Notechis scutatus (mainland tiger snake): 113425028
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Entry
113425028 CDS
T09026
Symbol
DDX55
Name
(RefSeq) ATP-dependent RNA helicase DDX55
KO
K14809
ATP-dependent RNA helicase DDX55/SPB4 [EC:
5.6.2.7
]
Organism
nss
Notechis scutatus (mainland tiger snake)
Brite
KEGG Orthology (KO) [BR:
nss00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
nss03009
]
113425028 (DDX55)
Enzymes [BR:
nss01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
113425028 (DDX55)
Ribosome biogenesis [BR:
nss03009
]
Eukaryotic type
Pre-60S particles
Helicases
113425028 (DDX55)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
CTE_SPB4
ResIII
Helicase_C_2
CTT_SPB4
SBF_like
Cas3-like_C_2
AAA_22
Motif
Other DBs
NCBI-GeneID:
113425028
NCBI-ProteinID:
XP_026542778
Ensembl:
ENSNSUG00000011627
UniProt:
A0A6J1VQC6
LinkDB
All DBs
Position
Unknown
AA seq
597 aa
AA seq
DB search
MEQVTEGTWESLPVELSPGVLQALRELRFSHMTPVQSATIPLFMTNKDVAAEAVTGSGKT
LAFVIPLIEILLRREEKLKKMQIGALIITPTRELAIQINEVISHFIKCYPQFSQCLLIGG
KNPMEDVERFKEQGGNILVATPGRLEDMFRRKSEGLDLAKAVKSLDILVLDEADRLLDMG
FEASLNTILDFLPKQRRTGLFSATQTQEVENLVRAGLRNPVRISVKEKGMAASNTQKTPT
RLQNYYMVSSVLXXXXDEKFNQLVHFLRQHKPEKHLVFFSTCACVEYYGKALESLIKNVK
IMCIHGKMKHKRNRIFTEFRKLPSGILVCTDVMARGIDIPEVNWVLQYDPPSSASAFVHR
CGRTARIGHLGSALVFLLPMEEAYIRFLAINQKCPMEELRPQRNVTDVLPKLKSLSLTDR
AIYEKGMKAFVSCVQAYAKHECNLIFRIKDLDFASLARGFALLKMPKMPELKWKDHSGFT
PVDIDTDSIAFKDKNRERQRQKLLEQWKADGPVRRMGRKTPRNQPWSKQKAKKEKKRKLV
AKRKREEGSDLDNEDMEELLNDTRLLKKLKRGKISEKEFEKTLLGGRKGGSGSESEG
NT seq
1794 nt
NT seq
+upstream
nt +downstream
nt
atggagcaggtgacggaggggacgtgggaatcgctgcccgtggagctcagcccgggggtc
ctgcaggctttgcgggagctgcgcttctctcacatgacgcccgtgcagagtgcaacgatc
cctttatttatgactaataaggacgtggcagctgaagcagtaactggcagtggaaaaacg
ctagcatttgtcattcccctcatagaaatacttctccggcgtgaagaaaagcttaaaaaa
atgcagattggtgctcttatcatcactcccacaagagagcttgctatccaaataaatgaa
gtgatctcccatttcattaaatgttacccacagttcagtcagtgccttttgattggtggg
aaaaatccgatggaagatgtagaaagattcaaagaacaaggtggaaacatcctcgtggcc
accccaggtcgtttggaggacatgttcaggaggaaatcagagggcctggatttggccaag
gctgtaaaatctctggatattttggtcttggatgaagcagatcggttactggacatgggg
ttcgaagcaagtttgaatactatcctggattttctgcccaagcagagacggacagggctc
ttctctgcaactcagacccaagaggtggaaaacttagtgagagcaggactccgaaacccc
gtccggatctcggtgaaggagaaaggaatggcagcgagcaacacccagaagactcccact
cggctccaaaactattacatggtgagctccgttcttgnnnnnnnnnncgacgagaaattt
aaccagctggttcacttccttcgtcaacacaaaccagaaaagcatcttgtctttttcagt
acctgtgcttgcgtggaatattatgggaaggctttggagtctttgattaagaatgtgaaa
atcatgtgcatccacggaaagatgaaacacaagaggaacaggatctttacagagttccgg
aaacttccaagcggcatcctggtgtgtaccgacgtgatggcccgtggcatagacatccca
gaggtgaactgggttttgcagtacgacccgccaagcagcgcaagtgccttcgtgcatcgc
tgcggccgcacggcccgtatcggccacctgggcagtgccctcgttttcttacttcctatg
gaagaggcttacatccgtttcctggccattaaccaaaagtgccccatggaggaactgaga
ccgcagaggaacgtcacggatgtcctccctaagctgaagtcgctgagtctgactgaccga
gccatatatgaaaaagggatgaaggcgtttgtctcttgcgtccaagcctacgccaagcac
gagtgcaacctcatcttccgaataaaagatctggactttgccagcctcgcccgaggtttc
gccctcttgaagatgccaaagatgccggagctgaaatggaaagaccactcgggcttcacc
cccgttgatatcgacacggattcgatcgcgttcaaagacaagaacagggaaaggcagagg
cagaagctgctggagcaatggaaggcagacggccctgtccgcagaatggggaggaagacg
ccccgaaatcagccttggtccaagcagaaagccaagaaggagaagaaaaggaaattggta
gcgaaacggaaaagggaggagggttctgaccttgacaacgaggatatggaggagcttctg
aacgatacccggcttttgaaaaaactcaaaaggggtaaaatcagcgagaaggagtttgag
aagacgctgctgggcggtaggaaaggaggaagcggctcggagtcagaaggataa
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