Notechis scutatus (mainland tiger snake): 113425271
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Entry
113425271 CDS
T09026
Symbol
USP42
Name
(RefSeq) LOW QUALITY PROTEIN: ubiquitin carboxyl-terminal hydrolase 42
KO
K11855
ubiquitin carboxyl-terminal hydrolase 36/42 [EC:
3.4.19.12
]
Organism
nss
Notechis scutatus (mainland tiger snake)
Brite
KEGG Orthology (KO) [BR:
nss00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
nss01002
]
113425271 (USP42)
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
nss04121
]
113425271 (USP42)
Enzymes [BR:
nss01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
113425271 (USP42)
Peptidases and inhibitors [BR:
nss01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
113425271 (USP42)
Ubiquitin system [BR:
nss04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
113425271 (USP42)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UCH
UCH_1
PilJ_C
Motif
Other DBs
NCBI-GeneID:
113425271
NCBI-ProteinID:
XP_026543136
UniProt:
A0A6J1VJC4
LinkDB
All DBs
Position
Unknown
AA seq
1205 aa
AA seq
DB search
MTIVDKTTESSKASPSEKQPFNSVAPASGDMDSGSTGWVAVSSSLEAPKHKISLEPVPGA
AVYSSTSGPDKCKPSAKELVIGDGIAAPQKVLFPAEKICLKWQKMHRVGAGLQNLGNTCF
LNSALQCLTYTPPLANYMLSYEHSKTCHEQGFCMMCTMQGHINQALSNSGTVIKPMSVIN
ELRRIAKHFRFGNQEDAHEFLRYTVDAMQKACLNGSNKLDRHTQATTFIHQIFGGYLRSR
VKCMNCKGVSDTFDPYLDITLEIKSAQSVNKALEQFVKPEQLDGENAYKCSKCKKMVPAS
KRFTIHRASNVLTLSLKRFANFSGGKITKEVKYPEYLDIRPYMSQPNGEPIIYALYAVLV
HTGFSCHAGHYYCYIKASNGQWYQMNDSTVSNSDIRTVLNQQAYVLFYIRTHDLKNGAEH
IHSVHTPGQSSPRPVINQRVIGNKQSNPGFIGPQLPPHMVKNSNHLNGTGSLKETPSSTA
AISSNASLVKSSSAPSLSISKWTMNRSATAGPPDSSKKPKLTLSIHNNKLPTRQTISHPS
CTLESLNKPAPSSTISNPSAAQSTSSTSTVSSAANQVSKPSSPGKSASKLIMNGKAKHSP
SLLVPYGAESSEESEEESKGLLKENGHVKVSNGILLEDAAGGLEDSCTPCHKPEKESSQP
ELPQNITVMVSISLNDAPKQNRQMGSDPTSQGKPVKLADHPFPKTNGLPGKGSPKALSSV
PEEDVSDSFRYKQSKTLPGDSSSPPEPEKPMAEDASEKAPGALPNSIPSPVIFSDPNVTA
TTKDSCERIAQTENRPLENDRQHGSPGTDEAASPGEGDSQERAGVSKDEKAASEKSPEPA
EGQAGPPETPDPQSTQMRLDGESRPQNLKTPLKAPETGPERQGSPPSGKDPPCAENSPLP
QPKTPAESQSSKTEQSKPADSVEPLRRSLEKPGPKEKAHGYKKTDQEYYRPKRKRSETEE
EEEAEEEADGAGGRSQPDGHCSKQRCAYSRERGKQQEQPRREYHGTSYYRFPGSPDPARS
LGKYPPYRPRSRGQTDSERSRPSYGKGGERSWSRERHYQETPRRWDACRSYSYYYSASHV
PRHNQERKPTHSERDYSKSSHVYSSPYSKYDYYKSRLSHNLDRKKHVSLSPEASDCAPEK
KPPKILPDPSLDELKGRKRKKSKKKKKLKDKHKEKESRXAKDTVGELLHCSGLSCHIWTS
SLRQK
NT seq
3618 nt
NT seq
+upstream
nt +downstream
nt
atgaccatagttgacaagacgaccgagtcctccaaggcctctccttctgagaagcaacct
ttcaactctgtggcacctgcttccggtgacatggactcagggtctacaggatgggtggct
gtctcttcttcgctagaggctccgaaacacaagatctcattggagccagtgccgggagcc
gcggtgtattccagtacatcgggaccagataaatgcaagccttccgccaaagagctggtt
attggtgatgggattgcagcgcctcagaaggtcctttttccggcagagaagatttgctta
aaatggcaaaagatgcatcgggttggagctggtctccaaaacctcggcaacacctgtttc
ctgaactctgctttgcagtgtctgacgtacacccctcccctcgccaattacatgctctcc
tacgaacactccaaaacctgtcacgaacaaggattttgcatgatgtgcaccatgcaggga
cacatcaaccaagctctgtccaattccggcactgtcatcaagccaatgtccgtcatcaac
gaactcagacgaatagcaaaacatttccgtttcggtaaccaggaagatgctcacgaattc
ctaagatacacggttgatgctatgcagaaagcctgtttgaacggtagcaacaaattggac
