Notechis scutatus (mainland tiger snake): 113424274
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Entry
113424274 CDS
T09026
Symbol
DHX16
Name
(RefSeq) pre-mRNA-splicing factor ATP-dependent RNA helicase DHX16
KO
K12813
pre-mRNA-splicing factor ATP-dependent RNA helicase DHX16 [EC:
5.6.2.6
]
Organism
nss
Notechis scutatus (mainland tiger snake)
Pathway
nss03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
nss00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
113424274 (DHX16)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
nss03041
]
113424274 (DHX16)
Enzymes [BR:
nss01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
113424274 (DHX16)
Spliceosome [BR:
nss03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-snRNP related factors
113424274 (DHX16)
Complex C
U4/U6.U5 tri-SnRNP related factors
113424274 (DHX16)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
OB_NTP_bind
Helicase_C
HA2_C
HA2_N
DEAD
AAA_22
AAA_19
Cas3-like_C_2
SecA_DEAD
PWI
AAA_30
nSTAND3
Flavi_DEAD
T2SSE
SRP54
Motif
Other DBs
NCBI-GeneID:
113424274
NCBI-ProteinID:
XP_026541691
Ensembl:
ENSNSUG00000003201
UniProt:
A0A6J1VEV3
LinkDB
All DBs
Position
Unknown
AA seq
1050 aa
AA seq
DB search
MAGELERWVSNQLHSLLGLSERHVVAFMVGLAQRSRTPEDLLSRLEETETLRVTEPTARA
FAQQLWERVPHQMPQERPARLAEQQALALQQKNRSYTLLEDSDDEETGKAARSSKRHHPS
QGPEGKQRKRHKHLRQRKEEEEDKDSDEKPSGEDTGRIPEEESEDEWDRSERERLQDLEE
RDAFAERVKRKDKDKTRNILERSDKKAYEEAQKRLKMVEEDKKFMIPELRKKSRWEYLAK
REKDKMEDLEAEIADEEYLFSEQELTALEQQELEYKRKVRDLAKQYKQAGEQEKMEKHNR
YYMPEESRSKKIPDRYEEPQADDHMAPRDEQRRWEEDHIGAAALRFGARDANQRHPRKNY
EYVLEDDEMIQFVNAVQMRGANQNKEEKPELSQAELKKLSIQEVRRSLPIFPYHEDLLAA
IAEHQMLIIEGETGSGKTTQIPQYLYEEGYTKKGMKIGCTQPRRVAAMSVAARVSQEMNV
KLGNEVGYSIRFEDCTSERTVLKYMTDGMLLREFLTEPDLSSYSVIIIDEAHERTLHTDI
LFGLIKDIARFRPELKVLIASATLDTERFSTFFDDAPIFRIPGRRFPVDIYYTKAPEADY
LEACVVSVLQIHVTQPRGDILVFLTGQEEIEACCEMLQDRCRRLGSKIAELVVLPIYANL
PSDMQAKIFEPTPPGARKVVVATNIAETSLTIDGIIYVIDPGFCKQKSYNARTGMESLIV
TPCSRASANQRAGRAGRVAAGKCFRLYTAWAYKNEMEETTVPEIQRTNLGNVVLLLKSLG
INDLIHFDFMDPPPHETLVLALEQLYALGALNHLGELTKLGRKMAELPVDPMLSKMILAS
EQYKCSEQILTIAAMLSVNNAIFYRPKDKVVHADNARMNFFLPGGDHLVLLNVYTQWVES
GYSMQWCYENFIQFRSMRRARDVREQLEGLMERIEVDITSTEGDYIPIRKAITAGFFYHT
ARLTRSGYKTVKHQQTVYIHPNSSLFEEQPRWLIYHELVFTTKEFMRQVIEIDSTWLLEV
APHYYKAKELEDASTKKLPKKMGKAREELG
NT seq
3153 nt
NT seq
+upstream
nt +downstream
nt
atggcgggcgagttggagcgctgggtatcgaaccagctccatagccttctggggctgagc
gagcgccatgtcgttgctttcatggtgggcctggcccagcggagtcggactccggaggat
ttgctctctcgcttagaggagaccgagacgctacgggtgaccgagcccaccgcgcgcgcc
ttcgcccagcagctctgggagcgggttccacaccagatgccacaggagcgtccagccaga
ttagctgagcaacaggccttagccttgcagcaaaagaatcgttcatacaccctgttggaa
gacagtgatgatgaagaaaccggtaaagcagcccggagctcaaagcgtcatcacccctca
caaggtcctgagggcaagcaacggaaacggcacaaacatctgaggcagcgcaaggaagaa
gaggaagacaaagactctgatgagaagcctagcggagaggacacgggacggattccagag
