Notechis scutatus (mainland tiger snake): 113425445
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Entry
113425445 CDS
T09026
Symbol
RAD50
Name
(RefSeq) DNA repair protein RAD50
KO
K10866
DNA repair protein RAD50 [EC:3.6.-.-]
Organism
nss
Notechis scutatus (mainland tiger snake)
Pathway
nss03440
Homologous recombination
nss03450
Non-homologous end-joining
nss04218
Cellular senescence
Brite
KEGG Orthology (KO) [BR:
nss00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
113425445 (RAD50)
03450 Non-homologous end-joining
113425445 (RAD50)
09140 Cellular Processes
09143 Cell growth and death
04218 Cellular senescence
113425445 (RAD50)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
nss03032
]
113425445 (RAD50)
03400 DNA repair and recombination proteins [BR:
nss03400
]
113425445 (RAD50)
DNA replication proteins [BR:
nss03032
]
Eukaryotic type
DNA Replication Termination Factors
MRN complex
113425445 (RAD50)
DNA repair and recombination proteins [BR:
nss03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
MRN(MRX) complex
113425445 (RAD50)
BRCA1-C complex
113425445 (RAD50)
NHEJ (non-homologous end-joining)
MRX complex
113425445 (RAD50)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA_23
Rad50_zn_hook
AAA_21
AAA_15
SbcC_Walker_B
SMC_N
AAA_29
DUF2703
AAA_24
Motif
Other DBs
NCBI-GeneID:
113425445
NCBI-ProteinID:
XP_026543386
Ensembl:
ENSNSUG00000004660
UniProt:
A0A6J1VK43
LinkDB
All DBs
Position
Unknown
AA seq
1312 aa
AA seq
DB search
MSKIDKMSILGVRSFGVEDKDKQVITFFNPLTILVGPNGAGKTTIIECLKYICTGDFPPG
SKGNSFVHDPKVANETDVRAQIRLQFRDVNGELVAVQRSMVCSQKGKKTEFKTLEGVITR
IKHGEKVSLSSKCAEMDREMIAALGVSKSVLNNVIFCHQEDSNWPLSEGKALKQKFDEIF
SATRYIKALETLRQVRLKQGQRVKECQVELKYLKQNKEKAQEIQNQLTSRETQLAASKEN
VRHIENQLEPLKNSLMEIEQNLIKVMRLDNESKALESRRKQMEKDNQDLQQKMEKVFQGN
DEQLRRMYQNHQKTVKEKEKRLTECQRELEAVNKEFLRFNTEKSELLVEQGRLQLQADRY
QQHIRTRDSLIQSLATQLELEGFETAPLNERQINSFQRLVKERQDKDMESANNLMKEFGE
KETMKQKQIDEIRDKKTGLERTIVLKLDIQNKKQFEVKNLKQELHQLEGSSNRLLELDQE
LTKAKHELAEAEKNCNVETLEMEIKELQREKTNLDSTLRELDKEMEQLNLNTTVITQMDM
LKKDKADKEDQIRKIKCRHSEELISLLGFFPSKNQLEDWLHSRVKEINQTRDKLAKLNKE
LVSAEQNKGHITTELRKKEEQLSTYEEKLFDVCGSQDFESDLNKLQHDIEKTSKQRAMLA
GATAVYSQFITQLADENQSCCPVCQRVFETEAELQDVINDLQAKLRLAPDKLKTTESELK
KREKKRDDMISLKPIRQTVSELHEKDIPELRNKLQILNREIQSLKADIEEQETLLGTIIT
EEESAKACLQDITLMERDQIDLKYVERKIAQQAAKLQGVDLGRTLLQVSQEKQEKKHQWD
TVTSKIELKQTLKQDQQNQVQHLKCTVNELKAEKLQISSSMQRRQQLEEQTVELTTEVQS
LNREIKDAKEQLFPLETTLGKLQQEKEELSNKKNTSYKITQEKINDIKEKVKNIHNHMRE
IENYIQGGKDEYKQQKESELEKVTVQLIDSEKKKEKINKEMGTIRQDIDTQKIQERWLED
NLTLRKRNEDLKEVEDNIKQLLKEMGEMQVPQLKRNQKHLEEKIEDFKRSHSLALGRQHG
FEEEILRYKRELKEQQFKNAEEKYREMMIIMRTTELANKDLDIYYRALDQAIMTFHSMKM
EEINKIIRDLWRSTYRGQDIDYIEIRSDADENISASDKRRSYNYRVVMTKGDTALDMRGR
CSAGQKVLASLIIRLALAESFCLNCGILALDEPTTNLDRENIESLAHALVEIIKSRSQQR
NFQLLVITHDEDFVELLSRSEYVEKFYRIKKNLDQCSEIVKCSVQTLGSDVH
NT seq
3939 nt
NT seq
+upstream
nt +downstream
nt
atgtctaagattgataaaatgagcattcttggagtgaggagctttggtgtggaggataaa
gataaacaagttatcactttctttaatcctctaactattttggtgggcccaaatggtgct
ggaaaaacgactatcatagaatgcctcaaatatatttgtactggggacttcccacccggc
agcaaaggaaattcatttgtccatgatccaaaagttgccaatgaaacagatgtcagagct
caaataagacttcaatttcgtgatgttaatggagagcttgttgccgtccagcgatccatg
gtatgttctcagaaaggaaagaagacagaatttaaaactcttgaaggagtaattacaaga
ataaagcatggagagaaagtcagtctgagctccaagtgtgcagaaatggaccgagagatg
attgctgcccttggagtttctaagtctgtacttaataatgtcattttctgccatcaagaa
gattccaactggcctctaagtgaaggaaaggctctgaaacagaaatttgatgagatcttt
tcagcaacaaggtatattaaggctttggaaacgcttcgccaggtgcgtctaaaacaaggg
