Notechis scutatus (mainland tiger snake): 113424709
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Entry
113424709 CDS
T09026
Symbol
TNC
Name
(RefSeq) tenascin
KO
K06252
tenascin
Organism
nss
Notechis scutatus (mainland tiger snake)
Pathway
nss04510
Focal adhesion
nss04512
ECM-receptor interaction
Brite
KEGG Orthology (KO) [BR:
nss00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
113424709 (TNC)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
113424709 (TNC)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
nss00536
]
113424709 (TNC)
Glycosaminoglycan binding proteins [BR:
nss00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
113424709 (TNC)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
EGF_TEN
fn3
EGF_Teneurin
Fibrinogen_C
EGF_2
EGF_Tenascin
Ig_DSCAM-DSCAML_C
Pur_ac_phosph_N
Fn3_Dep-1_2nd
NDNF
hEGF
EGF
Motif
Other DBs
NCBI-GeneID:
113424709
NCBI-ProteinID:
XP_026542327
Ensembl:
ENSNSUG00000011643
UniProt:
A0A6J1VGC9
LinkDB
All DBs
Position
Unknown
AA seq
1900 aa
AA seq
DB search
MALSTWVVASVAIFLFHQDASGGLIKRIIRQKRETGINVTLPEDNQPVVFNHVYNINVPV
GSLCSVDLDSPSGDSEFKVPSEPGKHYQEHTLNEDNQIVFTHRINIPRRACGCAAAPDIK
ELLSRLEELEELVSSLQQQCGSGSGCCSSPQTVKGTIEATPYCSGRGNYSNDVCGCICEQ
GWKGPNCSEPECPQNCNERGQCINGQCICDYGYTGYDCGELACPGDCNDQGKCVDGKCVC
FDGYAGDDCSFEVCLVPCSEYGNCVNGQCICMEGFTGVDCSKSLCLNNCNNRGHCVEEEC
VCDEGYTGEDCSELICPNDCYDRGRCINGTCYCETGFTGEDCGDLACPNDCHHNGHCENG
VCVCDEGFIGDDCSLRRCPNDCHKQGRCVNGECVCNEGFLGPDCGEVRCLNDCHNRGQCV
NGQCVCDEAFMGEDCRELRCPKDCNNHGQCVGGKCQCDEDYMGEDCGDLRCLHDCHNRGQ
CIKGQCVCDEGFAGEDCSQRRCPNDCHKRGKCVDGQCICEEAFTGLDCNELRCPNDCNDH
GRCVDGQCICDEGYTAEDCSELTCPQDCNRHGRCVNGVCECNEGFLGEDCGELACINNCN
NQGHCLNGQCVCDEGFTGVDCGQRKCPDDCNNRGQCIDGVCLCDEGYEGPACAGQSCPNN
CNDLGRCVAGRCVCEEGFIGADCSDVSPPKNLMVTEVTDKTINLEWANENVVNEYLISYI
PTSIDGLEFQFRVPGNKTSATIRELEPGVEYFIRVFAILRNKKSIPINARIATYLPAPDG
LKFKSVKETSVDVEWDAFNFPFHGWEIIFRSMKEEENGAIRSSLKSPQTTYLQQGLAPGQ
QYNVSLVVVKNQTRGPAVSRIVTTKLDAPSQIEAKDVTDTTVLITWFRPLAEIDGLELIY
GPKDTPGDRTSIDLSEDESQYSIGNLKPHTEYEVILVSRRGLMASDPITENFVTDLDAPQ
NLRHVSQTDRTITLEWENSRAMPDVYRIKYAPLSGGDHAEVTVPRSNQATSKVTLSGLRP
GTEYGIGVTSVKEDKESFPSTINAGTDLDSPKDLEVIDPTETAFTLRWKRPLAKIDRYRL
TYNTPLGKKNEIEIPPDSTSYILRSLDSGTEYTIILLAEKGRLKSKPSTVSGSTEEEPEL
GNLSIAKVYWDGFYLTWTAADGAYETFVIQVRESNQPEDTQTLTLPGTQRSINLSGLSPS
TLYTITIYGITQGYQTKPIFVESTTGAKPEVGNLTIWGVTPESFNLSWTTSRGNFELFTL
EIIDSNRLLEPMEYNISGSLRTAHISGLPPQTRFIIYLYGVTRGIRAQALRTTAVTEAEP
EVDHLLVSDATPHGFRLSWTADEGAFDSFVLKIRDSNRLLEPLEIIVPGHQRTQDIQGLK
EGTEYYVDLYGVISGRRSQPVNAIAMTAVGSPKEISFSEITETSTVVSWKPPLTRVDSFR
ISYGPEPGDHLKSLTVDGNQSRIKLVDLIPGIKYIVNVVAIKGFEESDPVSGSLVTELDS
PSGLRVVNITDSKALAVWQPALAAVDKYLISYLAEGETEVTQRVSGNTMEYDLVGLRPAT
EYTLKIQAIKGPQKSRILSASFITGPDAPRSLTASDVQFETALLTWKPPQGSITGYLLIY
ESADGKIKEVVLGPESTSYSLADLSSSTLYMAKLQALLHTLKSNFIQTTFTTTGLLYPYP
KDCSQTLLNGEIASGLYTIYINGNQSQPVEVYCDMSSDGGGWIVFLRRQNGEVNFYQNWR
TYESGFGDPNNEFWLGLEKLHRITSQGPYELRVDLRDRDETAYALYNQFTVGDARTRYRL
KVDGYSGDAGDSMHYHNGRSFSTFDKDNDSAITNCALSYKGAFWYKNCHRVNLMGRYGDN
SHSQGVNWFHWKGHEHSIPFAEMKLRPSSFRNLEGRQKRA
NT seq
