Notechis scutatus (mainland tiger snake): 113424398
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Entry
113424398 CDS
T09026
Symbol
TRIM28
Name
(RefSeq) transcription intermediary factor 1-beta isoform X1
KO
K08882
tripartite motif-containing protein 28 [EC:
2.3.2.27
]
Organism
nss
Notechis scutatus (mainland tiger snake)
Brite
KEGG Orthology (KO) [BR:
nss00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
nss01001
]
113424398 (TRIM28)
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
nss04121
]
113424398 (TRIM28)
Enzymes [BR:
nss01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
113424398 (TRIM28)
Protein kinases [BR:
nss01001
]
Serine/threonine kinases: Other
TIF1 family [OT]
113424398 (TRIM28)
Ubiquitin system [BR:
nss04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
113424398 (TRIM28)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-B_box
ANCHR-like_BBOX
zf-RING_5
zf-RING_UBOX
PHD
zf-RING_2
zf-C3HC4
zf-C3HC4_2
CEP104-like_TOG
YaaC
Motif
Other DBs
NCBI-GeneID:
113424398
NCBI-ProteinID:
XP_026541856
UniProt:
A0A6J1VFD1
LinkDB
All DBs
Position
Unknown
AA seq
845 aa
AA seq
DB search
MSASGTATVSAPAEAGGGGAAGDKQRSSSAPLNVEGIDLLEKCGVCRERLRSERDPRLLP
CLHTVCKECIKVEPVSGGNNKDGQVVDCPVCKHQCYLKDIVENYFLRDDDKEALGDARDA
NQCCTSCEDNAPATSFCVECQEPLCETCVEAHQRVKYTKDHTVRSTGSSKSQAREKTIYC
SVHKHEPLVLFCDTCDTLTCRDCQLNAHKDHQYQFLDDAVKNQRKMLASLVKRLGDKNAN
LQKSTKEVRTSIRQVADVQKRVQVDVKMSILQIMKELNKRAKVLVSDAQKVTEGQQEKLE
RQHWAMTKLQRHQEHILRFANWALESDNNTALLLSKKLIYFQLHRALKMIVDPVEPHGDM
KFQWDLNAWIKSAETFGQIVSERSGLPVTANAQTPQQRTNAASAAAGVAVRQGSVPPSQG
VQQMSLQTSIMNKGALLQPVLPSNSQRQAIPDCYINDASASSAGQPMDLGDGFGVEGSYS
GEMSGIKRTRVQDGETGLVRKVPRVSLERLDVDLTSDNQPPVFKVFPGNSREDYNLIVIE
QGGQQSATQQAGATVKEEQMEAAIEHPASASDTKDTKPVILAQDSLLPEGSVAPRLISPS
GSTSSAMEMQSVHSHDGTANGEENACCRICLKAGAVVMCDSCKKCYHLDCHLPALQEIPG
QDWKCLLCADPVIATGEEGTDLAAIFKDGEPKMLSNVDQKRCERVLLELLCSEPCRPLHR
LSNAPEGQNTIDLTLIRAKLQRKLSPPYASPDEFADDVWKMFRQFNKLTEDKEDVQSIIV
LQRFFETKLSAAFGDRKFSALREPINIDEPQKENTIASHISPVTDPGEAMSSKADSSSGD
EGMAI
NT seq
2538 nt
NT seq
+upstream
nt +downstream
nt
atgtcggcctctgggactgcaacggtctctgctcctgccgaagccggcggaggcggcgct
gccggggacaagcaacgctcctcctccgctcctctcaacgtggaaggtatcgacctgctg
gagaaatgcggcgtgtgccgggagcgactccgctccgagcgcgacccgcggctcctccct
tgcctccacaccgtctgcaaggagtgcatcaaagtcgagcctgtctcgggcggcaacaac
aaggatgggcaagtggttgattgcccagtttgcaagcaccagtgttatctaaaagacatt
gtggagaattactttttgagggatgatgacaaggaagctcttggtgatgctagagatgct
aatcagtgttgcactagctgtgaagataatgcccctgccaccagcttttgtgtggaatgc
caagagcccctgtgtgagacatgtgtggaggcccatcagagagtgaagtacactaaggac
catacagtccgatccacaggctcctccaaatcgcaggccagagagaagactatctactgc
tctgtccataaacatgagcctcttgttctgttctgtgatacctgtgacaccctgacatgc
cgggactgtcagctgaatgctcacaaagatcaccagtaccagttcttggatgatgcagtc
aagaatcaacgcaagatgctggcttcattggtcaagcgccttggggataaaaatgccaat
ctccagaagtcaaccaaggaagtgcgcacctcgatccggcaggtggcagatgtgcagaaa
cgtgtgcaggtagatgtgaagatgtctatcttgcaaattatgaaggagctcaataaacgt
gctaaggtgctggttagtgatgcacagaaagtcactgaaggccaacaagagaaattggaa
aggcagcattgggccatgactaagctgcagcgccaccaagaacatatcttgcgctttgct
aattgggccttagagagtgacaacaacactgcattgctgctctcgaagaaactgatttat
tttcaactgcacagggctctaaagatgattgtagatccagtggaacctcatggagacatg
aagttccagtgggacttaaatgcctggatcaagagtgcagagacgtttggtcagattgtg
tcagaacggagtggtttgccagtgactgccaatgcccaaacaccccaacagcggactaac
gctgcttctgctgcagcaggagtggcagtcagacaaggttctgtccccccttctcagggt
gtccaacagatgtctctgcagacaagcataatgaataagggagctttgcttcagcctgtg
ctgccttccaacagccagcggcaggccatccctgactgctatatcaatgatgccagtgcc
tcttctgctggacagcctatggaccttggtgatggctttggtgtagaaggatcatattct
ggtgaaatgtctggaataaaaagaacccgtgtccaggatggagaaactggtcttgtccgg
aaagtgccccgggttagtctggagcgactggatgtggatttgacatcagataaccagcca
cctgtcttcaaagtctttccgggcaattcccgtgaagattacaatctcattgtgattgaa
caaggaggtcagcaaagcgctacccaacaagcaggtgctacagtgaaggaggagcagatg
gaggcagccattgaacatcctgcttctgcctcagatactaaagacaccaagccagttatc
ttggcccaggattcccttcttccagaaggctctgtagccccccggctgatctcccccagt
ggcagcaccagctctgccatggaaatgcagtctgttcatagccatgatggcacagctaat
ggggaggaaaatgcttgctgcaggatctgcctgaaagctggtgctgtagtcatgtgtgat
agttgcaaaaagtgctaccacttggattgtcacctgcctgcccttcaggaaatccctggc
caggattggaaatgtctactgtgtgctgatccagtaatagccactggagaagaagggact
gacttggctgcaatcttcaaagatggagaaccaaaaatgctgtcaaatgttgatcagaag
agatgtgaacgagttctccttgaactactttgttctgaaccatgcaggcctcttcaccgg
ctttccaatgctccagaggggcagaacacaattgatttgactttgataagagcaaagcta
cagcggaagctgtcaccaccctatgcatctcctgatgaatttgcagatgatgtttggaag
atgttcaggcagtttaacaagctgactgaggataaggaggatgttcagtccatcattgtc
ctgcaacgcttctttgaaaccaaactgagtgctgcctttggtgacaggaaattttcagct
ctgcgtgagccaatcaacattgatgaaccacaaaaagaaaacactattgcttcccatatc
tccccggtcactgatccgggtgaggccatgtcttctaaggctgatagcagcagtggggat
gagggaatggcaatctaa
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