Notechis scutatus (mainland tiger snake): 113424492
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Entry
113424492 CDS
T09026
Symbol
VIM
Name
(RefSeq) vimentin
KO
K07606
vimentin
Organism
nss
Notechis scutatus (mainland tiger snake)
Pathway
nss04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
nss00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
113424492 (VIM)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
nss03019
]
113424492 (VIM)
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
nss04812
]
113424492 (VIM)
04147 Exosome [BR:
nss04147
]
113424492 (VIM)
Messenger RNA biogenesis [BR:
nss03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Factors that have mRNA localization signals
113424492 (VIM)
Cytoskeleton proteins [BR:
nss04812
]
Eukaryotic cytoskeleton proteins
Intermediate filaments
Intermediate filaments
Type III
113424492 (VIM)
Exosome [BR:
nss04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
113424492 (VIM)
Exosomal proteins of other cancer cells
113424492 (VIM)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Filament
Filament_head
DUF1664
DUF4407
TolA_bind_tri
GAS
BLOC1_2
DUF4515
CCDC22_CC
Golgin_A5
Sec10_N
Baculo_PEP_C
Motif
Other DBs
NCBI-GeneID:
113424492
NCBI-ProteinID:
XP_026541997
Ensembl:
ENSNSUG00000008736
UniProt:
A0A6J1VFD9
LinkDB
All DBs
Position
Unknown
AA seq
454 aa
AA seq
DB search
MSSRSTSSSYRRIFGGGRPSSTRSITSSTRYSVGSAIRPSSVRLVSSPGGIYASKAVRVR
SSFPPMRIGGDPLVDFSLADAINTEFKTNRTNEKAELQELNDRFANYIDKVRFLEQQNKI
LVAELEQLKGKGTSRLGDIYEEEMRELRRQVDQLTNEKARVEVERDNLGDDIQRLREKLQ
DEMLQREDAENSLQSFRQDVDNASLVRLDLERKVETLQEEIIFLKKLHEEEIRELQAQIQ
DQHVQIDMDVAKPDLTAALRDVRQQYESVASKNLQETEEWYKSKFADLSEAANRNNDALR
QAKQEASEYRRQIQSLTCEVDALKGTSESLERQMREMEDAFGLEAANYQDNIARLQEEIQ
NMKEEMARHLRDYQELLNIKMALDIEIATYRKLLEGEESRINVPIPTFASLNLRETNLES
IPIDTHSKRTLLIKTVETRDGQVINETSHHDELE
NT seq
1365 nt
NT seq
+upstream
nt +downstream
nt
atgagctcccggagcacttcttcctcctaccgccgcatattcggcggcggccggcccagc
agcacccgctctataacttctagcacccgctactcggtgggtagcgccatccgaccgagc
tccgtccgcctggtgtcctctcccggcggcatctatgcctccaaagccgtgagggttcga
agcagctttccgccgatgcgcatcggcggcgatcccctggtcgacttctccctcgccgac
gccattaacaccgagttcaagacgaaccgcaccaacgagaaggccgagctgcaggagctc
aacgaccgcttcgccaactacatcgacaaggtgcgcttcctcgagcaacagaacaagatc
ctggtggctgagctcgaacagctcaagggcaaaggcacctcccgcctgggcgacatctac
gaggaggagatgcgcgagctgcgccggcaagtggaccagctcaccaacgagaaggcgcgc
gtggaagtggagcgcgacaacctgggtgatgacatccagcgtctgcgcgagaaacttcag
gatgagatgcttcagagagaagatgctgagaactctttacaatcttttaggcaggatgtt
gacaatgcctccttggtccgtctggatctggaacgcaaagttgaaactctgcaagaagaa
attattttcttgaagaaacttcatgaggaggaaatccgtgagctgcaagcccaaatccag
gatcagcatgtccagattgatatggatgttgccaagcctgatctcactgctgccctgcgt
gatgtacgtcagcagtatgaatctgtggcttcaaagaaccttcaagaaactgaggagtgg
tacaaatccaaatttgcagatctgtctgaagcagccaacaggaacaatgatgccctgcgc
caggctaaacaagaggccagtgaataccgcagacagattcagtctctcacctgtgaagtg
gatgctcttaaaggaactagtgagtctttggaacgccagatgcgtgagatggaagatgcc
tttggacttgaagctgccaactaccaagacaatattgccagacttcaggaagaaatccag
aacatgaaggaagaaatggctcgtcacctccgagactaccaagagctgctcaatataaag
atggctcttgatattgaaattgctacttacaggaaactgctggagggagaggagagcaga
attaatgtgccaatcccaacttttgcttccctgaatctgagagaaaccaatcttgaatct
atcccaattgatacccactccaagagaacactgctaatcaagactgttgaaactagagat
ggccaagtaatcaatgaaacctctcatcatgatgaactggaatga
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integrated database retrieval system
