Notechis scutatus (mainland tiger snake): 113425283
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Entry
113425283 CDS
T09026
Symbol
PMS2
Name
(RefSeq) mismatch repair endonuclease PMS2
KO
K10858
DNA mismatch repair protein PMS2
Organism
nss
Notechis scutatus (mainland tiger snake)
Pathway
nss03430
Mismatch repair
nss03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
nss00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
113425283 (PMS2)
03460 Fanconi anemia pathway
113425283 (PMS2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
nss03400
]
113425283 (PMS2)
DNA repair and recombination proteins [BR:
nss03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
MutL homologs
113425283 (PMS2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MutL_C
DNA_mis_repair
HATPase_c_3
HATPase_c
Motif
Other DBs
NCBI-GeneID:
113425283
NCBI-ProteinID:
XP_026543153
UniProt:
A0A6J1VRA2
LinkDB
All DBs
Position
Unknown
AA seq
853 aa
AA seq
DB search
MEAPPVVEKTIKPIDRRSVHQICSGQVVLNLCTAVKELVENSLDAGATNVEVKLKDYGAG
LIEVSDNGCGVEEDNFAGLTLKHYTSKIQDFSDLINVETFGFRGEALSSLCALSNVSIVT
CHKSSNIGTRLEFDHSGKITRKVPFSRPQGTTVSVQQLFHTLPVRHKEFQRNIKKEFAKM
VQILQAYCIICTGVRINCTNQVGQGKKQAVVSTSGSSTLKENIGAIFGHKQVQTLIPFVQ
LLPSEEVCEEYGLNVSALPTKLYTIAGFVSQCNHGDGRSATDRQYFFINQRPCDPGKVSK
VVNEVYHMYNRHQYPFIVLNVCAESGCVDINVTPDKRQILLQEEKLLLAILKTSLMAMFG
SDVNKLVVNQKLTYVEGNLESFLRNEKEVSPLESSTSPLPPNRGEKSEIIARLKESFSRG
KTSAFQETEKAQPKHRPANQGMFQMFAAFSASPRKKILPSEESEDGSKVDSGDSMFAGRK
LEKSNEDTDSGLGSVSAESDGGLSTPETGVHFRAESAVGSSNREPRCLGAEIQSSECGSS
GLSCPSEPNRSEEDGFSQRATSPPKAKRFKILQSLSPKANLSAATPEQDSGAQPLYDIPV
KMEKRTVPLAFSWSTLTDRIQRQIKRQETEGEMLKFRQFKAKISPEENKMAEDELRKEIR
KEMFAKMDIVGQFNLGFIIAKLKSDLFIIDQHATDEKYNFEMLQEHTVLQGQKLIQPQNL
NLTAVSESILMDNLEIFQKNGFDFVVDENAPVTQRVKLISLPTSKNWTFGPQDVEELIFM
LSDSPGIMCRPSRVRQMFASRACRKSVMIGTALTAGEMKKLISHMGEIEHPWNCPHGRPT
IRHLVNLDLITQE
NT seq
2562 nt
NT seq
+upstream
nt +downstream
nt
atggaagctcctccagtagtggaaaaaactatcaagccaatcgatcgcagatcagttcat
cagatctgctcaggccaagtggtgctgaatctatgtactgctgtaaaagagctggtggaa
aacagcctcgatgctggcgctactaacgtcgaagtgaagcttaaagattatggagcgggt
cttattgaagtctctgataatggttgtggtgtagaagaggataactttgcaggcttgacg
ctgaaacattatacttccaagatccaagacttctctgacctcatcaacgtggaaacgttt
ggttttcgaggtgaagctctgagctctctgtgcgcattaagcaatgtttccattgtcact
tgtcacaagtcttccaatattgggacccggctggagtttgatcacagcgggaagatcact
cggaaagtcccattctcccggccacaggggaccaccgtcagtgtccagcagctgtttcat
actttgccggttcgacacaaagaatttcagcgtaacataaagaaggagtttgccaaaatg
gtccagatactgcaagcatattgtatcatttgcactggggttcgcattaactgcaccaac
caagttggccaaggaaagaaacaggctgtggtgtccaccagcggaagttctactttaaaa
gaaaacattggtgccatatttggacacaaacaggtgcaaaccctgattcccttcgtacag
ctgctgcccagcgaagaagtctgcgaagaatacggcttgaatgtttctgctctacccact
aagctttataccatcgcaggatttgtttcgcagtgcaatcatggtgatgggaggagcgca
acggataggcagtacttttttattaaccagcggccgtgcgaccccggaaaggtttccaaa
gttgtaaatgaggtctatcatatgtataacaggcaccaatatccattcattgttcttaac
gtctgtgcagaatctggatgcgtggacatcaacgtgactccggataaaaggcagatcttg
ctccaggaagaaaagcttttattagcaattctaaaaacatcactgatggcgatgtttggc
agtgacgttaataaattggtggtgaatcaaaagctgacctatgttgaagggaacttggaa
agcttcctccgaaacgagaaagaagtgtctcctttggaatcgtctaccagtcctttgcct
ccaaatcggggtgagaaatcagaaataattgctcgtctgaaggaatcattttctcgaggg
aaaacctctgcttttcaggagaccgaaaaggcccaaccgaaacacaggcccgccaaccaa
ggaatgttccagatgttcgccgctttctccgcctctccccgaaagaaaattcttcccagc
gaggaatctgaagacggaagcaaggtggattctggggattccatgtttgcaggcaggaag
ttggagaaatcgaatgaagatacggactctggtttggggagcgtctccgccgagtctgat
gggggtttgagcaccccagaaacgggcgtccattttagagccgaaagcgctgtgggttct
tccaatcgagagccccgttgtttgggcgcagaaatccagagcagcgaatgtggatctagc
ggcctttcctgcccctccgaaccaaaccggagtgaagaagatggcttctctcaacgagcc
acttcaccccctaaagcaaaacgttttaagatccttcagtctctttcaccaaaagccaat
ttatcagcagcaacccctgagcaggattctggcgcgcagcccttgtacgacatcccagtc
aaaatggaaaagaggacggtgcctttagccttctcttggagcaccttgacggaccggatc
cagaggcaaattaagcgccaggagaccgaaggagaaatgttgaaattcagacaattcaag
gcaaagattagcccggaagaaaacaaaatggcggaggatgaattaagaaaggaaataagg
aaagagatgtttgctaaaatggatatcgttggccagtttaatctggggtttatcatcgcc
aagctgaaatcggacctcttcatcatcgatcagcacgctaccgacgaaaaatacaacttt
gagatgctgcaagaacacacggtcctgcaggggcagaagctgatccagcctcaaaatctt
aatttaactgctgtgagtgaaagtatcttgatggataatctggagattttccaaaaaaat
ggatttgattttgtggttgatgaaaacgctcctgtaactcagagagtgaagctcatatct
ttaccaaccagcaaaaactggacttttggtcctcaggacgtagaagaattgatctttatg
ttaagcgattctccgggaatcatgtgcaggccctccagagtaaggcaaatgttcgcctct
cgagcgtgtcgaaaatccgtgatgattggaaccgccctcaccgccggtgaaatgaagaaa
ctgatttctcacatgggtgaaattgagcatccttggaattgtccgcacggaaggcccacc
atacggcatttagtcaacctggacctcattacacaagagtga
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