5703 nt
NT seq
+upstream
nt +downstream
nt
atggccctctccacgtgggtcgtggcctcggtggccatctttctcttccatcaagatgct
agtggtggactcatcaagagaatcattcggcagaagagggaaacgggaatcaatgtgaca
ctgccggaggataaccaacctgtggtcttcaaccacgtctacaacatcaatgtccctgtg
ggctccctttgctctgtagacttggattctcccagtggagactcagaattcaaagtcccg
tccgagccaggcaaacactatcaggagcacacactgaatgaagacaatcagattgtgttc
acgcaccgcatcaatatcccacgacgggcttgtggttgtgcggcggccccagatatcaag
gagctactaagccgacttgaagaattggaagagctggtatcttctctgcagcaacagtgt
ggcagtgggtcagggtgctgttccagtcctcaaacggtgaaaggtaccattgaggctact
ccctactgcagtggacgaggaaactacagcaatgatgtttgtggttgcatctgcgaacag
ggatggaaaggaccaaattgctctgaaccagaatgcccacagaactgcaacgagagaggc
cagtgcatcaatggccagtgtatttgtgattatggttacaccggctatgattgtggagag
ctggcctgtccgggggactgcaatgatcaaggcaaatgtgtggatgggaaatgtgtgtgc
ttcgatggttacgctggggatgactgcagctttgaggtctgcttggtgccctgcagtgag
tatggcaattgtgtgaatggacaatgcatctgcatggaaggtttcactggggtggactgc
agcaagtccctttgccttaacaactgcaataatcgggggcactgtgtggaagaggagtgt
gtgtgtgatgaaggatacacgggtgaggactgcagtgagctcatttgccccaacgattgc
tatgaccggggtcgttgcatcaacggcacctgctactgcgaaactgggttcactggtgag
gactgtggagacctggcctgtccaaatgattgtcatcacaatggtcactgtgagaatggg
gtgtgcgtgtgcgatgaaggattcattggagatgattgttctctacggaggtgtcccaat
gactgtcacaaacagggacgctgcgtcaatggggagtgtgtgtgcaatgaaggcttcttg
gggccagactgtggggaggtgaggtgtctcaatgactgccacaaccggggccagtgtgtg
aatggccagtgtgtgtgtgatgaagccttcatgggggaggattgtcgtgaactaagatgc
cccaaggattgcaacaaccatggccagtgtgttggtgggaaatgtcagtgtgatgaggat
tacatgggggaggattgtggggatctgagatgccttcatgactgccacaatcgcggccag
tgcatcaaagggcagtgtgtatgcgatgagggctttgcgggtgaggactgcagccagcgc
aggtgtcccaacgattgccacaagcgagggaaatgtgtggatggccagtgtatatgtgaa
gaagctttcactgggcttgattgcaatgaactgcggtgccccaatgactgcaatgaccac
ggacgctgcgttgatgggcaatgcatatgtgatgaagggtacactgctgaagactgctca
gaactgacctgtccccaggactgcaaccgtcatggacgttgtgtcaacggcgtctgtgaa
tgcaacgaaggcttccttggggaggactgtggggagctagcttgcatcaacaactgcaac
aaccaaggccattgtctgaatggacaatgtgtctgtgacgagggcttcaccggtgtagac
tgtggccaacggaaatgccccgatgactgcaacaacagaggacagtgcattgatggcgtg
tgtctatgtgatgaaggatatgaaggccctgcttgtgctggacagtcctgccccaacaac
tgcaatgatcttggtcgttgtgtagccgggcgatgtgtctgtgaagaaggcttcataggt
gccgactgttcagatgtatctcctccgaagaatttgatggtgaccgaagtgacagataaa
accattaacttggaatgggcgaatgaaaatgttgtcaatgaatatctcatcagctacatt
ccgaccagcattgatggcttagaatttcagttccgggtacctggaaacaaaacatcagcc
accatccgggagctggaacctggtgtggaatatttcatccgtgtttttgccatcctaagg
aacaaaaaaagcatcccaattaatgcccgaattgctacttacttgcctgcccccgatggc
ttgaagttcaaatctgttaaagagacttccgtggatgttgaatgggatgcctttaatttc
cctttccatgggtgggagattatctttagaagcatgaaagaggaagagaatggggccatc
cgaagcagtctgaaaagccctcaaaccacctacctacaacaaggtcttgccccaggacaa
cagtacaatgtatctctggttgtcgtgaagaatcagaccagaggacctgctgtgtcgaga
atcgtgaccacaaaactggatgcccccagccagattgaagcgaaggatgttaccgacact
accgtcctcataacatggttcaggcccttagctgagattgacggacttgagttgatttat
gggcccaaggataccccaggagaccgcacctccattgacctctctgaagacgaaagccag
tattccattggaaatctcaagccacacacggaatatgaggtgatccttgtgtctcggcgt
ggactcatggcgagtgaccccatcactgaaaattttgtcacagatctggatgctccccaa
