Notechis scutatus (mainland tiger snake): 113424353
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Entry
113424353 CDS
T09026
Symbol
FDFT1
Name
(RefSeq) squalene synthase isoform X1
KO
K00801
farnesyl-diphosphate farnesyltransferase [EC:
2.5.1.21
]
Organism
nss
Notechis scutatus (mainland tiger snake)
Pathway
nss00100
Steroid biosynthesis
nss01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
nss00001
]
09100 Metabolism
09103 Lipid metabolism
00100 Steroid biosynthesis
113424353 (FDFT1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01006 Prenyltransferases [BR:
nss01006
]
113424353 (FDFT1)
Enzymes [BR:
nss01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.21 squalene synthase
113424353 (FDFT1)
Prenyltransferases [BR:
nss01006
]
Terpene biosynthesis
Squalene/phytoene synthase
113424353 (FDFT1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SQS_PSY
Motif
Other DBs
NCBI-GeneID:
113424353
NCBI-ProteinID:
XP_026541798
Ensembl:
ENSNSUG00000008356
UniProt:
A0A6J1VMI4
LinkDB
All DBs
Position
Unknown
AA seq
457 aa
AA seq
DB search
MASCSSKAATSLFKRTLAFSPPRAGGGGGGGSSSCLTGGGRLRTCGGTPRLPQRSRPRFL
FSQAAPPPLLLLQDSLSDSLRVCYKYLNQTSRSFAAVIQALDGELRHAVCIFYLVLRALD
TVEDDMTISLEAKVPMLHNFHSYLYQPDWKFMDSREKDRQVLEDFPTISLEFRNLAKVYQ
DVIADICHKMGLGMAEFLEKKMNSTKEWDKYCHYVAGLVGIGLSRLFSASELEDPVVGHD
VELANSMGLFLQKTNIIRDYLEDQLVGREFWPKEVWSKYVKKLSDLAKPENIDKAVQCMN
ELITNALYHVPDVLTYLSRLKNQSVFNFCAIPQVMAIATLAACYNNQQIFKGVVKIRKGQ
AVTLMMDATNIQAVKTIMYQYMEEICQKVPSTDPSSAKTQQIINTVQSMSLPSGTLVSRT
HYSPLYFSCIMILAALSWQYLNTVSKAAEEYVHTGEN
NT seq
1374 nt
NT seq
+upstream
nt +downstream
nt
atggccagctgcagctccaaagccgccacgtcccttttcaagcgaaccttggccttttcc
ccaccgcgtgcaggcggcggcggcggcgggggctcgagttcctgcctgactggcggtggc
cggttgcggacctgcggcggtacccctcgtctcccgcaacgctcgcggcctcgctttctg
ttctctcaggctgcgcctccgcctctgctccttttgcaggactcgctcagcgatagcctc
cgggtgtgttacaagtacttgaaccaaaccagtcggagcttcgccgccgtcatccaagcg
ctggacggggagttacgccatgcagtgtgcatcttctatttggttctccgagctctggat
actgtggaagatgacatgactatcagtcttgaagctaaggtccccatgttacacaatttt
cactcctacttatatcagccagactggaaatttatggacagcagagagaaggacagacag
gtgctggaagactttccaactatttccctagagttccggaatttggcaaaagtctatcaa
gatgtgattgctgacatttgtcacaagatgggtcttggtatggcagagtttttggaaaag
aagatgaattctaccaaagagtgggacaagtattgccactatgttgctggcctggtggga
attggcctctcccggctcttctctgcctcagaattagaagatcctgttgtcggtcacgac
gtagaattggccaactccatgggactctttctgcagaaaaccaacatcattagggactat
ctggaggaccaactggtgggcagagaattctggcccaaagaggtttggagcaagtatgtg
aagaagctgtcagatctggctaagccggagaacattgacaaagccgtccagtgtatgaat
gagctcattaccaacgccctatatcatgttcctgatgtcttgacatatttgtcccgcttg
aagaatcaaagtgtgttcaatttctgtgctattccacaggtgatggctatagccactttg
gcagcctgctacaacaaccaacagatcttcaaaggtgtggtgaagattcgaaagggacaa
gcagtcacattgatgatggatgctactaacatacaggctgttaaaaccatcatgtaccag
tatatggaagagatctgccagaaggtcccaagcacagacccttcctccgccaaaactcaa
cagatcatcaacactgtccaatccatgagcttacccagtggtaccctggtctcccggacc
cattattcacccctctatttttcctgcattatgattttagctgccttgagctggcagtat
ctgaacactgtctcaaaagcagcagaggagtatgtgcacactggtgagaactga
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integrated database retrieval system
