beta-prop_NUP159_NUP214 Peptidase_S9_N Beta-prop_WDR41 PD40 Beta-prop_Nup120_160 CNH TP_0598_N YNCE Beta-prop_NWD2_C Beta-prop_WDR11_1st Cytochrom_D1 Beta-prop_LRRK2 WD_LRWD1 PROPPIN Beta-prop_ELP1_1st DPPIV_N
Other DBs
NCBI-GeneID: 113423667
NCBI-ProteinID: XP_026540947
Ensembl: ENSNSUG00000014778
UniProt: A0A6J1VCF3
LinkDB
Position
Unknown
AA seq 323 aa
MAVSPYVRDMQEKFRANTRSREFPAHGAKVHSVAWSCCGHRLASGSFDKTASVFLLDKDR
LVKENNYRGHGDSVDQLCWHPSNPDLFVTASGDKTIRIWDVRTTKCITTVNTKGENINIC
WSPDGQTIAVGNKDDVVTFIDAKTHRSKAEEQFKFEVNEISWNNDNNMFFLTNGNGCINI
LSYPELKPIQSINAHPSNCICIKFDPTGKYFATGSADALVSLWDVDELVCVRCFSRLDWP
VRTLSFSCDGKMLASASEDHFIDIAEVETGEKLWEVQCESPTFTVAWHPKHPLLAYACDD
KDGKYDSSREAGTVKLFGHANDS
NT seq 972 nt   +upstreamnt  +downstreamnt
atggctgtttccccttacgtgagggacatgcaggagaagttccgggctaacacgcggagc
cgcgaattccctgcgcacggagccaaggtccactcggtggcctggagctgctgcggccac
cgcctggcctccggctctttcgacaagaccgccagcgtcttcctgctggataaagaccgg
ttggtcaaggaaaacaattatcgtggtcatggagatagtgtggatcagttgtgttggcat
cctagtaacccagatctatttgtcacagcatctggtgataaaaccattcgtatatgggac
gttcgaaccactaagtgcattaccacagtgaatacaaaaggggaaaacattaacatctgc
tggagccctgatggccagactattgcagtagggaataaagatgatgttgtcacattcatt
gatgctaagacacatcggtccaaagctgaagagcaattcaagtttgaggtgaatgagata
tcttggaataatgacaacaatatgtttttcctcaccaatggcaacggatgcatcaacatc
ctcagttacccagagctgaaacccattcagtcaattaatgcccacccctcaaattgcatt
tgtattaagtttgatccaacgggcaagtattttgctactggaagtgctgatgcattggtt
agcctctgggatgtggatgagctggtatgtgtacgatgcttttctagacttgattggcct
gtcaggactctgagctttagctgtgatggcaagatgctggcttcagcctccgaagatcac
ttcattgatattgctgaagtagaaacgggggagaagctctgggaagtacagtgcgagtcc
ccaaccttcacagttgcttggcatccaaaacacccgctattagcctacgcttgtgatgat
aaagatggcaaatacgatagcagtagagaagcgggcactgtgaagctgtttggtcacgcc
aatgactcttaa

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