Notechis scutatus (mainland tiger snake): 113424821
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Entry
113424821 CDS
T09026
Symbol
COL23A1
Name
(RefSeq) collagen alpha-1(XXIII) chain
KO
K24355
collagen type XXIII alpha
Organism
nss
Notechis scutatus (mainland tiger snake)
Brite
KEGG Orthology (KO) [BR:
nss00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
nss00536
]
113424821 (COL23A1)
Glycosaminoglycan binding proteins [BR:
nss00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
113424821 (COL23A1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Collagen
Motif
Other DBs
NCBI-GeneID:
113424821
NCBI-ProteinID:
XP_026542484
UniProt:
A0A6J1VR98
LinkDB
All DBs
Position
Unknown
AA seq
653 aa
AA seq
DB search
MSGPREKAPEAASQSGGRCAGGVGRGPVILSLLFSLLSVGACFLLSAKTSKLQGRLVALE
EELASRAWSPGEQLAAEPLLAALQPQVDDLLQEKLSEGLAKLRTAREVPSECHCPPGPPG
RRGKPGRRGEPGPPGQSGRDGYPGPLGLDGKPGPPGAKGDKGEQGDIGPRMAFPRLSHGF
LSDQHMFSRRILKGDQGKDGVTGPPGPPGQPGSRGPPGDTGKDGPKGPQGLPGEKGEAGV
MGESGIPGEKGDAGTSGEPGVQGPKGEPGTSGPQGESGIQGLPGSKGEPGSIGGKGEKGI
DGLPGPKGEPGEKGADGHIGPRGPPGLKGEQGDTVVIDYDGRILEALKAVGKPKLTGPPG
PQGEPGPQGAPGPKGELGLPGPPGVDGERGLKGSKGDQGSSGLVGQKGEIGEVGMIGLPG
PKGMKGEQGNPGVMGQKGEIGEMGLSGPPGIDGPRGEPGTPCEQNLIIPEPGPPGVPGLR
GPPGPMGPQGIQGHKGPQGSQGQKGSDGSKGAKGESGHRGEKGPLGPHGPPGTPGLIGLP
GTKGEKGKPGEPGLDGFPGLRGEKGEKSERGEKGERGLPGRKGAKGQKGEPGPPGLDQPC
PVFIFKGEPNLPELDGVEMLCPLGPDGLPVPGCWHKTEAEKGEKMKKKKKIQP
NT seq
1962 nt
NT seq
+upstream
nt +downstream
nt
atgagcgggcctcgagagaaggcgcccgaggctgcgtcccaaagcggcggccgctgcgcc
gggggcgtcggcaggggccccgttatcctctcgctgctcttctcgcttctctcggtgggc
gcctgctttctcctcagcgccaagacctccaagctgcaagggcgactggtggccctggaa
gaagagttggccagccgcgcctggagccccggagagcagctggccgccgagcctttgctc
gccgcgcttcagcctcaggtggacgaccttctccaggagaaactgagtgaaggattagcc
aaactacgtacagcaagagaagtaccctctgaatgtcattgcccaccaggtccaccagga
agaagaggaaagcctggacgacggggagaaccaggtcctccagggcagtcaggacgagat
ggttacccggggccccttggattggatggaaagccaggacctccgggagcaaaaggagat
aagggtgagcaaggagacattggcccaaggatggcttttcctcgcctcagtcatggattt
ctctctgaccagcatatgtttagccgacgtattcttaagggagaccaaggtaaagatggt
gtcactggcccacctgggcctcctggacagccgggttcaagagggcctcctggagataca
ggaaaagatggcccaaagggaccgcaaggtcttcctggcgagaaaggagaagctggtgtc
atgggcgaatctggtattccaggggaaaaaggtgatgctgggacttcaggagaaccagga
gttcaaggaccaaagggagagccaggaacttctgggccccaaggagagagtggtattcag
gggctgccagggtcaaagggagaaccaggaagcattggcggaaagggagaaaaaggcata
gatgggctcccagggccaaagggtgagcctggggagaagggagcagatggacatatcggg
ccaaggggacctccaggcctgaaaggagaacagggtgatacagtagtaattgattatgat
ggtaggatcttggaagctctcaaggctgtggggaaacccaaattgacggggccaccagga
cctcaaggggaaccagggcctcaaggcgctccaggaccaaagggggagcttggcttgcct
ggtccacctggagttgatggagagaggggattgaaagggtcaaagggagatcaaggaagc
tctggactagtaggacagaagggagagattggagaagtgggcatgattggtttacctggc
cccaaaggaatgaaaggagagcaaggaaaccctggagtaatgggacagaaaggagagata
ggagaaatgggcttatctggtccaccgggtattgatggacctagaggagaacctgggaca
ccctgtgagcaaaaccttatcatacctgaaccggggcctcccggtgtaccaggtctacga
ggtccaccaggtcctatgggtcctcaagggatacaaggacataagggccctcaaggaagt
caaggacaaaagggctcagatggttcaaagggtgcaaaaggtgaaagtggccatagaggt
gaaaaaggaccccttgggccacatggtcctcctggcactcctggacttattggtttacca
ggtaccaaaggggagaagggaaagccaggggaaccaggattagatggtttccctggactc
cgaggagaaaaaggagaaaaaagtgaaagaggagaaaagggagaaagaggattgccaggc
agaaaaggagcaaagggacaaaaaggagaaccaggccctcctggattagatcagccttgc
cccgtgttcatttttaaaggggagccaaatttaccagaactggatggtgtggaaatgctg
tgtcctttgggtccagatggattaccagtaccaggatgttggcacaagacagaggcagaa
aagggagagaaaatgaaaaagaaaaaaaagattcagccctag
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