Notechis scutatus (mainland tiger snake): 113425580
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Entry
113425580 CDS
T09026
Symbol
DHX34
Name
(RefSeq) probable ATP-dependent RNA helicase DHX34 isoform X1
KO
K20101
ATP-dependent RNA helicase DHX34 [EC:
5.6.2.6
]
Organism
nss
Notechis scutatus (mainland tiger snake)
Brite
KEGG Orthology (KO) [BR:
nss00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
nss03019
]
113425580 (DHX34)
Enzymes [BR:
nss01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
113425580 (DHX34)
Messenger RNA biogenesis [BR:
nss03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Other surveillance factors
113425580 (DHX34)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-C2H2_DHX34
Helicase_C
OB_NTP_bind
HA2_C
DEAD
HA2_N
AAA_16
AAA_22
AAA_19
FtsK_SpoIIIE
zf-C2H2_ZNF462_11
Motif
Other DBs
NCBI-GeneID:
113425580
NCBI-ProteinID:
XP_026543577
UniProt:
A0A6J1VK85
LinkDB
All DBs
Position
Unknown
AA seq
1100 aa
AA seq
DB search
MAAEGWDCPATRALLEAAYFPPGCSGQELEDFWAFFRRLRGFCERQGSGAGDRPAYDPGC
RLNLRLPRRVAAGVSPALARRFGLALLRFLDFAQRRSLARLARLQRERAALPIARSRQSL
LAALARSPVVLVAGDTGCGKSTQVPQFLLAAGYSHVACTQPRRLACVALAQRVARESLGR
FGDQVGYQIRFESARSPATRIVFLTEGLLLRQAQREPTLPAYRVLIVDEVHERHLHCDFL
LGVLRRLLDARPDLKLVLMSATINIQLFADYFGGAPVIQVPGRLFPITVIYEPIRPEESS
RGRRERLGVQPFLRVLQAIDHKYPPEERGDLLIFLSGVAEIGAVMEAAQSYAAFTKRWVV
LPLHSTLSVAEQDKVFDLAPPGVRKCIISTNIAETSVTIDGVRFVVDAGKVKELSYDSKA
KLHRLQEFWISRASAEQRKGRAGRTGPGVCYRLYAESDYDNFAPYPVPEIQRVALDALIL
QMKSMGLGDPRAFPFLEPPPWASLEAALGYLKHQGALDSAEALTPIGTLLAQLPVDVVIG
KMLVLGTLLDLAAPTLTIAAVLSVPSPFLHRGGGRSDLNCLAARRSLGSPLGDPLTLLNI
FNAWVQEKAANRRGSQRWCRHRGLEEHRLYEAANLRRQFQELLRDHRLLRPPAQPYSSYA
RQRRRREHRELHRLKREHEQRGGRRRKLLRLQEEEQQQQEGGGGSGFSSGEEEEGSSCLD
IQDVNFQLRHDMEELQAAAREGHGLSTSQLALLQLVLAQGLYPQLAVPDPFNETRKDSEQ
IFHTREKAGLVLHPTSVFADAPELLHSDSKAGKDPDAKERMTSHPQILSFVSLLETHKPY
MVNCLRLPALQVLLLLARSLDTNADCTRIVADSWLELQVPVAETAVRMLGIALRLRASWD
KVLDKCLQRLAGPAGEEEETEAPLSAPEVCQLTHELLGFLKTEAQYSLRRMTSLEQQHLY
GGPQMAPEEAEVLPSFFQGVQLVPHEVKGGYRIGEFLTFNCLAGEGDLYSDCLRSFWTCP
QCGLYMPFTPLERVAHEEACRSPGPQEGPPGCEGPRGGAAETASGTSALQQLYHCAICQN
SLHLTPTEILKHRKQHQGYL
NT seq
3303 nt
NT seq
+upstream
nt +downstream
nt
atggcggcagagggctgggactgccccgccacccgcgccctcctggaggccgcctacttc
ccgccgggctgcagcggccaggagctggaggacttctgggctttcttccggcgcctgcgg
ggcttctgcgagcggcagggctccggcgcgggagaccggccggcctatgaccccgggtgc
cgcctgaacctgcggctgccccggcgagtggctgccggcgtgtccccggcgctagcgcgc
cgcttcggcctagcgttgctccgcttcctggatttcgcgcagcggcggagcttggcccgg
ctggcgcggctgcagcgggagcgcgccgccctgcccatcgcccgctcgcggcagtcgctg
ctggccgccctggcacgcagcccggtggtgctggtggccggggacacgggctgcggcaag
tccacgcaggtgccccagttcctgctggccgccggctactcccacgtggcctgcacccag
ccgcggcgcttggcctgcgtggcgttggcccagcgcgtggcccgcgagagcctgggccgc
ttcggggaccaggtcggctaccagatccgcttcgagagcgcccgctcgccggccacgcgc