gaggagtcagaggatgaatgggaccggagtgaacgagagcggctgcaggacttggaagaa
cgtgatgcttttgcagaacgtgttaaacgcaaggacaaagacaagactcgcaatatcctc
gagcgatcagacaagaaggcatatgaagaagctcaaaagcgtttaaagatggtagaagag
gacaaaaaattcatgattccagaactacgtaagaaatcccgttgggagtatttagccaaa
cgagaaaaggataaaatggaagatttggaagcagaaatagcagatgaggagtacctcttc
tctgaacaagaactaacagctcttgagcagcaggagctggagtacaaacgcaaagtgcgc
gacttggccaaacagtacaaacaggccggagagcaggagaagatggagaagcacaatcgg
tactacatgccagaggagagccgcagcaagaagattcctgatcgctatgaggagccccag
gcagatgatcacatggctccaagagatgagcagcggcgctgggaggaagatcacattggg
gcagctgctctccgttttggggcccgggatgccaatcagcgccatcctcgcaaaaactac
gagtatgttcttgaggacgatgagatgatccagtttgtgaacgctgtgcaaatgcggggc
gcaaatcagaacaaggaggagaagccagagctgtcccaggctgaactcaagaaattgtct
atccaggaggtgcgccgcagccttcctattttcccataccatgaagacttactggccgcc
attgctgaacatcaaatgctcattattgaaggggaaactggctctggcaagactactcaa
atcccacagtatttgtacgaagagggttataccaagaaaggaatgaaaattggctgtact
caaccgaggcgagtggcagctatgagtgttgctgcccgtgtttcccaggaaatgaatgtc
aagcttggaaatgaagtagggtacagcatccgttttgaggattgcacttcagagcggaca
gtgttgaagtacatgacggatgggatgcttctcagagaattcctcactgaacctgacctg
agcagctatagcgtcatcatcatagatgaggctcatgagcgcacgctgcacactgacatc
ctgtttggcttgatcaaggacattgctcgtttccggcccgagctgaaggtgctgattgct
agtgctactctggacaccgagcgcttttccaccttctttgacgatgctcccatcttccgc
atcccggggcgccgttttcctgttgacatttattacactaaggcaccagaggctgattat
ttggaagcctgtgtggtgtcggtgctgcagattcatgttactcagccccgaggggacatc
cttgtgtttcttacaggccaggaagaaattgaagcctgctgtgagatgttacaagatcgt
tgccggcgcttgggctccaaaatcgcagaacttgtggtcctcccaatttatgctaatctg
ccctccgacatgcaagccaagatctttgaaccaaccccaccaggagcccggaaggttgtt
gtggccacaaacatagcagagacatcactgaccatagatggcataatttacgtgattgac
cctgggttttgcaagcagaagagttacaacgctcgcacgggcatggagtcacttattgtt
accccctgttctcgggcttctgccaatcaaagagcaggtcgggcaggccgtgtggctgca
gggaagtgcttccgtctctacacagcctgggcgtacaaaaatgagatggaggaaaccaca
gtgccagagattcagagaaccaaccttggcaatgtagtgcttcttctcaaaagcttaggc
atcaatgatttgattcactttgatttcatggatccaccaccccacgagactctagtattg
gcattagagcagctgtatgccttgggggccctcaaccatcttggtgaactcaccaagttg
ggccggaagatggcagaattgccagttgatcccatgctctcgaagatgattctagcttct
gaacaatacaagtgctcagagcaaatcttgaccattgctgctatgctttcagtcaacaat
gccattttttaccgtcctaaggacaaagtggttcatgctgacaatgcccgcatgaatttc
ttcctgccgggtggagaccatctggttcttctcaatgtttatactcagtgggtagaaagc
ggttactcaatgcagtggtgctatgagaatttcatacagtttcgttctatgaggagagct
cgagatgtgcgagaacagctggaaggtttgatggaacgcattgaggtggatattacttcc
actgaaggggactacattcctatccgcaaggccataacagccggtttcttttatcacact
gcccggctaacccgcagtggttacaaaacggtcaagcatcagcaaacagtgtacatccat
cccaacagctccttgtttgaagagcagccccgctggctcatttatcacgaactggtcttt
accactaaggaattcatgagacaggtgattgaaattgatagtacgtggctgctggaagtg
gcccctcactactacaaggccaaagaattggaagatgcctcaaccaagaaactgcccaag
aaaatggggaaggcacgggaagagctgggataa
DBGET
integrated database retrieval system