aatctgagacacgtttctcagacggaccgcactatcacgctggagtgggaaaacagtcga
gccatgccagatgtctacaggatcaaatacgcccctctctctggtggagaccacgctgag
gtcacggtgcccagaagcaatcaggccacctccaaagttacactctctggcctaagaccg
ggaacagaatacggcattggagtaacttcagtgaaagaggacaaagaaagttttccttcc
accatcaatgctggaaccgatctagatagtcccaaggacctggaggtcattgaccctact
gaaactgcttttactttacgttggaagagacctctggccaaaattgaccgttaccgcctt
acttacaacacccctctggggaagaagaatgaaattgagattccacctgatagcacatcc
tatatcctaaggtcactagattctgggacggaatacactatcatcctcctggctgaaaaa
ggcagactcaagagtaagccttcaactgtctctggttctacagaagaagaacctgagctg
ggcaatttatcaattgcaaaagtctactgggatggattctacctcacctggacagcagct
gatggtgcctatgagacttttgtcatacaggtgcgggagtccaaccaaccagaagataca
caaactctcacccttccggggacgcaacggtccataaatctctccggactctcgccgagt
actctttacacaatcaccatctatggaataactcagggctaccaaacaaaacccatcttt
gttgaatctaccacaggggcaaaacccgaagttggaaacctgaccatttggggcgtgacc
ccggaaagcttcaacctctcatggacgacgtcccgaggaaactttgagctctttaccctt
gaaatcattgattccaacaggttgctggaacccatggaatacaacatttcaggcagttta
aggactgcccatatctcagggctgcccccgcaaaccaggttcattatctacctctacgga
gtcactcgtggcatccgcgcccaggcattaagaacaactgccgtaacagaagccgaacct
gaagtagatcaccttttggtatcggacgctaccccccatggtttccgcctgtcttggaca
gcggatgaaggagcctttgacagttttgtccttaaaatcagggattccaacaggctttta
gaacctctggagataatcgtcccaggtcatcaacgaactcaggacatccaagggctgaaa
gaagggaccgaatattatgtagatctctacggagttatcagcggacggcgttcccagccc
gtaaatgcaattgctatgacagcagtgggatccccgaaggaaatctctttctcagaaatt
acagaaacttcaactgtggttagttggaagcctcccttgacgcgggttgacagtttccga
atttcatacggcccagaacctggagatcacctcaaatctctgaccgtggatggaaaccag
agtagaatcaagctagtagatctgatccctggcataaaatatatcgtcaatgttgtagct
atcaaaggttttgaagaaagtgaccctgtttctggatctctagttacagaattggacagt
ccgtctgggctgagggtagtgaacatcacggactccaaagctttagctgtttggcaacca
gccctcgccgcagtggacaaatatttgatatcctatcttgcagaaggagagacagaagtg
acacaaagagtatctggcaataccatggaatatgatctcgttggccttcgaccggctact
gaatacaccctcaagattcaagccatcaagggccctcagaaaagcaggattctctctgcc
agtttcattacaggtcctgatgctcccagatctctaactgcttctgatgtccagtttgaa
acagctctgctcacgtggaagccaccccagggctctatcacaggctaccttctgatctat
gaatctgctgatggcaaaatcaaggaagtggtcctggggcccgaatctacttcgtacagc
ttggcagacttgagttcctccactctatacatggcaaagctgcaggccctgctccacaca
ctaaagagcaacttcatccaaaccacgttcaccacaactggacttctctacccttacccc
aaagactgctcccaaactctgctgaatggggaaatagcttctggattgtacaccatctat
atcaacggcaaccaatctcagcctgttgaagtgtattgtgacatgagttctgacggaggc
ggatggattgtctttttgagaaggcagaacggcgaagtgaacttctaccagaattggagg
acttatgagagtggttttggagatcccaataatgaattctggctagggctggagaagctt
caccgaatcacttcccaaggcccatatgagctgagggtggacctgcgcgatcgcgacgag
accgcctatgctctctacaaccagttcaccgtgggggatgccaggacacgctatcggctg
aaagtagatggctacagtggtgacgcaggtgattccatgcattaccacaatggacgctcg
ttctccacctttgacaaggacaatgactccgccatcacaaattgtgccttatcatacaaa
ggggcgttctggtacaaaaactgtcatcgagtcaaccttatgggtcggtatggagacaac
agtcacagccagggagtcaactggttccactggaaaggccacgagcattccattccgttt
gcggagatgaagctacggccttccagttttaggaatttggaaggaaggcagaagagagca
taa
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integrated database retrieval system