agacatacccaagccaccacttttattcatcagatatttggaggatatctcagatctaga
gtaaaatgcatgaattgcaaaggtgtttcggatacatttgatccctatttggatattaca
ttggaaataaagtcagctcaaagtgtcaacaaagctctggaacagtttgtcaagcctgaa
cagctggatggagaaaatgcatataaatgtagcaagtgtaaaaaaatggttcctgcatcc
aagcggtttacgatacaccgggcatcaaatgtcctcaccttgtccctcaaacggtttgca
aatttcagtggtggcaaaatcacaaaggaagtgaaatacccagaatatttagatatccga
ccatatatgtcccaacccaatggagaaccaatcatttatgcactttatgcagtgctagtc
catacgggcttcagctgtcatgctggacattattactgctacataaaggccagtaacggg
cagtggtaccagatgaatgattccactgtttcaaacagtgacatcaggactgtattaaat
caacaagcctatgtgctgttttacatcaggacccatgacttgaaaaacggtgccgaacac
attcattcggtccacacgccggggcagtcttctccccgaccggttatcaatcaacgggtg
atcggtaataaacaaagtaaccctggatttatcggacctcagctccctccacacatggtg
aagaattcgaatcatttgaacggaaccggatccctgaaggaaacccccagcagtacggcg
gccatttctagcaacgcttccctcgtcaaatcttcttcggcgccttccttgtccatctcc
aagtggaccatgaaccgctcggccacggcgggccccccggattcctccaagaagcccaaa
ctcaccctcagtattcacaacaacaagctgcccactcgccaaaccatctctcaccccagc
tgcaccttggagagcctcaacaagcccgccccgtcctccaccatttccaacccttccgcg
gcgcaatctacctcaagtacttccaccgtctcctcggctgctaatcaagtctccaaaccg
tcctccccgggcaagtccgcttccaagctgatcatgaacggcaaggccaaacacagtccc
agcctcttggttccctacggagcagaatcctcggaagaatcggaggaggaatccaaaggg
ctgttgaaggagaatggccacgtcaaagtgtccaacggcattttactagaagacgcggcc
ggcgggctggaggactcgtgcacgccctgccacaagccggagaaagaaagttcccagccc
gagttgcctcaaaacataaccgtcatggtctccattagcctaaacgacgccccgaagcag
aacagacaaatgggcagcgatcccacctctcaagggaagcccgtgaaactggcggatcac
ccgtttcccaaaaccaacggattgcccggaaaaggttctccgaaagctttgtcctcagtc
cctgaagaagacgtctccgattccttcagatataagcagtcaaaaaccttgcctggggac
tccagcagccctcctgaaccagaaaagcccatggccgaggatgcttctgaaaaggccccc
ggtgcccttcccaacagtatcccaagccccgtaatattttcggaccccaacgtcactgcg
accacgaaggactcttgtgaaaggattgcccagacagaaaacaggccgcttgagaacgac
cggcaacacggttccccaggaacagatgaagcagcctctcctggagaaggggacagtcaa
gaaagggcaggggtatccaaagacgagaaagcagcttcagagaagagcccagagcctgct
gaaggacaggcaggaccgccagaaacaccagacccccagagcacccagatgaggttggac
ggtgaatctaggccccaaaatctgaagactcccctaaaggcacccgagacgggtccggaa
aggcagggcagccctccgagcggcaaggaccccccgtgtgccgagaattctccccttccc
caacccaaaactcctgccgagagccagagttcaaagacggaacaaagcaaaccagcggac
agcgtcgagccgcttcgaagaagccttgaaaagccgggcccgaaggagaaagcccacggt
tacaaaaaaaccgaccaagaatattatcgtcctaaaaggaagcgttctgaaacggaggaa
gaagaggaggcggaggaggaggccgacggggctggtggacggagccagcctgatggacac
tgcagtaagcagaggtgcgcttacagtagggagcgagggaagcagcaggagcagccccgg
cgggaataccacggcaccagctactacaggttcccgggtagtcccgatcccgccaggagt
ttggggaagtaccctccctacagaccccgcagccgaggtcaaacggactctgaacggagc
aggcccagttacgggaaagggggagagaggtcgtggagcagggagcggcactaccaggag
acgccgaggaggtgggatgcgtgccggtcgtacagttactactactcggcctcccacgtg
ccccggcataaccaggagaggaagccgacccactccgagagagactatagcaaatcaagt
catgtttacagtagcccctatagtaagtatgattattacaaaagccgtttgagccacaac
ctcgataggaaaaagcacgtttccctaagtcccgaggccagcgactgcgcccccgaaaag
aaaccccccaaaatcttgccagacccttctctcgacgaactaaagggacggaagcggaag
aagtccaagaagaagaagaagttaaaagataaacacaaggagaaagagtccaggtgagca
aaggacacggtgggagagttacttcattgctcaggtttgtcctgccatatctggacttct
agcctgcgccagaagtaa
DBGET
integrated database retrieval system
