Notechis scutatus (mainland tiger snake): 113425317
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Entry
113425317 CDS
T09026
Symbol
APEX1
Name
(RefSeq) DNA-(apurinic or apyrimidinic site) lyase
KO
K10771
AP endonuclease 1 [EC:
3.1.11.2
]
Organism
nss
Notechis scutatus (mainland tiger snake)
Pathway
nss03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
nss00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
113425317 (APEX1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
nss03400
]
113425317 (APEX1)
Enzymes [BR:
nss01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.2 exodeoxyribonuclease III
113425317 (APEX1)
DNA repair and recombination proteins [BR:
nss03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
113425317 (APEX1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Exo_endo_phos
Exo_endo_phos_2
Motif
Other DBs
NCBI-GeneID:
113425317
NCBI-ProteinID:
XP_026543196
Ensembl:
ENSNSUG00000002486
UniProt:
A0A6J1VTA2
LinkDB
All DBs
Position
Unknown
AA seq
315 aa
AA seq
DB search
MSKRENKEEEVLPTTKEVEEPESKKTKKDGEKPEKEADVPILYQDPPDKLTSSSGKKYTL
KVTSWNVDGIRAWFKKKGLEWVNEEDPDVLCLQETKCAEKQLPAKIRDLAKYPHKFWACS
NDKEGYSGVALLSKNKPLDVTYGIGEEEHDKEGRVITAEFPSYFLVTAYVPNAGRGLVRL
EYRQRWDEAFRSYLEGLAARKPLILCGDLNVAHQEIDLKNPKGNKKNAGFTPEERAGFTQ
LLEAGFVDTFRHLYPDTPHAYTFWTYMMNARAKNVGWRLDYFVISKGLLEGLCDSKIRSS
ALGSDHCPITLYVAV
NT seq
948 nt
NT seq
+upstream
nt +downstream
nt
atgtcaaaacgagagaataaagaagaagaggtccttccaacaacgaaagaggtggaagag
ccagaatctaaaaaaaccaagaaagatggagaaaagccagagaaagaggctgatgttcca
attctgtaccaagatccccctgataagctcacctcatccagtggcaaaaaatatactttg
aaggtcacttcctggaatgtagatggcatccgagcctggttcaagaagaagggcctggag
tgggtgaacgaagaggatcccgacgtgctctgcttacaagaaacgaagtgtgcagagaaa
cagctgcctgctaaaattcgggatctggccaaatacccccataaattttgggcctgttcc
aatgacaaggaaggctacagtggcgtggccctgctctccaagaacaagcctctggacgtc
acctatggaattggtgaggaagagcatgataaagaagggcgggtgatcacagcagaattc
ccctcctactttctggtgaccgcctatgtgcccaatgccggtcggggactggtgcgcctg
gaataccgccagcgctgggatgaggccttccgctcttacctggaaggcctggctgcccgc
aagccccttatcctgtgtggggacctcaacgtagcccaccaggagattgatctgaagaac
cccaaagggaataagaagaatgcgggcttcactccagaagagcgggctggtttcacccaa
ctgttagaagctggctttgtcgacactttccgacatctctaccccgacaccccccacgcc
tacactttctggacatacatgatgaatgcccgggctaagaatgtgggatggcggcttgac
tactttgtcatctccaaagggcttctggaagggctgtgtgacagcaagatccgctcctca
gccttggggagtgatcactgtcccatcaccctctatgtggctgtgtaa
DBGET
integrated database retrieval system