cagagagttaaagaatgtcaggtggagctgaagtacttgaagcagaataaagaaaaagca
caagagatccagaatcagctaactagcagggaaactcagttagctgcctccaaagaaaat
gtcagacatattgaaaaccaactagagcctctaaagaactctttgatggaaatagaacag
aaccttataaaagtaatgagacttgataatgaaagcaaagctctggaaagtcggagaaag
cagatggaaaaggataatcaagacctgcaacaaaaaatggagaaggtttttcaaggaaat
gatgagcaacttagaagaatgtatcaaaaccatcagaaaactgtgaaagaaaaggagaag
cggttaacagagtgtcagcgagaactggaggcagtaaacaaagaattcctaagatttaat
actgaaaaatcagaattattagttgaacaaggtcgtcttcagttacaggcagatcgttac
cagcagcatattagaacccgagattcattaattcagtctttggcaactcagttggaattg
gaaggatttgaaacggcacccttaaatgaaagacaaatcaatagttttcagaggctggta
aaagagagacaggacaaagatatggaaagtgctaataatttaatgaaagaatttggcgag
aaggaaacaatgaagcagaaacaaattgatgaaataagagataaaaaaactggacttgaa
agaacaattgtcctaaagttagatattcaaaataagaaacaatttgaagtaaagaatcta
aaacaggagttacatcaactggaaggctcctcaaatcgactcctagaactggaccaagaa
cttacaaaagcaaaacatgaattagctgaagctgagaaaaattgcaatgttgaaacccta
gaaatggaaattaaggaactgcaaagagaaaagacaaatctggacagtactcttcgggaa
ctggataaagagatggaacaactgaacctgaatactacagttataacccaaatggatatg
ctgaaaaaagataaagctgacaaagaagaccaaatcagaaaaattaaatgtagacacagt
gaagaattaatcagcttgttgggatttttcccaagcaaaaatcagcttgaagattggctt
cactcaagagttaaagaaattaatcagacaagagacaagcttgccaagctcaacaaagaa
cttgtttcagcagaacaaaacaaaggtcatattaccactgaactaaggaaaaaggaggaa
cagctgtccacatacgaagaaaagctttttgatgtctgtggaagtcaagattttgaaagt
gatcttaataaactgcagcatgatattgaaaaaacatccaagcagcgagctatgcttgca
ggagccacagcagtttattcgcagttcatcacacaactagcagacgaaaaccagtcgtgt
tgcccggtgtgtcagagagtctttgaaacggaggcagaactgcaagacgtcataaatgat
cttcaagccaaactgcgccttgctccagacaaactgaagacaacagaatctgaacttaag
aaaagggagaagaaacgggatgatatgatttctctgaaacctatcagacaaacagtatct
gaactccatgaaaaagatatacctgagttgagaaacaagctacagatccttaacagagag
atccaaagccttaaagctgatatagaagaacaggaaaccctcttgggtactatcataaca
gaggaagaaagtgcaaaagcatgtctgcaggatattacacttatggaaagggatcagatt
gatctaaagtatgttgaaagaaaaattgctcagcaggctgctaagctccagggagtggat
ttgggacggactcttttgcaagtgagccaagagaaacaggaaaaaaaacatcagtgggac
acagttactagcaaaattgaactgaagcagacactcaagcaagaccaacaaaatcaagtc
cagcatttaaagtgcacagtaaatgaactcaaagctgagaaacttcagatttccagcagc
atgcagcgtcgacagcaacttgaagaacagactgtagaattaacaaccgaggtgcagtct
ttaaacagagagatcaaggatgcaaaggaacagttatttcctttggaaacaactttggga
aaactacaacaagaaaaagaagagttgtccaacaaaaagaatacaagttacaaaataaca
caagagaagataaatgacattaaagaaaaagttaaaaatatccataaccatatgagagag
attgagaattatatccaaggagggaaagatgaatacaagcagcaaaaggaatctgaactg
gagaaagtcacagttcagctaatagattctgagaaaaagaaagagaagataaataaagaa
atgggaacaattaggcaagatattgatacacaaaagattcaggaacgttggttagaagat
aatcttactttaagaaaaagaaatgaggatctaaaagaagttgaagataacataaaacag
cttttgaaggaaatgggggaaatgcaagtaccacaactgaaaagaaatcaaaaacattta
gaagaaaaaatagaggatttcaaaagaagccatagtttggcacttggtcggcagcatgga
tttgaggaggagatcctgagatataagagagagctgaaagaacaacagtttaaaaatgct
gaagagaaatatagagaaatgatgataattatgaggaccacagaactggcaaacaaagat
cttgacatttactatagagcactggatcaagcaataatgacatttcatagcatgaaaatg
gaagaaattaacaagataattcgtgacctatggcgaagcacatacaggggacaagatatt
gattatatagaaattcggtctgatgctgatgaaaatatctctgcttctgacaaaaggagg
agttacaattacagggtagtcatgacaaaaggagacactgctctagatatgaggggcagg
tgcagtgctggccaaaaggttcttgcctctctcattatccgccttgctctggctgaatcc
ttctgtctcaactgtggtattcttgcattggatgagcctaccaccaatcttgaccgagaa
aatattgaatctcttgcacatgctttggtggagatcatcaaaagtagatctcagcaacgt
aactttcagctgcttgtgataactcatgatgaagattttgtggagctgttgagtcgatct
gaatatgtggagaaattctatagaattaagaagaacctcgaccagtgttctgagattgtg
aaatgcagtgtccaaactttgggatcagatgttcattag
DBGET
integrated database retrieval system
