Notechis scutatus (mainland tiger snake): 113424723
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Entry
113424723 CDS
T09026
Symbol
WHRN
Name
(RefSeq) whirlin
KO
K21879
whirlin
Organism
nss
Notechis scutatus (mainland tiger snake)
Brite
KEGG Orthology (KO) [BR:
nss00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
nss03037
]
113424723 (WHRN)
Cilium and associated proteins [BR:
nss03037
]
Primary cilia and associated proteins
USH complex and associated proteins
113424723 (WHRN)
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
PDZ
PDZ_6
PDZ_2
HHD_RTEL1
DUF6288
USH1C_N
PDZ_Tricorn
Motif
Other DBs
NCBI-GeneID:
113424723
NCBI-ProteinID:
XP_026542346
UniProt:
A0A6J1VGT4
LinkDB
All DBs
Position
Unknown
AA seq
908 aa
AA seq
DB search
MSADLDRLSVGSRASSASSSPSFDGAGKGAAGQAGLRSGGPGSGIRLLSANVRKLHGALN
LLLSEGEREQFIHCLNVYHCRRNVYDLVQTLKVLLDGPEKRQLLPMLRLVIPRSDQLLFD
QYTSEGLYLKADFLPIAGPGYDGAGPGEVRRMTLKRQKAQEGLGFSIRGGSEHSVGIYVS
LVEPGSLADKEGLRVGDRILKVNDKPLDKVTHAEAVKALKGSKKLNLTVHSVGRIPGGYR
TNHIYTWVDPQGRSISPPVGLIQHQSSSLGKESEKRSHLQLLQEGDEKKVNLVLDEGRSL
GLMIRGGSEYALGIYITGVDKDSEAENTGLKVGDQILEVNGRSFLSISHDEAVNLLKSSR
HLIMTVKDVGRLPHARATVDETKWIPSSQMGETMVNSAGASDDPMGEMIPKPSFYKGLTG
SQVTLSSLVNQSRVMLEEHARHLLNEPERTTMAYYLDEYKEKNISIGSLIMALFELLNTH
AKFSLLSEVRGVIAPQDLDHFDNLVLKREIEFMKARQPSGTGTDCYSTTTSYSNSASCTE
SHFTSTTASSARERLLWLIDLMEDDVSSFYEELPAFRASPPAPSSQSRPDPSDQVHKPSL
GSSESSQSGLFFMAPQSLSEKDTHSLASNSTEDSASSSIYASISPATRVSRKPLEARLLT
VHQHPMLPFPRIQSPTRLKQPSPEAAGTAPSSPTHPPLPSRPAASPPREKGGFEVGNTQH
FIMVEVHRPNSEPDVNEVKPLPHARASTLSQLSASGQTLSEDSGVDLGEAELSTGRERTQ
RLQGLPPAQTPQGAPRAGRAVEAGPKPPGLREPTSHLVRVSKSAPTLGIAIEGGANTRQP
LPRIVTIQKGGSAHNCGQLKVGQVILEINGMALCDKEHREAARIIAEAFKTKEKDYIDFL
VTEFNVAL
NT seq
2727 nt
NT seq
+upstream
nt +downstream
nt
atgagcgcagacttggaccgtctctcggtgggttcgcgcgcctccagcgcttcttcctcg
ccttccttcgacggggcgggcaagggggctgcgggacaggccgggctcaggagcgggggg
cccggatccggcatccggctgctgtcggccaacgtgcggaagctccacggggcactcaac
ctgctgctgagcgaaggcgagcgggagcagttcatccattgccttaacgtctaccactgt
cgccggaatgtctacgacttggtgcagacgctcaaagtcttgctggacggcccagagaag
aggcagctgctgcccatgttgcgcctggtcatccctcgctcggaccagcttctcttcgac
cagtacacctcggaggggctctacctaaaggcggacttcttgcccatcgctgggccaggg
tacgatggggccgggccaggagaggtcaggcggatgactctcaagaggcagaaggctcaa
gaagggttgggtttcagcatccgagggggctctgagcacagcgttggcatctacgtctcc
ctggtggagccgggctccttggcggataaagagggccttcgggtgggagaccggatcttg
aaggtcaacgacaagccgctggacaaggtgacccatgctgaagccgtcaaggccctcaag
ggatccaagaagctgaacctgactgtccattcggtgggtcgcatccctggcggctacaga
accaaccacatctacacctgggtggacccccaaggacgaagcatctctcccccggtcggc
ctgatccagcatcagagcagctccttgggcaaggagagtgagaaaagaagccacctccaa
cttctgcaagaaggcgatgaaaaaaaggttaaccttgttttggatgaagggcgatctctg
ggcctcatgattcgaggcgggtctgaatacgccctcgggatttacatcacgggggtggac
aaggattcggaagcagaaaacactggcttgaaagttggagaccagattctggaggtcaac
gggcgaagcttcctcagcatttcccacgacgaggccgtgaacctcctcaagtcctcccgc
catctcatcatgaccgtcaaagacgtgggaaggctacctcatgcccgggccacagtggat
gagaccaagtggatccccagctcccagatgggagaaacaatggtcaattctgcaggggcc
tctgacgatcccatgggggagatgataccaaagccatccttctataaaggtcttacagga
tctcaagtaacgttgagtagcttggtgaaccaaagccgagtgatgctggaggaacacgca
cgccacctcctgaatgaacccgagaggaccaccatggcttactacctggatgaatataag
gagaagaacatctcgatcggttccctcatcatggctctctttgaactgctcaacacccat
gccaagttctccctcctgtcggaggtcagaggggtgatagctccacaagacctggaccat
tttgacaacttggttcttaagagggaaatagaatttatgaaggcccggcagccctccggg
acaggaaccgactgttactctactacaacctcctacagcaattctgcctcgtgtaccgaa
agccattttacatctaccacggctagttcagctcgggagagactcttgtggctgattgat
ttgatggaggatgatgtctcctctttctatgaagaacttccagcttttagggcctcacct
ccggctccttcctctcagtcacggccagatccttccgaccaagtgcacaaacccagtttg
ggatcgtctgaatcttcccagtcggggctgttcttcatggcccctcaaagcctctctgag
aaggacacccacagcctcgcctccaactccacggaggactcggcctccagctccatctac
gcgtccatctctccagcgactcgcgtttcgaggaagcccctggaggcccggctgttgaca
gtccaccagcaccccatgctacctttccctcggatccagtcacccacccggttgaaacag
ccttccccggaggctgctggcacagccccaagctcccctacccacccaccccttccctcc
cgcccagccgcttcccctcccagagagaaggggggttttgaagtggggaacacgcagcac
tttatcatggttgaagttcatcggccgaatagcgaaccggatgtgaatgaagtcaagcca
ttgcctcatgctagagcctccacgctctcccagctctcggccagcgggcagacgctgagc
gaagacagcggcgtcgatctgggggaagcggagctgagcaccggcagggagaggactcag
cggctgcagggcctgccaccagcacaaactccccagggagccccccgagcgggcagagcg
gtagaggcaggacccaaaccgccaggcctccgggagccgacttctcatctagtccgggtg
tcgaagagcgccccgaccttgggcatagccatcgaagggggtgcgaacacgcgacagccc
ctgcccaggatcgtcacgatccagaagggcggctccgctcacaactgcggccagctgaag
gtgggccaagtgatcttggaaatcaacggcatggccctctgcgacaaggagcacagggaa
gccgctcgcatcatcgccgaggctttcaagacgaaggagaaggactacatcgatttcctc
gtcacagaattcaatgttgcactttag
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