atcgtcttcctgaccgaagggctgctcctgcgccaggcccagcgggagcccacgctgccc
gcctaccgggtgctgattgtggatgaggtccacgagcggcacctgcactgcgatttcctg
ctgggcgtcctgcgccggctcttggatgcccgccctgacctcaagttggtgctcatgtct
gccaccatcaacatccagctttttgccgactattttgggggcgcacctgtgatccaggtt
cctggacgcctcttccccatcacggtcatctacgaacccatccgccctgaggaaagcagc
cgtgggcgcagggagcgactgggcgtccagcccttcctgcgggtgctccaggccattgac
cacaagtatccgccggaggagaggggagacctgctcatcttcctcagcggggtggctgag
attggggcagtgatggaggccgcgcagtcttacgcggccttcaccaagcgctgggtggtc
cttcctcttcacagcaccctctctgtggccgagcaggacaaggtctttgaccttgctcca
ccaggagtccggaagtgcatcatttccaccaacattgcggagacttctgtgaccatcgat
ggggtccggtttgttgtggatgcaggaaaggtgaaagagctgagctatgactccaaggcc
aagttacatcgcctccaggagttctggatcagccgagccagtgctgagcaacgcaagggc
cgggcaggccgcactgggcccggggtctgctaccgcctctacgctgaatcagactatgac
aattttgccccctacccagtgccagagatccagcgggtggccctggatgccctgatttta
cagatgaagagcatggggctaggcgatccccgagcgttccctttcctggagccacctcct
tgggccagcctggaggcagccctgggctatctaaagcatcagggtgccctggattcagca
gaggccctaacacccattgggactctcttggctcagctgccagttgatgtggtgattggg
aagatgctagtgttggggacgctcctggacctggctgccccgacactcaccattgccgct
gtcctcagcgtgccctctcccttcctgcacaggggcggggggcgcagcgacctgaactgc
ctggcagcccggcgaagcctggggagcccactgggagaccccctgacccttctgaatatc
ttcaacgcctgggtccaggagaaagcggccaatcgccgaggatcccagcggtggtgccga
catcggggcctggaggaacatcggctctacgaggcggccaatctgcggcgccagtttcag
gaattgctgcgggaccaccgactgctgcgccctcctgctcagccttacagctcctacgct
cgacagaggaggaggcgggaacatcgagagctgcacagactcaagcgggagcatgagcag
cggggtgggcgccggcggaagctgttgcggctgcaggaggaggaacagcagcagcaggaa
ggaggaggagggtccggtttttcatctggggaagaggaggagggtagttcctgcctagac
atccaggatgtgaatttccagctgcgacatgatatggaggagctgcaggcagctgcccgt
gaaggccatgggctctccaccagccagctggctctgctgcagctggtgctggctcagggc
ctttatcctcagctggctgtccccgaccctttcaacgagacccgcaaggattcggaacag
atcttccacacaagagagaaagcaggccttgtcctgcacccgaccagtgtgtttgctgat
gccccagaactgctgcattcggactccaaggctggcaaggacccagatgccaaggagagg
atgaccagccacccccaaatcctgtccttcgtctcactgctggagacccacaagccctac
atggtaaactgtctccgcctgccagcactgcaggtgttgctgcttttggctcgctctctc
gataccaacgctgactgcacgcgcatagtggctgactcctggcttgagcttcaagtcccc
gtggcagagacggccgtgcggatgcttggcattgccctgcgcctccgggcctcttgggac
aaagtgttggacaagtgtctgcaaagattggcaggcccggctggggaggaggaagagaca
gaggcaccactcagcgccccagaggtgtgccaactcacacacgaactgttgggcttcctg
aagacggaggcccagtacagcctccgccgaatgacctctctggagcagcagcacctctat
ggaggccctcagatggcacctgaggaggctgaagtgctgcccagcttcttccagggggtg
cagctggtgccccacgaggtgaaaggtggctacaggattggcgagttcctgacatttaat
tgtctggcaggggagggagatctgtacagtgactgcctgcgcagcttctggacgtgccca
caatgtgggctctacatgcccttcactcctctggagcgtgtggcccatgaagaggcctgc
cggtctcctggccctcaggaggggccccccggctgcgaagggcccagagggggcgcagcg
gagactgcctctggcacctctgccctgcagcaactctaccactgtgccatctgccagaac
agcctgcacctcacacccacagaaatcctgaagcatcggaagcagcatcaggggtacttg
tga
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