Notechis scutatus (mainland tiger snake): 113423846
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Entry
113423846 CDS
T09026
Name
(RefSeq) pre-mRNA-processing factor 39-like isoform X1
KO
K13217
pre-mRNA-processing factor 39
Organism
nss
Notechis scutatus (mainland tiger snake)
Brite
KEGG Orthology (KO) [BR:
nss00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
nss03041
]
113423846
Spliceosome [BR:
nss03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
113423846
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HAT_PRP39_N
HAT_PRP39_C
Suf
TPR_14
HAT_Syf1_CNRKL1_N
HAT_Syf1_CNRKL1_C
TPR_19
TPR_16
TPR_17
TPR_2
TPR_11
Motif
Other DBs
NCBI-GeneID:
113423846
NCBI-ProteinID:
XP_026541193
Ensembl:
ENSNSUG00000016896
UniProt:
A0A6J1VKM6
LinkDB
All DBs
Position
Unknown
AA seq
713 aa
AA seq
DB search
MAEAAAEAPAILGEAEGVQELPGAEAGTDKEGLLSQESNGPPKPDEAKPVQEINGESLED
SATALQAEPAREETLQPLASEVGMMMALSQPMEDLSITYPLEFERYWRATQENPLDFTAW
TELLQYVEQENHIYAARKAFDNFFLRYPYCYGYWKKYADMERRFDFIKETEEVFQRGLQS
IPLSMDLWIHYITFLQSTLDMNQPDSAQKICGTFEAAVAAAGVDFRSDKLWEMYVEWQKD
QGDLKAVTSIYDRVLSTPTQLYSHHWENFKDHLTSHPPVDILSMEELVWMQSKLASETAP
KTMEGEGEEEAPPGEELPPKAENKHEATEPQSQALGALDPEKVIEQSISIRQQIFSQNEA
EVSKRWNFEDGIKRPYFHVKPLERAQLRNWRDYLDFEIASGSHERTIVLFERCVIACALY
EEFWIKYIRYLENHSIAGARSVFQRACCYHLPRKPNIHLLWAAFEEKQGEVEEARRILKT
FEDYVPGLVMVRLRRVSLERRLGNMDIAEALLMEAIRDNEGMPISSFYSVKLARQVLKVQ
KNLAKARKILLEALEKDPDNAKLYANLLEMEFSADVRQNEGNTMSSFDRALTSGLPLETK
IIFSQRRVEFLEDFGSSINSLLMCYEEHQKLLNQQMMRKRLLENGSADETDDKRLRLEDA
AMGGGSVAMATTGITPLMATDASTAGTYNYNTWYQQQYGYQNTWNYNQYYQQT
NT seq
2142 nt
NT seq
+upstream
nt +downstream
nt
atggcggaggcagcggcggaggcgccggccatcctcggcgaggcggaaggcgtccaagag
ctcccgggggcggaagccggcactgacaaagaggggctcctgagtcaggagagtaatggc
cctcccaagccagatgaggccaagccagtgcaagagatcaatggggagagcctggaagac
agcgcgacagccctgcaggccgagccagccagagaggaaaccctgcagccccttgcttcg
gaagtggggatgatgatggccttgagccagcccatggaggacctgtccatcacctaccct
ctggagtttgagcgctactggagagccactcaagagaaccccctggactttaccgcatgg
accgaattgttgcaatacgtggaacaggagaatcacatctacgcagcccgcaaggctttc
gataacttcttcctgaggtacccctactgctacggctactggaagaagtacgcagacatg
gagcgacgctttgacttcatcaaggagaccgaggaggttttccagcgagggttacagtcc
atcccgctcagcatggacctctggattcactacatcactttcctgcagtccaccttggat
atgaatcaacccgattcagctcagaaaatctgcggcacttttgaggccgcagtggctgcc
gcgggagttgatttccgttcggacaagctctgggagatgtatgtggaatggcagaaggat
cagggggacctgaaggccgtcaccagcatttatgacagggtgctgtccactcccacccag
ctgtacagccatcactgggaaaacttcaaggaccatctcaccagccatccccctgtggac
attctctccatggaagagctggtatggatgcagtccaagctggcttccgagacggccccc
aagacgatggagggagaaggcgaggaggaagccccaccgggagaagaactgcccccgaag
gcggaaaacaagcacgaggccactgagccgcagagtcaggcattgggggcgttggatccg
gagaaagtcatagagcaatcgatttcaatccgccagcagatcttcagccagaacgaagcg
gaagtcagcaagcgctggaattttgaggatgggatcaagaggccctacttccacgtgaag
ccgctggagcgggcgcagctgcggaactggagggactacctggactttgagatagccagc
ggctcgcacgagcgcaccattgtgctgtttgagcgctgcgtcatcgcttgcgccctctac
gaggagttctggatcaagtatatcaggtacctagagaaccacagcatagctggagccaga
agcgttttccagcgggcgtgctgttaccatctgcctcgtaagcccaacattcatctcttg
tgggcagcttttgaggagaaacaaggagaggtggaggaagcccgacgtatcttgaagact
ttcgaggactatgtgcccggcttggtcatggtgcgtttgcggcgggtgagcctggaacgt
cggctggggaacatggacattgcggaggccctcctgatggaagccatacgggacaacgag
gggatgcccatctcctccttctactccgtcaagctggctcggcaagtcctcaaagtgcag
aagaacctggccaaagcacggaagattctcctcgaagccttggaaaaggacccggacaac
gccaagctctatgcgaacctcttggagatggaattcagtgctgatgtccggcagaatgag
ggcaacaccatgagcagtttcgaccgagccttgaccagcgggctgcccctggagaccaag
atcattttctcccagcgcagggtggagtttctggaagattttgggtcgagcataaacagc
ttgctgatgtgctacgaagagcatcagaaactcctgaaccagcagatgatgaggaagagg
cttctggaaaatggcagcgccgatgaaaccgatgacaaaaggttgagacttgaagacgca
gccatgggaggtggcagcgtagccatggcgacaacgggcatcacgcccttgatggcgact
gatgccagcaccgcaggcacttacaactataacacatggtaccagcaacagtacggatac
cagaacacgtggaactacaaccagtattaccagcagacctaa
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integrated database retrieval system
